BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1430.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775466.1| flagellar motor switch protein FliG [Herbasp... 577 e-162 ref|YP_001100152.1| motor switch protein [Herminiimonas arsenico... 470 e-130 ref|YP_001353130.1| FliG flagellar motor switch protein [Janthin... 468 e-130 ref|ZP_08272775.1| Flagellar motor switch protein FliG [Oxalobac... 464 e-129 ref|YP_003050532.1| flagellar motor switch protein FliG [Methylo... 449 e-124 >ref|YP_003775466.1| flagellar motor switch protein FliG [Herbaspirillum seropedicae SmR1] gb|ADJ63558.1| flagellar motor switch FliG protein [Herbaspirillum seropedicae SmR1] Length = 331 Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 329/331 (99%), Positives = 331/331 (100%) Query: 1 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA 60 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA Sbjct: 1 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA 60 Query: 61 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI 120 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI Sbjct: 61 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI 120 Query: 121 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL 180 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL Sbjct: 121 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL 180 Query: 181 LTGNESLKKQQMGGIRTAAEILNFMSGENETAVMNNLRSYDEDMAQKIMDEMFVFENIID 240 LTGNESLKKQQMGGIRTAAEILNFMSGENET+VMNNLRSYDEDMAQKIMDEMFVFENIID Sbjct: 181 LTGNESLKKQQMGGIRTAAEILNFMSGENETSVMNNLRSYDEDMAQKIMDEMFVFENIID 240 Query: 241 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV 300 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV Sbjct: 241 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV 300 Query: 301 DAQQKAILQIVRRLADEGQIVLGAKGEDAFV 331 DAQQKAILQIVRRLADEGQIVLGAKGEDAF+ Sbjct: 301 DAQQKAILQIVRRLADEGQIVLGAKGEDAFI 331 >ref|YP_001100152.1| motor switch protein [Herminiimonas arsenicoxydans] emb|CAL62028.1| Flagellar motor switch protein FliG [Herminiimonas arsenicoxydans] Length = 331 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 259/331 (78%), Positives = 292/331 (88%) Query: 1 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA 60 MS+ G+ KGA+LMLALG DEAAEVMKYLGP+EVQKLGAAMS ++ + EE+ VL F A Sbjct: 1 MSDKGIHKGAVLMLALGADEAAEVMKYLGPREVQKLGAAMSTMKAIQSEELVSVLSEFRA 60 Query: 61 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI 120 ET + +SLGLDSD+YIR VLTKALGDDKA SLLNRILG RDASGIESLKWMDAQSVA+L+ Sbjct: 61 ETEKNTSLGLDSDDYIRDVLTKALGDDKAASLLNRILGARDASGIESLKWMDAQSVADLV 120 Query: 121 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL 