BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1442.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775478.1| flagellin filament structural protein [Herba... 426 e-117 ref|YP_001022056.1| flagellin-related hook-associated protein [M... 211 2e-52 ref|YP_003276494.1| flagellin-like protein [Comamonas testostero... 203 4e-50 gb|ABC87264.1| flagellin [Xanthomonas campestris pv. campestris] 197 3e-48 gb|ABC87263.1| flagellin [Xanthomonas campestris pv. campestris] 195 9e-48 >ref|YP_003775478.1| flagellin filament structural protein [Herbaspirillum seropedicae SmR1] emb|CAM32643.1| Flagellin protein; filament structural protein [Herbaspirillum seropedicae] emb|CAP19677.1| flagellar protein [Herbaspirillum seropedicae] gb|ADJ63570.1| flagellin protein; filament structural protein [Herbaspirillum seropedicae SmR1] Length = 362 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 346/362 (95%), Positives = 355/362 (98%) Query: 1 MAAVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQIKG 60 MA+VINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQ+KG Sbjct: 1 MASVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS Sbjct: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 Query: 121 QEVFRVLNGTSFNGQNLFTGVGQGASAGTGSNATNVSASLTLSFQVGANVQDNKLNDQIT 180 QEVFRVLNGTSFNGQNLFTG GQGASAGTGS++ NVSASLTLSFQVGANV DNKLNDQIT Sbjct: 121 QEVFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQIT 180 Query: 181 ITLDDLSNNSTIATVIGTSAKGLIGLGDTSGVSTAQATYTSAKAALDNLFATGSSLSSSA 240 ITLDDLSNN T+A VIGTSAKGLIGLG+TSGVSTAQATYTSAKAALDNLFATGSSLSSSA Sbjct: 181 ITLDDLSNNGTMANVIGTSAKGLIGLGNTSGVSTAQATYTSAKAALDNLFATGSSLSSSA 240 Query: 241 LASSAVTLQAAVDSAKLSLDQAVAAPSAQSDAQKAIQNLDKAISLVSSKRAEFGAVQNRF 300 LASSAVTLQA VDSAKL+LDQAVAAPSAQSDAQKAIQNLDKAISL+SSKRAEFGAVQNRF Sbjct: 241 LASSAVTLQATVDSAKLALDQAVAAPSAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRF 300 Query: 301 SAVISNLQVSSENITASRSRIMDTDYAQETANLTRAQILQQAGTAMLSQANSAPQQVLSL 360 SAVISNLQVSSENIT+SRSRIMDTDYAQETANLTRAQILQQAG AMLSQANSAPQQVLSL Sbjct: 301 SAVISNLQVSSENITSSRSRIMDTDYAQETANLTRAQILQQAGNAMLSQANSAPQQVLSL 360 Query: 361 LK 362 LK Sbjct: 361 LK 362 >ref|YP_001022056.1| flagellin-related hook-associated protein [Methylibium petroleiphilum PM1] gb|ABM95821.1| flagellin-related hook-associated protein [Methylibium petroleiphilum PM1] Length = 404 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 185/404 (45%), Positives = 235/404 (58%), Gaps = 42/404 (10%) Query: 1 MAAVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQIKG 60 MA +NTNI SLN QRNL SQSSL TS+QRLSSGLRVNSAKDDAAGLAIA+RMN+ ++G Sbjct: 1 MAMSVNTNIVSLNAQRNLGTSQSSLATSMQRLSSGLRVNSAKDDAAGLAIAERMNASVRG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L VA RNANDGIS+AQTAEGAL VGD LQRMRELAVQ+ N TNSA DRK L E TQL Sbjct: 61 LNVAARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSGNATNSADDRKALQAEVTQLR 120 Query: 121 QEVFRVLNGTSFNGQNLFTG--------VGQGASAG------TGSNATNVSASLTLSFQV 166 E+ RV T+FNG+ L G VG GA T ++A+N+S Sbjct: 121 DEIDRVAKQTTFNGRKLLDGSFTAAAFQVGAGAGDNITVGSLTNASASNLSKITYAEISS 180 Query: 167 GANVQDNK--------LNDQITITLDDLSNNSTIATV--IGTSAKGLIGLGDTSGVSTAQ 216 G +D+ + + IT+DD +N + V I ++ GL LG + + Sbjct: 181 GDLAKDDTDITTLDAIADGDLQITIDDGGDNELVVEVGAIAQASSGLERLGQVAEAINRK 240 Query: 217 ATYTSAKAAL--------------DNLFATGSSLSSSALASSAVTLQAAVDSAKLSLDQA 262 + T A L L A G+ LS T ++ A Sbjct: 241 TSDTGVSAYLVANDDGTYKLDIKASRLDADGAPLSVEFTGFDTTTTGLDEGDVPAAVTDA 300 Query: 263 VAAPS----AQSDAQKAIQNLDKAISLVSSKRAEFGAVQNRFSAVISNLQVSSENITASR 318 + + +SD +I+ +D A+ V+S R GA+Q+RF +SN+Q+ +EN ASR Sbjct: 301 IGIDALSIETESDVWVSIKKIDSALDQVNSARGTLGAIQSRFENAVSNIQIQAENTAASR 360 Query: 319 SRIMDTDYAQETANLTRAQILQQAGTAMLSQANSAPQQVLSLLK 362 RIMD D+A ETANL+R+QILQQAGTAM++QAN PQQVLSLL+ Sbjct: 361 GRIMDADFASETANLSRSQILQQAGTAMVAQANQLPQQVLSLLR 404 >ref|YP_003276494.1| flagellin-like protein [Comamonas testosteroni CNB-2] gb|ACY31198.1| flagellin-like protein [Comamonas testosteroni CNB-2] Length = 392 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 179/394 (45%), Positives = 233/394 (59%), Gaps = 34/394 (8%) Query: 1 MAAVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQIKG 60 MA INTNI SLN QRNL SQSSL+TS+QRLSSGLR+NSAKDDAAGLAIA+RM++Q++G Sbjct: 1 MAMTINTNIQSLNAQRNLGTSQSSLSTSMQRLSSGLRINSAKDDAAGLAIAERMSAQVRG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L AQRNANDG+S+AQTAEGALST+G NLQR+RELAVQ+ N TNS +DR L E QL Sbjct: 61 LNQAQRNANDGVSLAQTAEGALSTIGGNLQRIRELAVQSRNATNSTEDRAALQKEVDQLK 120 Query: 121 QEVFRVLNGTSFNGQNLFTGVGQGASAGTGSNATNV----------------------SA 158 +E+ RV TSFNG L G G+N V Sbjct: 121 EEIDRVATTTSFNGTKLLNGSFTDQEFQVGANQGQVIKVGDFVNAQIDKLGTWSAAADVK 180 Query: 159 SLTLSFQVGANVQDNKLNDQITITLDDLSNNSTIATVIGTSAKGLIGLGDTSGVST---- 214 + + + G + D+KL I + + + G L DT+ + Sbjct: 181 TYSNAAGTGPTIADDKLALSFDINGVTIGVAADTSRTTGQGVTALKAAFDTAVAANPEKL 240 Query: 215 ------AQATYTSAKAALDNLFATGSSLSSSALASSAVTLQAAVDSAKLSLDQAVAAPSA 268 A T A A + +++ AL + VT A +++ D+ + A Sbjct: 241 KGMSMDAAGKITVANADQSASISNLVGMTALALGTETVTTVVAKGASQTGFDKLDVSTIA 300 Query: 269 QSDAQKAIQNLDKAISLVSSKRAEFGAVQNRFSAVISNLQVSSENITASRSRIMDTDYAQ 328 SD AI +D A+ V+S RA+ GA+QNRF +V+SNL V+SEN++AS+SRIMD D+A Sbjct: 301 GSD--NAIVAMDAALKDVNSARADLGAIQNRFESVVSNLSVNSENLSASKSRIMDADFAS 358 Query: 329 ETANLTRAQILQQAGTAMLSQANSAPQQVLSLLK 362 ETANL+R+QILQQAGTAM++QAN PQ VLSLL+ Sbjct: 359 ETANLSRSQILQQAGTAMVAQANQLPQGVLSLLR 392 >gb|ABC87264.1| flagellin [Xanthomonas campestris pv. campestris] Length = 399 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 186/399 (46%), Positives = 247/399 (61%), Gaps = 37/399 (9%) Query: 1 MAAVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQIKG 60 MA VINTN+ SLN QRNLN S +S+ TSIQRLSSGLR+NSAKDDAAGLAI++R +QI+G Sbjct: 1 MAQVINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L VA RNANDGIS+AQTAEGA+ +G NLQR+REL+VQ++N TNSA DR LN E QL+ Sbjct: 61 LDVASRNANDGISLAQTAEGAMVEIGSNLQRIRELSVQSSNATNSASDRDALNSEVKQLT 120 Query: 121 QEVFRVLNGTSFNGQNLFTGVGQGASAGTGSNA-----------TNVSASLTLSFQV--- 166 E+ RV N T+FNG L G GA G++A NV + +F Sbjct: 121 AEIDRVANQTNFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKTNFAAAVS 180 Query: 167 GANVQDNKLNDQITITLDDLSNNSTIATVIGTSAKGLIGLGDTSG-VSTAQATYTSAKAA 225 GA V + N+ST + T A +G GDT+ V+ A + K Sbjct: 181 GAGVTGTATASGSVTGISLSFNDSTGSAKSVTIADVKVGAGDTAADVNKKVAAAINDKLD 240 Query: 226 LDNLFAT-----------------GSSLSSSALASSAVTLQAAVDSAKLSLDQAVAAPSA 268 ++A+ +SLS+ +++ +T+ A + +A + + PS+ Sbjct: 241 QTGMYASIKADGTMQIESLKAGQDFTSLSAGTSSAAGITVGAGLTTASAASGSTASTPSS 300 Query: 269 Q-----SDAQKAIQNLDKAISLVSSKRAEFGAVQNRFSAVISNLQVSSENITASRSRIMD 323 S +QKA++ +DKA++ V+S RA+ GAVQNRF++ I+NL +SEN++ASRSRI D Sbjct: 301 LDISTFSGSQKALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRSRIRD 360 Query: 324 TDYAQETANLTRAQILQQAGTAMLSQANSAPQQVLSLLK 362 DYA+ETA LTR QILQQAGTAML+QA S PQ VLSLL+ Sbjct: 361 ADYAKETAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399 >gb|ABC87263.1| flagellin [Xanthomonas campestris pv. campestris] Length = 399 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 192/403 (47%), Positives = 241/403 (59%), Gaps = 45/403 (11%) Query: 1 MAAVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQIKG 60 MA VINTN+ SLN QRNLN S +S+ TSIQRLSSGLR+NSAKDDAAGLAI++R +QI+G Sbjct: 1 MAQVINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRG 60 Query: 61 LAVAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLS 120 L VA RNANDGIS+AQTAEGA+ +G NLQR+REL+VQ++N TNSA DR LN E QL+ Sbjct: 61 LDVASRNANDGISLAQTAEGAMVEIGSNLQRIRELSVQSSNATNSASDRDALNSEVKQLT 120 Query: 121 QEVFRVLNGTSFNGQNLFTGVGQGASAGTGSNA-----------TNVSASLTLSFQV--- 166 E+ RV N T+FNG L G GA G++A NV + +F Sbjct: 121 AEIDRVANQTNFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKANFAAAVS 180 Query: 167 GANVQDNKLNDQITITLDDLSNNSTIATVIGTSAKGLIGLGDTSGVSTAQATYTSAKAAL 226 GA V + N+ST + T A +G GDT+ A A A Sbjct: 181 GAGVTGTATASGSVTGISLSFNDSTGSAKSVTIADVKVGAGDTA----ADVNKKVAAAIN 236 Query: 227 DNLFATGSSLSSSALASSAV-TLQAAVDSAKLSLDQAVAAP------------------- 266 D L TG S A + + +L+A D LS + AA Sbjct: 237 DKLDQTGMYASIKADGTMQIESLKAGQDFTSLSAGTSNAAGITVGAGLTTASAASGSTAS 296 Query: 267 -------SAQSDAQKAIQNLDKAISLVSSKRAEFGAVQNRFSAVISNLQVSSENITASRS 319 S S +QKA++ +DKA++ V+S RA+ GAVQNRF++ I+NL +SEN++ASRS Sbjct: 297 TLSSLDISTFSGSQKALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRS 356 Query: 320 RIMDTDYAQETANLTRAQILQQAGTAMLSQANSAPQQVLSLLK 362 RI DTDYA+ETA LTR QILQQAGTAML+QA S PQ VLSLL+ Sbjct: 357 RIRDTDYAKETAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399