BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1406.p (212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773469.1| ABC transporter ATPase [Herbaspirillum serop... 352 2e-95 ref|YP_004750689.1| ABC transporter involved in cytochrome c bio... 218 6e-55 ref|YP_524623.1| ABC transporter-like protein [Rhodoferax ferrir... 169 2e-40 ref|YP_980353.1| ABC transporter-like protein [Polaromonas napht... 156 2e-36 emb|CBA26757.1| hypothetical protein Csp_G38230 [Curvibacter put... 150 1e-34 >ref|YP_003773469.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ61561.1| ABC-type transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 212 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 190/212 (89%), Positives = 198/212 (93%) Query: 1 MTQVSDRAALLLVSRLNFSYPGLDLFQDFSARITGGVTLVRGGDGRGKTTLLNLLGGLMP 60 MTQ SDR ALLLVSRLNFSYPGLDLFQDFSARIT G+TLVRGGDGRGKTTLLNLL GLMP Sbjct: 1 MTQASDRTALLLVSRLNFSYPGLDLFQDFSARITPGLTLVRGGDGRGKTTLLNLLAGLMP 60 Query: 61 ARDGVLELNGVRLDGEPENYRRQVFFIDPRTEAYDQMTPPEVFAALAQRYPHFDHGLLPA 120 RDGVLEL+G+RLD E ENYRRQVFFIDPR+EAY+QMTPPEVFAALA+R+PHFDH LPA Sbjct: 61 VRDGVLELDGLRLDSEAENYRRQVFFIDPRSEAYEQMTPPEVFAALAERHPHFDHARLPA 120 Query: 121 LTEGLSLTPHLEKKLFMLSTGSKRKVYLAAAFAAHATLTLLDDPYASLDRASIQFVAATL 180 LTEGLSLTPHLEKKLFMLSTGSKRKVYLAAAFAA ATLTLLDDPYASLDRASI FVAA L Sbjct: 121 LTEGLSLTPHLEKKLFMLSTGSKRKVYLAAAFAAQATLTLLDDPYASLDRASINFVAAML 180 Query: 181 NAHAADADQAWVVAMYETPEAVRLAGTIDLGD 212 NAHA DA QAWVVAMYETPEA+RLAGTIDLGD Sbjct: 181 NAHAEDARQAWVVAMYETPEAIRLAGTIDLGD 212 >ref|YP_004750689.1| ABC transporter involved in cytochrome c biogenesis, ATPase component [Collimonas fungivorans Ter331] gb|AEK59866.1| ABC transporter involved in cytochrome c biogenesis, ATPase component [Collimonas fungivorans Ter331] Length = 210 Score = 218 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 125/204 (61%), Positives = 153/204 (75%) Query: 9 ALLLVSRLNFSYPGLDLFQDFSARITGGVTLVRGGDGRGKTTLLNLLGGLMPARDGVLEL 68 A+L + L F YP +LF ++SA I GVTLVRGGDGRGK++LL LL G + A+ G L L Sbjct: 7 AILEAAGLTFHYPERELFSNWSAEIPAGVTLVRGGDGRGKSSLLRLLAGDLAAQGGQLHL 66 Query: 69 NGVRLDGEPENYRRQVFFIDPRTEAYDQMTPPEVFAALAQRYPHFDHGLLPALTEGLSLT 128 N + L+ +P+ YRRQVF++DPR+EA+DQMT + F +L YP FD LLP L +GLSLT Sbjct: 67 NDISLEAQPDLYRRQVFWVDPRSEAFDQMTARDYFVSLHAAYPGFDDTLLPGLAKGLSLT 126 Query: 129 PHLEKKLFMLSTGSKRKVYLAAAFAAHATLTLLDDPYASLDRASIQFVAATLNAHAADAD 188 PHL+KKLFMLSTGSKRKV+LAAAFAA A L LLDDP+A LD+ASI FV LN AA+ Sbjct: 127 PHLDKKLFMLSTGSKRKVWLAAAFAAGARLNLLDDPFAGLDKASINFVVKRLNQAAANPA 186 Query: 189 QAWVVAMYETPEAVRLAGTIDLGD 212 QAWV+A+YE PE V LA I+LGD Sbjct: 187 QAWVIALYEAPEGVPLAALIELGD 210 >ref|YP_524623.