BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1444.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775481.1| SOS-response transcription repressor [Herbas... 372 e-101 ref|YP_001100423.1| LexA repressor [Herminiimonas arsenicoxydans... 334 5e-90 ref|YP_001352990.1| LexA repressor [Janthinobacterium sp. Marsei... 333 1e-89 ref|YP_004753137.1| SOS-response repressor and protease LexA [Co... 332 2e-89 ref|ZP_08276514.1| SOS-response repressor and protease LexA [Oxa... 325 3e-87 >ref|YP_003775481.1| SOS-response transcription repressor [Herbaspirillum seropedicae SmR1] gb|ADJ63573.1| SOS-response transcription repressor (RecA-mediated autopeptidases) protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 200/218 (91%), Positives = 209/218 (95%), Gaps = 2/218 (0%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP Sbjct: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 GTSRGIRLRE G G + +RQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP Sbjct: 61 GTSRGIRLREPG--GQAASRQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 118 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 AMF KPDYLLKVRGMSMRDAGILDGDLLAVR+ DQARNGQIVVARLADEVTVKRYQK+G Sbjct: 119 AMFSGKPDYLLKVRGMSMRDAGILDGDLLAVRKTDQARNGQIVVARLADEVTVKRYQKTG 178 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRSWN 218 SVITLFPENP+F+PIIVKP ++QFALEGLAVGL+RSWN Sbjct: 179 SVITLFPENPDFKPIIVKPNEEQFALEGLAVGLMRSWN 216 >ref|YP_001100423.1| LexA repressor [Herminiimonas arsenicoxydans] sp|A4G713|LEXA_HERAR RecName: Full=LexA repressor emb|CAL62300.1| LexA repressor [Herminiimonas arsenicoxydans] Length = 219 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 173/219 (78%), Positives = 197/219 (89%), Gaps = 1/219 (0%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M+KLTARQEQILNLI++AIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP Sbjct: 1 MIKLTARQEQILNLIRDAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 Query: 61 GTSRGIRLRE-SGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVD 119 GTSRGIRLR+ GT + Q++LPHPALMQL+LPL+GRVAAGSPILAQEH+E TY VD Sbjct: 61 GTSRGIRLRDMGGTRSDRSGAQLSLPHPALMQLNLPLVGRVAAGSPILAQEHIEATYNVD 120 Query: 120 PAMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKS 179 ++F AKPD+LLKVRGMSMRDAGILDGDLLAV++ D A+NGQIVVARL D+VTVKRY+K+ Sbjct: 121 KSLFSAKPDFLLKVRGMSMRDAGILDGDLLAVKKIDSAKNGQIVVARLGDDVTVKRYKKT 180 Query: 180 GSVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRSWN 218 GS+I L PENP+F+PI V E D FALEGLAVGL+R+WN Sbjct: 181 GSLIELLPENPDFQPIRVDLEHDDFALEGLAVGLMRTWN 219 >ref|YP_001352990.1| LexA repressor [Janthinobacterium sp. Marseille] sp|A6SXJ3|LEXA_JANMA RecName: Full=LexA repressor gb|ABR89890.1| LexA transcription regulation repressor [Janthinobacterium sp. Marseille] Length = 219 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 176/219 (80%), Positives = 195/219 (89%), Gaps = 1/219 (0%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M+KLTARQEQILNLI++AIENTGFPPTRAEIA