180 RNEHPQIIATILVHLERD AC ++ +FTERLRND +LRIATLDGVQPAALRELN+VLTKL Sbjct: 121 RNEHPQIIATILVHLERDQACEVLEHFTERLRNDCVLRIATLDGVQPAALRELNEVLTKL 180 Query: 181 LTGNESLKKQQMGGIRTAAEILNFMSGENETAVMNNLRSYDEDMAQKIMDEMFVFENIID 240 LTGNE+LKK+ MGGIR AAEILNF +GENE +VM NL+ YD DMAQKIMDEMFVF+NI+D Sbjct: 181 LTGNENLKKKPMGGIRAAAEILNFFNGENEVSVMANLKGYDNDMAQKIMDEMFVFDNIMD 240 Query: 241 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV 300 I+ RGIQLLLREVQSESLI+ALKGA+ LR+K F NMSQRA EMM+EDLESKGPVRLSEV Sbjct: 241 IEDRGIQLLLREVQSESLIIALKGATPDLREKFFKNMSQRAGEMMREDLESKGPVRLSEV 300 Query: 301 DAQQKAILQIVRRLADEGQIVLGAKGEDAFV 331 +A QK ILQIVRRLADEGQ+ LG K EDA+V Sbjct: 301 EANQKEILQIVRRLADEGQLTLGGKAEDAYV 331 >ref|YP_001353130.1| FliG flagellar motor switch protein [Janthinobacterium sp. Marseille] gb|ABR88691.1| FliG flagellar motor switch protein [Janthinobacterium sp. Marseille] Length = 331 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 260/331 (78%), Positives = 291/331 (87%) Query: 1 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA 60 M ++GV KGAILMLALG DEAAEVMKYLGP+EVQKLGAAMS ++ + EE+ VL F A Sbjct: 1 MIDNGVHKGAILMLALGADEAAEVMKYLGPREVQKLGAAMSTMKAIQSEELVAVLSEFRA 60 Query: 61 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI 120 ET + +SLGLDSD+YIR VLTKALGDDKA SLLNRILG RDASGIESLKWMD QSVA+L+ Sbjct: 61 ETEKNTSLGLDSDDYIRDVLTKALGDDKAASLLNRILGARDASGIESLKWMDGQSVADLV 120 Query: 121 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL 180 RNEHPQIIATILVHLERD AC ++ FTERLRNDV+LRIATLDGVQPAALRELN+VLTKL Sbjct: 121 RNEHPQIIATILVHLERDQACEVLERFTERLRNDVVLRIATLDGVQPAALRELNEVLTKL 180 Query: 181 LTGNESLKKQQMGGIRTAAEILNFMSGENETAVMNNLRSYDEDMAQKIMDEMFVFENIID 240 LTGNE+LKK+ MGG+R AAEILNF SGENE +VM NL+SYD DMAQKIMDEMFVF+NI+D Sbjct: 181 LTGNENLKKKPMGGVRAAAEILNFFSGENEISVMANLKSYDNDMAQKIMDEMFVFDNIMD 240 Query: 241 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV 300 I+ RGIQLLLREVQSESLIVALKGA+ LR+K F NMSQRA EMM+EDLESKGPVRLSEV Sbjct: 241 IEDRGIQLLLREVQSESLIVALKGATPELREKFFKNMSQRAGEMMREDLESKGPVRLSEV 300 Query: 301 DAQQKAILQIVRRLADEGQIVLGAKGEDAFV 331 + QK ILQI+RRLADEGQ+ LG K EDA+V Sbjct: 301 ETNQKEILQIIRRLADEGQLTLGGKAEDAYV 331 >ref|ZP_08272775.1| Flagellar motor switch protein FliG [Oxalobacteraceae bacterium IMCC9480] gb|EGF33774.1| Flagellar motor switch protein FliG [Oxalobacteraceae bacterium IMCC9480] Length = 319 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 257/319 (80%), Positives = 295/319 (92%) Query: 13 MLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVAETGQASSLGLDS 72 MLALGEDEAAEVMK+L P+EVQKLGAAMS ++ +S EE++ VL++F ET +S+LGLDS Sbjct: 1 MLALGEDEAAEVMKFLSPREVQKLGAAMSTMKAISHEELDTVLKSFRQETESSSALGLDS 