BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1448.p (502 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum ser... 914 0.0 ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium ... 793 0.0 ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae ba... 792 0.0 ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arse... 787 0.0 ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivo... 786 0.0 >ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum seropedicae SmR1] gb|ADJ63578.1| replicative DNA helicase protein [Herbaspirillum seropedicae SmR1] Length = 478 Score = 914 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 474/478 (99%), Positives = 478/478 (100%) Query: 25 MKESSRGNPEFFRGQRESSDPQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 84 MKESSRGNPEFFRGQ+ESSDPQ+DALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE Sbjct: 1 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 60 Query: 85 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 144 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN Sbjct: 61 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 120 Query: 145 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 204 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG Sbjct: 121 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 180 Query: 205 FMEIQPLLTQVVERIDELYNRDNTSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 264 FMEIQPLLTQVVERIDELYNRD++SDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK Sbjct: 181 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 240 Query: 265 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 324 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL Sbjct: 241 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 300 Query: 325 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 384 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN Sbjct: 301 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 360 Query: 385 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 444 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL Sbjct: 361 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 420 Query: 445 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 502 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD Sbjct: 421 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 478 >ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium sp. Marseille] gb|ABR88333.1| replicative DNA helicase [Janthinobacterium sp. Marseille] Length = 461 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 410/460 (89%), Positives = 439/460 (95%), Gaps = 3/460 (0%) Query: 43 SDPQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 102 +DPQL++LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV+ +DFYRYDHRIIF+HIVKLI Sbjct: 5 ADPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVNHDDFYRYDHRIIFQHIVKLI 64 Query: 103 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 162 N+ +PADVITV+EA++ SGKAEEVGG+ YLNALAQNTPSAANIRRYAEIVRDRG+LRKLI Sbjct: 65 NNARPADVITVFEALTNSGKAEEVGGVAYLNALAQNTPSAANIRRYAEIVRDRGVLRKLI 124 Query: 163 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 222 TV+DEISGNAFNPQGK+VK MLDEAESKIFAIAEEG+RG+QGF EIQPLLTQVVERIDEL Sbjct: 125 TVSDEISGNAFNPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQVVERIDEL 184 Query: 223 YNRDNTSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 282 YNRD+TSDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAIESGLP Sbjct: 185 YNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIESGLP 244 Query: 283 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 342 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRL DEDWPRLTHAIQKMNDAQ YIDETP Sbjct: 245 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLADEDWPRLTHAIQKMNDAQLYIDETP 304 Query: 343 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 402 AL+ IELRARSRRL+RQCGKLGLIIIDYLQLMS N S+ ENRA+EISEISRSLKGLAKE Sbjct: 305 ALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSAN--SAGENRATEISEISRSLKGLAKE 362 Query: 403 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 462 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 422 Query: 463 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 502 EIIIGKQRNGPIG++RL+FLG YTK++NY G+ A Y GD Sbjct: 423 EIIIGKQRNGPIGAVRLTFLGQYTKFENYTGSAAL-YQGD 461 >ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30578.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] Length = 483 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 417/474 (87%), Positives = 441/474 (93%), Gaps = 5/474 (1%) Query: 29 SRGNPEFFRGQRESSDPQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYR 88 S P+F R D QLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYR Sbjct: 15 SDSRPDFRSDSR--PDIQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYR 72 Query: 89 YDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRY 148 YDHR+IF+HIVKLIN +KPADVITV+E+++++GKAEEVGGL YLNALAQNTPSAANIRRY Sbjct: 73 YDHRLIFQHIVKLINGSKPADVITVFESLTSTGKAEEVGGLSYLNALAQNTPSAANIRRY 132 Query: 149 AEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEI 208 AEIVRDRG+LRKLITVADEISG AFNPQGK+VK MLDEAESKIFAIAEEGSRG+QGF EI Sbjct: 133 AEIVRDRGVLRKLITVADEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEI 192 Query: 209 QPLLTQVVERIDELYNRDNTSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFS 268 QPLLTQVVERIDELYNRDN SDITGVPTGF DLDKMTSGLQPGDLIIVAGRPSMGKTAFS Sbjct: 193 QPLLTQVVERIDELYNRDNQSDITGVPTGFADLDKMTSGLQPGDLIIVAGRPSMGKTAFS 252 Query: 269 INIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAI 328 INIGE+VAI++GLPVAVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAI Sbjct: 253 INIGENVAIDTGLPVAVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAI 312 Query: 329 QKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASE 388 QKMNDAQ YIDETPAL+ IELRARSRRL+RQCGKLGLIIIDYLQLMSGN S+ ENRA+E Sbjct: 313 QKMNDAQLYIDETPALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSGN--SAGENRATE 370 Query: 389 ISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYR 448 ISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYR Sbjct: 371 ISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYR 430 Query: 449 DEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 502 DEVYNPDSPDKGTAEIIIGKQRNGPIGSIRL+F G YTK+DNY GN A YGGD Sbjct: 431 DEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLTFQGQYTKFDNYTGN-APLYGGD 483 >ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arsenicoxydans] emb|CAL62295.1| Replicative DNA helicase [Herminiimonas arsenicoxydans] Length = 461 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 409/460 (88%), Positives = 436/460 (94%), Gaps = 3/460 (0%) Query: 43 SDPQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 102 +DPQ+D+LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYRYDHRIIF+HIV+LI Sbjct: 5 ADPQVDSLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYRYDHRIIFQHIVRLI 64 Query: 103 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 162 N ++PADVITV+EA++ SGKAEEVGG+ YLNALAQNTPSAANIRRYAEIVRDRGILRKLI Sbjct: 65 NGSRPADVITVFEALTNSGKAEEVGGVSYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 124 Query: 163 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 222 TV+DEISG AFNPQGK+VK MLDEAESKIFAIAEEGSRG+QGF EIQPLLTQVVERIDEL Sbjct: 125 TVSDEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEIQPLLTQVVERIDEL 184 Query: 223 YNRDNTSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 282 YNRD+TSDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAIESGLP Sbjct: 185 YNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIESGLP 244 Query: 283 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 342 VAVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAIQKMNDAQ YIDETP Sbjct: 245 VAVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAIQKMNDAQLYIDETP 304 Query: 343 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 402 AL+ IELRARSRRL+RQCGKLGLIIIDYLQLMS N SS ENRA+EISEISR+LKGLAKE Sbjct: 305 ALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSAN--SSGENRATEISEISRNLKGLAKE 362 Query: 403 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 462 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 422 Query: 463 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 502 EIIIGKQRNGPIGS+RL+FLG YTK++NY G+ A Y GD Sbjct: 423 EIIIGKQRNGPIGSVRLTFLGQYTKFENYTGSAAL-YQGD 461 >ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivorans Ter331] gb|AEK62309.1| Replicative DNA helicase [Collimonas fungivorans Ter331] Length = 466 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 404/463 (87%), Positives = 437/463 (94%), Gaps = 2/463 (0%) Query: 40 RESSDPQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIV 99 + SDPQLD+LRVPPHSIEAEQSVLGGLLLDNAAWD+IADFVSA+DFYRYDHRIIF+H+V Sbjct: 6 KAPSDPQLDSLRVPPHSIEAEQSVLGGLLLDNAAWDKIADFVSADDFYRYDHRIIFQHMV 65 Query: 100 KLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILR 159 KLIN +KPADVITV+E++S +GKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDRG+LR Sbjct: 66 KLINGSKPADVITVFESLSGTGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGVLR 125 Query: 160 KLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERI 219 KLITVADEISG AF+PQGK+VK MLDEAESKIFAIAEEG+RG+QGF EIQPLLTQVVERI Sbjct: 126 KLITVADEISGQAFSPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQVVERI 185 Query: 220 DELYNRDNTSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIES 279 DELYNRDN SDITGV TGF+DLDKMTSGLQ GDL+IVAGRPSMGKTAFS+NIGE+VAIES Sbjct: 186 DELYNRDNQSDITGVSTGFIDLDKMTSGLQKGDLVIVAGRPSMGKTAFSVNIGENVAIES 245 Query: 280 GLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYID 339 GLPVA+FSMEMGG QLAMRMLGSVG+LDQHRLRTGRL DEDWPRLTHAIQKMNDAQ +ID Sbjct: 246 GLPVAIFSMEMGGTQLAMRMLGSVGKLDQHRLRTGRLNDEDWPRLTHAIQKMNDAQLFID 305 Query: 340 ETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGL 399 ETPALS IELRAR+RRL+RQCG LGLIIIDYLQLMS N ++ ENRA+EISEISR+LKGL Sbjct: 306 ETPALSSIELRARARRLSRQCGTLGLIIIDYLQLMSAN--NAGENRATEISEISRNLKGL 363 Query: 400 AKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDK 459 AKEL CPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDS +K Sbjct: 364 AKELQCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSQEK 423 Query: 460 GTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 502 GTAEIIIGKQRNGPIGS+RLSF+G YTK+DNY GNL PYGGD Sbjct: 424 GTAEIIIGKQRNGPIGSVRLSFIGQYTKFDNYAGNLDAPYGGD 466