ELGFRSANAAEEHLQALARKGAIEISP Sbjct: 1 MIKLTARQEQILNLIRDAIENTGFPPTRAEIATELGFRSANAAEEHLQALARKGAIEISP 60 Query: 61 GTSRGIRLRESGTTGIS-TARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVD 119 GTSRGIRLR+ G RQMALPHPALMQLSLPL+GRVAAGSPILAQEH+E TY VD Sbjct: 61 GTSRGIRLRDMGNGDERFPGRQMALPHPALMQLSLPLVGRVAAGSPILAQEHIEATYDVD 120 Query: 120 PAMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKS 179 ++F AKPD+LLKVRGMSMRDAGILDGDLLAV++ D A+NGQIVVARL +EVTVKRY+KS Sbjct: 121 RSLFSAKPDFLLKVRGMSMRDAGILDGDLLAVKKIDTAKNGQIVVARLGEEVTVKRYKKS 180 Query: 180 GSVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRSWN 218 GS+I L PENP+FEPI V D+FALEGLAVGL+R+WN Sbjct: 181 GSLIELLPENPDFEPIRVDLAHDEFALEGLAVGLMRTWN 219 >ref|YP_004753137.1| SOS-response repressor and protease LexA [Collimonas fungivorans Ter331] gb|AEK62314.1| SOS-response repressor and protease LexA [Collimonas fungivorans Ter331] Length = 230 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 178/218 (81%), Positives = 194/218 (88%), Gaps = 5/218 (2%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M+KLTARQ+QIL+LIK+AIENTGFPPTRAEIA ELGFRSANAAEEHLQALARKGAI IS Sbjct: 18 MIKLTARQQQILDLIKDAIENTGFPPTRAEIATELGFRSANAAEEHLQALARKGAIVISA 77 Query: 61 GTSRGIRLRESGTTGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQVDP 120 GTSRGIRL ES + S Q+ALPHPALMQLSLPLIGRVAAGSPILAQEH++ +Y VDP Sbjct: 78 GTSRGIRLTESASR--SQGTQLALPHPALMQLSLPLIGRVAAGSPILAQEHIQASYNVDP 135 Query: 121 AMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQKSG 180 A+F AKPDYLLKVRGMSMRDAGILDGDLLAV++AD ARNGQIVVARL D+VTVKRYQK+G Sbjct: 136 ALFSAKPDYLLKVRGMSMRDAGILDGDLLAVKKADSARNGQIVVARLGDDVTVKRYQKTG 195 Query: 181 SVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRSWN 218 S I L PENP+FEPIIV + FALEGLAVGLLRSWN Sbjct: 196 STIQLLPENPDFEPIIVT---EDFALEGLAVGLLRSWN 230 >ref|ZP_08276514.1| SOS-response repressor and protease LexA [Oxalobacteraceae bacterium IMCC9480] gb|EGF30015.1| SOS-response repressor and protease LexA [Oxalobacteraceae bacterium IMCC9480] Length = 220 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 171/220 (77%), Positives = 191/220 (86%), Gaps = 2/220 (0%) Query: 1 MLKLTARQEQILNLIKNAIENTGFPPTRAEIAAELGFRSANAAEEHLQALARKGAIEISP 60 M+KLTARQEQILNLI++AI NTGFPPTRAEIA ELGFRS NAAEEHLQALARKGAIEISP Sbjct: 1 MIKLTARQEQILNLIRDAIINTGFPPTRAEIARELGFRSVNAAEEHLQALARKGAIEISP 60 Query: 61 GTSRGIRLRESGT--TGISTARQMALPHPALMQLSLPLIGRVAAGSPILAQEHVEKTYQV 118 GTSRGIRL +S +RQ+ LPHPALMQLSLPLIGRVAAGSPILA EHVE TYQV Sbjct: 61 GTSRGIRLIKSAVELANERDSRQLVLPHPALMQLSLPLIGRVAAGSPILALEHVEATYQV 120 Query: 119 DPAMFPAKPDYLLKVRGMSMRDAGILDGDLLAVRRADQARNGQIVVARLADEVTVKRYQK 178 DP++F AKPDYLLKVRGMSMRDAGI+DGDL+AV+++D ARNGQIVVARL D+VTVKRY K Sbjct: 121 DPSLFSAKPDYLLKVRGMSMRDAGIIDGDLIAVKKSDSARNGQIVVARLGDDVTVKRYHK 180 Query: 179 SGSVITLFPENPEFEPIIVKPEDDQFALEGLAVGLLRSWN 218 + +I L PEN +F+PI + PE D F+LEGLAVGLLRSWN Sbjct: 181 TDDLIELLPENADFKPIRIDPERDDFSLEGLAVGLLRSWN 220