BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1413.p (840 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773477.1| acyl-CoA transferase [Herbaspirillum seroped... 930 0.0 gb|EFV87681.1| acyl-CoA transferase [Achromobacter xylosoxidans ... 668 0.0 gb|EGP48010.1| acetyl-CoA hydrolase [Achromobacter xylosoxidans ... 666 0.0 ref|ZP_06689255.1| succinate CoA transferase [Achromobacter piec... 660 0.0 ref|NP_888406.1| acyl-CoA transferase [Bordetella bronchiseptica... 659 0.0 >ref|YP_003773477.1| acyl-CoA transferase [Herbaspirillum seropedicae SmR1] gb|ADJ61569.1| acyl-CoA transferase protein [Herbaspirillum seropedicae SmR1] Length = 500 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 476/500 (95%), Positives = 486/500 (97%) Query: 341 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 400 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF Sbjct: 1 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 60 Query: 401 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRKKINAGEVMFIDQHLSETAEQLRSG 460 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLR+KINAGEVMFIDQHLSETAEQLRSG Sbjct: 61 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRRKINAGEVMFIDQHLSETAEQLRSG 120 Query: 461 TPSRIDIAVIEAAAITEEGIVPTMSVGNSASFVEQARHIVIELNTSVPLALEGLHDIYLP 520 TPSRIDIAVIEAAAITEEGIVPTMSVGNSASFVEQAR IVIELNTSVPLALEGLHDIYLP Sbjct: 121 TPSRIDIAVIEAAAITEEGIVPTMSVGNSASFVEQARQIVIELNTSVPLALEGLHDIYLP 180 Query: 521 AARPERKPIPLTAAGDRIGRPTIPFDPEKVVAIVLTETPDSPSSVLPPDDETRAIARHVI 580 AARP R+PIPLT A RIG TIPFDP KVVAIVLT+TPDSPSSVLPPDDETRAIA HVI Sbjct: 181 AARPAREPIPLTVADQRIGSTTIPFDPAKVVAIVLTQTPDSPSSVLPPDDETRAIAGHVI 240 Query: 581 HFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDSG 640 HFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDSG Sbjct: 241 HFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDSG 300 Query: 641 QLAFASASSITLSQAKYAHFLANLDRYRDKLVLRPQEISNHPELVRRLGIIGLNTALEFD 700 QLAFASASSITLSQ KYAHFLAN+DRYRDK+VLRPQEISNHPELVRRLGIIGLNTALEFD Sbjct: 301 QLAFASASSITLSQDKYAHFLANIDRYRDKVVLRPQEISNHPELVRRLGIIGLNTALEFD 360 Query: 701 IYGNVNSTHVGGTHMMNGIGGSGDFARNGQLSVFVSKSVAKDGAISSVVPMVSHVDHSEH 760 +YGNVNSTHVGGTHMMNGIGGSGDFARNGQ+S+FVSKSVAKDGAISSVVPMVSHVDHSEH Sbjct: 361 LYGNVNSTHVGGTHMMNGIGGSGDFARNGQISIFVSKSVAKDGAISSVVPMVSHVDHSEH 420 Query: 761 DVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRPQLRDYFERACRAGGHTPHLLGEA 820 DVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYR QLRDYFERAC+AGGHTPHLLGEA Sbjct: 421 DVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRAQLRDYFERACQAGGHTPHLLGEA 480 Query: 821 FSWHQHYAQQRTMRLDQHQG 840 FSWHQHYA+ RTMRLDQ G Sbjct: 481 FSWHQHYARHRTMRLDQRAG 500 >gb|EFV87681.1| acyl-CoA transferase [Achromobacter xylosoxidans