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gb|ABD71092.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 173 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 99/173 (57%), Positives = 124/173 (71%) Query: 40 VRGGDGRGKTTLLNLLGGLMPARDGVLELNGVRLDGEPENYRRQVFFIDPRTEAYDQMTP 99 +RGGDG GKTTLL LL G +PA G L++N VRL +YR+QVF+ DPR+ A DQ+TP Sbjct: 1 MRGGDGSGKTTLLRLLAGDLPAHAGHLQVNDVRLADLSVSYRQQVFWADPRSSALDQITP 60 Query: 100 PEVFAALAQRYPHFDHGLLPALTEGLSLTPHLEKKLFMLSTGSKRKVYLAAAFAAHATLT 159 + F +L + +P FD LL L +GLSL PHL+K L+MLSTGSKRKV+LAAAFA+ A +T Sbjct: 61 VDYFTSLHRNHPGFDEQLLGELIKGLSLAPHLDKPLYMLSTGSKRKVWLAAAFASGAAVT 120 Query: 160 LLDDPYASLDRASIQFVAATLNAHAADADQAWVVAMYETPEAVRLAGTIDLGD 212 LLD+P+A+LD+ASI FV L A +AWV+A YE P V LA IDLGD Sbjct: 121 LLDEPFAALDKASIVFVMELLEDAARHPARAWVLAHYEAPGDVPLAQIIDLGD 173 >ref|YP_980353.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gb|ABM35432.1| ABC transporter related protein [Polaromonas naphthalenivorans CJ2] Length = 221 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 102/206 (49%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 10 LLLVSRLNFSYP---GLDLFQDFSARITGGVTLVRGGDGRGKTTLLNLLGGLMPARDGVL 66 +L+ L+FS+ LF S + GVT V G +G GKTTLL LL G +P+ G L Sbjct: 9 ILMAEGLSFSHSQPSAPPLFDQLSLVLAPGVTWVCGDEGTGKTTLLQLLAGKLPS-TGQL 67 Query: 67 ELNGVRLDGEPENYRRQVFFIDPRTEAYDQMTPPEVFAALAQRYPHFDHGLLPALTEGLS 126 + GV L E E Y+RQV + DPR A DQ T ++FA L QR+P D L A +GLS Sbjct: 68 RIQGVCLTQEREAYQRQVAWFDPRATALDQQTARQIFAGLPQRHPGCDLDALQAHIDGLS 127 Query: 127 LTPHLEKKLFMLSTGSKRKVYLAAAFAAHATLTLLDDPYASLDRASIQFVAATLNAHAAD 186 L PHL+K LFMLSTGS+RKV+LAAA AA A +TLLD P+ +LDR SI ++ A L A Sbjct: 128 LAPHLDKALFMLSTGSRRKVFLAAALAARAPVTLLDQPFMALDRPSIDYLLAVLAEAARQ 187 Query: 187 ADQAWVVAMYETPEAVRLAGTIDLGD 212 +AWVVA YE P V LA + LG+ Sbjct: 188 PGRAWVVADYEAPGQVALAAVVKLGE 213 >emb|CBA26757.1| hypothetical protein Csp_G38230 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 174 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 78/173 (45%), Positives = 111/173 (64%) Query: 39 LVRGGDGRGKTTLLNLLGGLMPARDGVLELNGVRLDGEPENYRRQVFFIDPRTEAYDQMT 98 +V GG+GRGK++LL +L G + L+L G L +P YR++ F++DPRT A+DQ Sbjct: 1 MVTGGEGRGKSSLLRMLAGDLAVAGSSLQLAGTGLQSQPAQYRQKAFWMDPRTSAWDQTP 60 Query: 99 PPEVFAALAQRYPHFDHGLLPALTEGLSLTPHLEKKLFMLSTGSKRKVYLAAAFAAHATL 158 + F +++P ++ L L L L HL K ++MLSTGSKRKV+++AA A+ A L Sbjct: 61 AAQFFQQSRRQWPQWNVELCAELVSALGLEEHLPKPMYMLSTGSKRKVWISAACASGAEL 120 Query: 159 TLLDDPYASLDRASIQFVAATLNAHAADADQAWVVAMYETPEAVRLAGTIDLG 211 T LD+P+A+LDR SI+ + L AA + +AWV+A YE P V LA TIDLG Sbjct: 121 TCLDEPFAALDRGSIRTITELLQDAAAHSPRAWVLADYEAPAGVPLAATIDLG 173