BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1405.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAQ56523.1| cog3541, nucleotidyltransferase protein [Ralston... 273 3e-71 ref|ZP_00945058.1| Hypothetical cytosolic protein [Ralstonia sol... 270 2e-70 ref|YP_003747019.1| hypothetical protein RCFBP_21262 [Ralstonia ... 270 3e-70 gb|AEG70466.1| nucleotidyltransferase protein [Ralstonia solanac... 268 6e-70 ref|YP_003753794.1| hypothetical protein RPSI07_3185 [Ralstonia ... 268 6e-70 >emb|CAQ56523.1| cog3541, nucleotidyltransferase protein [Ralstonia solanacearum MolK2] Length = 280 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 144/259 (55%), Positives = 176/259 (67%), Gaps = 1/259 (0%) Query: 19 HEHPIDPQIRAEIDKTLARIESEHQVRVLFACESGSRGWGFASPDSDYDVRFIYVHRPDW 78 ++HP+ IRA + LA IE H VRVLFACESGSRGWGFASPDSDYDVRF+YVHRP W Sbjct: 17 YDHPVSDAIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAW 76 Query: 79 YLTVFPGRDVIELPVNATYDVSGWDLRKTLALLHNGNATVVEWLSSPVVYRADVSFVDKI 138 YL+V P RDVIE+P++ DV GW+LRK L L+H N T++EWL+SP+VYR D + V ++ Sbjct: 77 YLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDAAAVQRM 136 Query: 139 NAAADLVHRPDRVFHHYLQMARKNYREYLKGERVRLKKYLYVLRPLMAALWVEQQRGPVP 198 A R HYL MA KN+R YL+GE VRLKKYLYVLRPL+AA W++ RG P Sbjct: 137 RTLAPTFFSERRGRWHYLSMAAKNFRGYLQGETVRLKKYLYVLRPLLAAQWIDAGRGMPP 196 Query: 199 MRFLDLVEAIVSDAALRPAIDALLVIKRRAGEAEEGAAIPEINRFIELELQRLEHVPTPR 258 MRF DL +A+V+DA LR I+ LL IK A EAE GA P I+ F+E L E VP Sbjct: 197 MRFADLADAMVTDAPLRDEINQLLAIKMAASEAEYGARFPRIHAFVEQALAA-EAVPAEF 255 Query: 259 KDERGEYSVLDRLLRDVVM 277 + G+ + LD L VM Sbjct: 256 RQGSGDPAALDAFLYATVM 274 >ref|ZP_00945058.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551] ref|YP_002258461.1| cog3541, nucleotidyltransferase protein [Ralstonia solanacearum IPO1609] gb|EAP72478.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551] emb|CAQ60383.1| cog3541, nucleotidyltransferase protein [Ralstonia solanacearum IPO1609] Length = 280 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 143/259 (55%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 19 HEHPIDPQIRAEIDKTLARIESEHQVRVLFACESGSRGWGFASPDSDYDVRFIYVHRPDW 78 ++HP+ IRA + LA IE H VRVLFACESGSRGWGFASPDSDYDVRF+YVHRP W Sbjct: 17 YDHPVSDDIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAW 76 Query: 79 YLTVFPGRDVIELPVNATYDVSGWDLRKTLALLHNGNATVVEWLSSPVVYRADVSFVDKI 138 YL+V P RDVIE+P++ DV GW+LRK L L+H N T++EWL+SP+VYR D + ++ Sbjct: 77 YLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDAAAAQRM 136 Query: 139 NAAADLVHRPDRVFHHYLQMARKNYREYLKGERVRLKKYLYVLRPLMAALWVEQQRGPVP 198 A R HYL MA KN+R YL+GE VRLKKYLYVLRPL+AA W++ RG P Sbjct: 137 RTLAPTFFSERRGRWHYLSMAAKNFRGYLQGETVRLKKYLYVLRPLLAAQWIDAGRGMPP 196 Query: 199 MRFLDLVEAIVSDAALRPAIDALLVIKRRAGEAEEGAAIPEINRFIELELQRLEHVPTPR 258 MRF DL +A+V+DA LR I+ LL IK A EAE GA P I+ F+E L E VP Sbjct: 197 MRFADLADAMVTDAPLRDEINQLLAIKMAALEAEYGARFPRIHAFVEQALTA-EAVPAEF 255 Query: 259 KDERGEYSVLDRLLRDVVM 277 + G+ + LD L VM Sbjct: 256 RQGSGDPAALDAFLYATVM 274 >ref|YP_003747019.1| hypothetical protein RCFBP_21262 [Ralstonia solanacearum CFBP2957] emb|CBJ44437.1| conserved