C54] Length = 565 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 340/495 (68%), Positives = 402/495 (81%), Gaps = 1/495 (0%) Query: 341 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 400 M S RIR P L K+ SA +AA +GMT+G+SGFTRAGD K++P LA RA E L Sbjct: 61 MHSDRIRHPGLRAKITSAQQAALLVQDGMTVGMSGFTRAGDCKSVPAELARRAEHEPLSI 120 Query: 401 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRKKINAGEVMFIDQHLSETAEQLRSG 460 T+ITGASLG+ +D ++A+A +LARR+PFQVD TLR+KIN GE+ FIDQHLSETAEQLR+G Sbjct: 121 TLITGASLGHDTDKMLAQANVLARRMPFQVDTTLRRKINQGEIAFIDQHLSETAEQLRAG 180 Query: 461 TPSRIDIAVIEAAAITEEG-IVPTMSVGNSASFVEQARHIVIELNTSVPLALEGLHDIYL 519 +D+A+IEAAAITE G IVPTMSVGNSASFV+QAR ++IELN VP A+EGLHDIY+ Sbjct: 181 HIGPVDVAIIEAAAITETGAIVPTMSVGNSASFVQQARRVIIELNLGVPAAIEGLHDIYV 240 Query: 520 PAARPERKPIPLTAAGDRIGRPTIPFDPEKVVAIVLTETPDSPSSVLPPDDETRAIARHV 579 P RP+R+P+ L +A RIG+P I DP+K+ AIV+T+ PDSPS+ LPPD ET AIA H+ Sbjct: 241 PTERPKREPMGLVSADQRIGQPFIEVDPDKIAAIVITQEPDSPSNALPPDAETNAIAAHI 300 Query: 580 IHFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDS 639 FL EV+AGRL ++L PLQAGIGTIANAVLHG S F +L MYSEVLQDSAI+LLD Sbjct: 301 NAFLRREVDAGRLGNSLLPLQAGIGTIANAVLHGFESSDFESLTMYSEVLQDSAIELLDQ 360 Query: 640 GQLAFASASSITLSQAKYAHFLANLDRYRDKLVLRPQEISNHPELVRRLGIIGLNTALEF 699 G+LAFASASSIT+S+ Y LAN++ YR ++VLRPQEISN PE+VRRLGII +NTALEF Sbjct: 361 GKLAFASASSITVSKPVYEKILANIEHYRQRIVLRPQEISNAPEIVRRLGIIAINTALEF 420 Query: 700 DIYGNVNSTHVGGTHMMNGIGGSGDFARNGQLSVFVSKSVAKDGAISSVVPMVSHVDHSE 759 DIYGNVNSTHVGGTHMMNGIGGSGDFARN L++FVSKS+AK+G ISSVVPMVSHVDH+E Sbjct: 421 DIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLAIFVSKSMAKNGDISSVVPMVSHVDHTE 480 Query: 760 HDVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRPQLRDYFERACRAGGHTPHLLGE 819 HDVDVLVTE GLADLRGLAPRERA +I+ C HP YR L+DYF+RAC GG TPHLL E Sbjct: 481 HDVDVLVTECGLADLRGLAPRERARAIIQHCVHPSYREALQDYFDRACERGGQTPHLLEE 540 Query: 820 AFSWHQHYAQQRTMR 834 AFSWHQ + + TMR Sbjct: 541 AFSWHQRFNETDTMR 555 >gb|EGP48010.1| acetyl-CoA hydrolase [Achromobacter xylosoxidans AXX-A] Length = 505 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 339/495 (68%), Positives = 402/495 (81%), Gaps = 1/495 (0%) Query: 341 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 400 M + RIR P L K+ SA +AA +GMT+G+SGFTRAGD K++P ALA+RA +E L Sbjct: 1 MHTDRIRHPGLRAKITSAEQAALLVQDGMTVGMSGFTRAGDCKSVPAALAERAGREPLAI 60 Query: 401 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRKKINAGEVMFIDQHLSETAEQLRSG 460 T+ITGASLG+ +D ++A+A LARR+PFQVD TLR+KIN GE+ FIDQHLSETAEQLR+G Sbjct: 61 TLITGASLGHDTDKMLAQANALARRMPFQVDTTLRRKINQGEIAFIDQHLSETAEQLRAG 120 Query: 461 TPSRIDIAVIEAAAITEEG-IVPTMSVGNSASFVEQARHIVIELNTSVPLALEGLHDIYL 519 +D+A+IEAAAITE G IVPTMSVGNSASF +QAR ++IELN VP A+EGLHDIY+ Sbjct: 121 HIGPVDVAIIEAAAITETGAIVPTMSVGNSASFAQQARCVIIELNLGVPAAIEGLHDIYV 180 Query: 520 PAARPERKPIPLTAAGDRIGRPTIPFDPEKVVAIVLTETPDSPSSVLPPDDETRAIARHV 579 PA RP R+P+ L +A RIG+P I DP+K+ AIV+T PDSPS+ LPPD ET AIA H+ Sbjct: 181 PAGRPNREPMGLVSADQRIGQPFIEVDPDKIAAIVITHEPDSPSNALPPDAETNAIAAHI 240 Query: 580 IHFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDS 639 FL EV+AGRL ++L PLQAGIGTIANAVLHG S F L MYSEVLQDSAI+LLD Sbjct: 241 NAFLRREVDAGRLTNSLLPLQAGIGTIANAVLHGFESSDFDGLTMYSEVLQDSAIELLDQ 300 Query: 640 GQLAFASASSITLSQAKYAHFLANLDRYRDKLVLRPQEISNHPELVRRLGIIGLNTALEF 699 G+LAFASASSIT+S+ Y LAN+D YR+++VLRPQEISN PE+VRRLGII +NTALEF Sbjct: 301 GKLAFASASSITVSKPVYEKILANIDHYRERIVLRPQEISNAPEIVRRLGIIAINTALEF 360 Query: 700 DIYGNVNSTHVGGTHMMNGIGGSGDFARNGQLSVFVSKSVAKDGAISSVVPMVSHVDHSE 759 DIYGNVNSTHVGGTHMMNGIGGSGDFARN L++FVSKS+AK+G ISSVVPMVSHVDH+E Sbjct: 361 DIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLAIFVSKSMAKNGDISSVVPMVSHVDHTE 420 Query: 760 HDVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRPQLRDYFERACRAGGHTPHLLGE 819 HDVDVLVTE GLADLRGLAPRERA +I+ C HP YR L+DYF+RAC GG TPHLL E Sbjct: 421 HDVDVLVTECGLADLRGLAPRERARAIIQHCVHPSYREALQDYFDRACERGGQTPHLLEE 480 Query: 820 AFSWHQHYAQQRTMR 834 AF+WHQ + + +MR Sbjct: 481 AFAWHQRFNETDSMR 495 >ref|ZP_06689255.1| succinate CoA transferase [Achromobacter piechaudii ATCC 43553] gb|EFF73774.1| succinate CoA transferase [Achromobacter piechaudii ATCC 43553] Length = 505 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 339/498 (68%), Positives = 397/498 (79%), Gaps = 1/498 (0%) Query: 341 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 400 M RIR P L K+ SA +AA +GMT+G+SGFTRAGD K++P ALA RA +E L Sbjct: 1 MHLDRIRHPGLLDKITSADKAALLVKDGMTVGMSGFTRAGDCKSVPAALARRAEREPLAI 60 Query: 401 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRKKINAGEVMFIDQHLSETAEQLRSG 460 T+ITGASLG+ +D ++A+A L RR+PFQVD TLR+KIN G++ FIDQHLSET EQLR+G Sbjct: 61 TLITGASLGHDTDKMLAQANALTRRMPFQVDTTLRRKINQGDIAFIDQHLSETVEQLRAG 120 Query: 461 TPSRIDIAVIEAAAITEEG-IVPTMSVGNSASFVEQARHIVIELNTSVPLALEGLHDIYL 519 I++A+IEAAAITE G IVPTMSVGNSASF QA I+IELN VP A+EGLHDIY Sbjct: 121 HLGPINVAIIEAAAITETGGIVPTMSVGNSASFARQADKIIIELNVGVPAAIEGLHDIYE 180 Query: 520 PAARPERKPIPLTAAGDRIGRPTIPFDPEKVVAIVLTETPDSPSSVLPPDDETRAIARHV 579 PA RP R+PI L + RIG+P I DP+K+ AIV+T PDSPS+ LPPDDET AIA H+ Sbjct: 181 PADRPARQPIGLVSPDQRIGQPFIEVDPDKIAAIVITHEPDSPSNALPPDDETNAIAGHI 240 Query: 580 IHFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDS 639 FL EV+AGRL + L PLQAGIGTIANAVLHG S F L MYSEVLQDSAI+LLD Sbjct: 241 NTFLRAEVDAGRLSNALLPLQAGIGTIANAVLHGFESSDFEQLTMYSEVLQDSAIELLDQ 300 Query: 640 GQLAFASASSITLSQAKYAHFLANLDRYRDKLVLRPQEISNHPELVRRLGIIGLNTALEF 699 G+LAFASASSIT+S+ Y LANL+ YR+++VLRPQEISN