60 Query: 73 DEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELIRNEHPQIIATIL 132 DEYIR+VLTKALGDDKA+SLLNRILG RDASGIESLKWMD+QSVAELIRNEHPQIIATIL Sbjct: 61 DEYIRTVLTKALGDDKASSLLNRILGARDASGIESLKWMDSQSVAELIRNEHPQIIATIL 120 Query: 133 VHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKLLTGNESLKKQQM 192 VHLER HAC ++++FTERLRNDV+LRIATLDGVQPAALRELN+VLTKLLTGNESLKK+ M Sbjct: 121 VHLERYHACEVLDHFTERLRNDVVLRIATLDGVQPAALRELNEVLTKLLTGNESLKKKPM 180 Query: 193 GGIRTAAEILNFMSGENETAVMNNLRSYDEDMAQKIMDEMFVFENIIDIDGRGIQLLLRE 252 GGIR AAEILNF+SGENE +V+ NL++YD DMAQKIMDEMFVF+NI+DID RGIQ++LRE Sbjct: 181 GGIRAAAEILNFLSGENEQSVIANLKNYDSDMAQKIMDEMFVFDNIMDIDDRGIQVILRE 240 Query: 253 VQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEVDAQQKAILQIVR 312 VQSESLIVALKGA+ LR+KIF NMS RAAEMM+EDLESKGPVRLSEV+AQQK ILQ+VR Sbjct: 241 VQSESLIVALKGANVDLREKIFKNMSSRAAEMMREDLESKGPVRLSEVEAQQKEILQVVR 300 Query: 313 RLADEGQIVLGAKGEDAFV 331 RL+DEGQI LGAKG+DA+V Sbjct: 301 RLSDEGQIQLGAKGDDAYV 319 >ref|YP_003050532.1| flagellar motor switch protein FliG [Methylovorus glucosetrophus SIP3-4] ref|YP_004039202.1| flagellar motor switch protein flig [Methylovorus sp. MP688] gb|ACT50005.1| flagellar motor switch protein FliG [Methylovorus glucosetrophus SIP3-4] gb|ADQ83966.1| flagellar motor switch protein FliG [Methylovorus sp. MP688] Length = 331 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 248/331 (74%), Positives = 293/331 (88%) Query: 1 MSNDGVQKGAILMLALGEDEAAEVMKYLGPKEVQKLGAAMSALRNVSFEEINEVLEAFVA 60 MS DGV K AILMLALGEDEAAEVMKYL PKEVQKLG+AM+ +++V ++I V+ F+ Sbjct: 1 MSEDGVMKSAILMLALGEDEAAEVMKYLSPKEVQKLGSAMAGMKSVEHDQIEAVVTEFLD 60 Query: 61 ETGQASSLGLDSDEYIRSVLTKALGDDKATSLLNRILGGRDASGIESLKWMDAQSVAELI 120 Q +S+GLDSDEYIRSVLTKALGDDKA LLNRIL RDASGIESLKWMDAQ+VAE I Sbjct: 61 IADQKTSIGLDSDEYIRSVLTKALGDDKAAGLLNRILQTRDASGIESLKWMDAQTVAEFI 120 Query: 121 RNEHPQIIATILVHLERDHACGIINNFTERLRNDVILRIATLDGVQPAALRELNDVLTKL 180 +NEHPQIIATILVHLE D + +++NFT+RLR DV+LRIATLDGV+P ALRELN+V+TKL Sbjct: 121 KNEHPQIIATILVHLEPDQSAEVLSNFTDRLRQDVMLRIATLDGVKPVALRELNEVMTKL 180 Query: 181 LTGNESLKKQQMGGIRTAAEILNFMSGENETAVMNNLRSYDEDMAQKIMDEMFVFENIID 240 LTGNESLKKQQMGGI+ AAEI+N++ G+NE +VM L+SYDEDMAQKIMDEMFVF+N+ID Sbjct: 181 LTGNESLKKQQMGGIKAAAEIMNYLGGDNEASVMEGLKSYDEDMAQKIMDEMFVFDNVID 240 Query: 241 IDGRGIQLLLREVQSESLIVALKGASQGLRDKIFANMSQRAAEMMKEDLESKGPVRLSEV 300 ID +GIQ++LREVQSE+LIVALKGA+Q LRDKIF NMS RAAEMM+EDLE+KGPV+LSEV Sbjct: 241 IDDKGIQVMLREVQSETLIVALKGATQELRDKIFKNMSSRAAEMMREDLETKGPVKLSEV 300 Query: 301 DAQQKAILQIVRRLADEGQIVLGAKGEDAFV 331 +AQQK ILQI+RRLADEGQI+LG KG++A+V Sbjct: 301 EAQQKQILQIIRRLADEGQIILGGKGDEAYV 331