PE+VRRLGII +NTALEF Sbjct: 301 GKLAFASASSITVSKPVYDKILANLEHYRERIVLRPQEISNAPEIVRRLGIIAINTALEF 360 Query: 700 DIYGNVNSTHVGGTHMMNGIGGSGDFARNGQLSVFVSKSVAKDGAISSVVPMVSHVDHSE 759 DIYGNVNSTHVGGTHMMNGIGGSGDFARN L++FVSKS+AK+G ISSVVPMVSHVDH+E Sbjct: 361 DIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLAIFVSKSMAKNGDISSVVPMVSHVDHTE 420 Query: 760 HDVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRPQLRDYFERACRAGGHTPHLLGE 819 HDVDVLVTE GLADLRGLAPRERA +I+ C HP YR L+DYF+RAC+ GG TPHLL E Sbjct: 421 HDVDVLVTECGLADLRGLAPRERARAIIQHCVHPSYRAALQDYFDRACQRGGQTPHLLEE 480 Query: 820 AFSWHQHYAQQRTMRLDQ 837 AFSWHQ + + +MR D+ Sbjct: 481 AFSWHQRFNETDSMRADK 498 >ref|NP_888406.1| acyl-CoA transferase [Bordetella bronchiseptica RB50] emb|CAE32358.1| putative acyl-CoA transferase [Bordetella bronchiseptica RB50] Length = 505 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 343/496 (69%), Positives = 401/496 (80%), Gaps = 1/496 (0%) Query: 341 MDSQRIRQPALAGKVMSAAEAATFFHNGMTIGLSGFTRAGDAKAMPRALADRAAQEELHF 400 M +RIR P L ++ S EAA H+GMT+G+SGFTRAGD K++P ALA+RAA E L Sbjct: 1 MHLERIRHPGLRARLASPQEAARLVHDGMTVGMSGFTRAGDCKSVPAALAERAAAEPLRI 60 Query: 401 TVITGASLGNGSDGLMAEAGLLARRLPFQVDPTLRKKINAGEVMFIDQHLSETAEQLRSG 460 T++TGASLG+ +D L+A+AG+LARR+PFQVD TLR+KIN GE+ F+DQHLSET EQLR+G Sbjct: 61 TLLTGASLGHDTDKLLAQAGVLARRMPFQVDTTLRRKINQGEIAFVDQHLSETVEQLRAG 120 Query: 461 TPSRIDIAVIEAAAITEEG-IVPTMSVGNSASFVEQARHIVIELNTSVPLALEGLHDIYL 519 IDIA++EAAAITE+G IVPTMSVGNSASFVEQAR +++ELN VP A+EGLHDI + Sbjct: 121 HIGPIDIAIVEAAAITEDGGIVPTMSVGNSASFVEQARLVIVELNLGVPAAIEGLHDIVI 180 Query: 520 PAARPERKPIPLTAAGDRIGRPTIPFDPEKVVAIVLTETPDSPSSVLPPDDETRAIARHV 579 P ARP R+P+PL + RIG P I DP+K+ AIV+T PDSPS+ LPPD+ET AIA H+ Sbjct: 181 PGARPGRQPLPLVSVDQRIGAPCIAVDPDKIAAIVVTNEPDSPSNALPPDEETGAIAGHI 240 Query: 580 IHFLECEVEAGRLPHTLAPLQAGIGTIANAVLHGLVESPFRNLVMYSEVLQDSAIDLLDS 639 + FL EV GRL +L PLQAGIGTIANAVLHG ES F L MYSEVLQDSAI+LLD Sbjct: 241 VGFLRQEVNQGRLSRSLLPLQAGIGTIANAVLHGFGESEFEGLTMYSEVLQDSAIELLDQ 300 Query: 640 GQLAFASASSITLSQAKYAHFLANLDRYRDKLVLRPQEISNHPELVRRLGIIGLNTALEF 699 G+L+FASASSIT+S Y L NL+ YR ++VLRPQEISN PELVRRLG+I +NTALEF Sbjct: 301 GKLSFASASSITVSLPVYERILGNLEHYRQRIVLRPQEISNAPELVRRLGVIAINTALEF 360 Query: 700 DIYGNVNSTHVGGTHMMNGIGGSGDFARNGQLSVFVSKSVAKDGAISSVVPMVSHVDHSE 759 DIYGNVNSTHVGGTHMMNGIGGSGDFARN LS+FV+KS+A++G ISSVVPMVSHVDH+E Sbjct: 361 DIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLSIFVTKSMARNGDISSVVPMVSHVDHNE 420 Query: 760 HDVDVLVTEWGLADLRGLAPRERAVKVIEQCCHPDYRPQLRDYFERACRAGGHTPHLLGE 819 HDVD+LVTE GLADLRGLAPRERA +I C HP YR LRDYFERACR GG TPHLL E Sbjct: 421 HDVDILVTECGLADLRGLAPRERARAIIAHCVHPSYRDALRDYFERACRRGGQTPHLLEE 480 Query: 820 AFSWHQHYAQQRTMRL 835 AFSWHQ Y + TMRL Sbjct: 481 AFSWHQRYNETDTMRL 496