protein of unknown function (nucleotidyltransferase) [Ralstonia solanacearum CFBP2957] Length = 268 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 142/259 (54%), Positives = 175/259 (67%), Gaps = 1/259 (0%) Query: 19 HEHPIDPQIRAEIDKTLARIESEHQVRVLFACESGSRGWGFASPDSDYDVRFIYVHRPDW 78 ++HP+ IRA + LA IE H VRVLFACESGSRGWGFASPDSDYDVRF+YVHRP W Sbjct: 5 YDHPVCDAIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAW 64 Query: 79 YLTVFPGRDVIELPVNATYDVSGWDLRKTLALLHNGNATVVEWLSSPVVYRADVSFVDKI 138 YL+V P RDVIE+P++ DV GW+LRK L L+H N T++EWL+SP+VYR D + ++ Sbjct: 65 YLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDAAAAQRM 124 Query: 139 NAAADLVHRPDRVFHHYLQMARKNYREYLKGERVRLKKYLYVLRPLMAALWVEQQRGPVP 198 A + HYL MA KN+R YL+GE VRLKKYLYVLRPL+AA W++ RG P Sbjct: 125 RMLAPTFFSERKGRWHYLSMAAKNFRGYLQGETVRLKKYLYVLRPLLAAQWIDTGRGMPP 184 Query: 199 MRFLDLVEAIVSDAALRPAIDALLVIKRRAGEAEEGAAIPEINRFIELELQRLEHVPTPR 258 MRF DL +A+V+DA LR I+ LL IK A EAE GA P I+ F+E L E VP Sbjct: 185 MRFADLADAMVTDAPLRDEINQLLAIKMAASEAEYGARFPRIHAFVEQALAA-EAVPAEI 243 Query: 259 KDERGEYSVLDRLLRDVVM 277 + G+ + LD L VM Sbjct: 244 RQGSGDPAALDAFLYATVM 262 >gb|AEG70466.1| nucleotidyltransferase protein [Ralstonia solanacearum Po82] Length = 280 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 141/259 (54%), Positives = 174/259 (67%), Gaps = 1/259 (0%) Query: 19 HEHPIDPQIRAEIDKTLARIESEHQVRVLFACESGSRGWGFASPDSDYDVRFIYVHRPDW 78 ++HP+ +RA + LA IE H VRVLFACESGSRGWGFASPDSDYDVRF YVHRP W Sbjct: 17 YDHPVSDAVRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFAYVHRPAW 76 Query: 79 YLTVFPGRDVIELPVNATYDVSGWDLRKTLALLHNGNATVVEWLSSPVVYRADVSFVDKI 138 YL+V P RDVIE+P++ DV GW+LRK L L+H N T++EWL+SP+VYR D + ++ Sbjct: 77 YLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDAAAAQRM 136 Query: 139 NAAADLVHRPDRVFHHYLQMARKNYREYLKGERVRLKKYLYVLRPLMAALWVEQQRGPVP 198 A R HYL MA KN+R YL+GE VRLKKYLYVLRPL+AA W++ RG P Sbjct: 137 RTLAPTFFSERRGRWHYLSMAAKNFRGYLQGETVRLKKYLYVLRPLLAAQWIDAGRGMPP 196 Query: 199 MRFLDLVEAIVSDAALRPAIDALLVIKRRAGEAEEGAAIPEINRFIELELQRLEHVPTPR 258 MRF DL +A+V+DA+LR I+ LL IK A EAE G P I+ F+E L E VP Sbjct: 197 MRFADLADAMVTDASLRDEINQLLAIKMAASEAEYGVRFPRIHAFVEQALAA-EAVPAEF 255 Query: 259 KDERGEYSVLDRLLRDVVM 277 + G+ + LD L VM Sbjct: 256 RQGSGDPAALDAFLYATVM 274 >ref|YP_003753794.1| hypothetical protein RPSI07_3185 [Ralstonia solanacearum PSI07] emb|CBJ52537.1| conserved protein of unknown function (nucleotidyltransferase) [Ralstonia solanacearum PSI07] emb|CCA80329.1| conserved hypothetical protein (nucleotidyltransferase) [blood disease bacterium R229] Length = 281 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 142/259 (54%), Positives = 174/259 (67%), Gaps = 1/259 (0%) Query: 19 HEHPIDPQIRAEIDKTLARIESEHQVRVLFACESGSRGWGFASPDSDYDVRFIYVHRPDW 78 ++HP+ IRA + LA IE H VRVLFACESGSRGWGFASPDSDYDVRF+YVHRP W Sbjct: 17 YDHPVSDDIRARVLSELADIERRHDVRVLFACESGSRGWGFASPDSDYDVRFVYVHRPAW 76 Query: 79 YLTVFPGRDVIELPVNATYDVSGWDLRKTLALLHNGNATVVEWLSSPVVYRADVSFVDKI 138 YL+V P RDVIE+P++ DV GW+LRK L L+H N T++EWL+SP+VYR D ++ Sbjct: 77 YLSVEPQRDVIEVPISDELDVGGWELRKALQLMHRSNPTLLEWLASPIVYREDPDAARRM 136 Query: 139 NAAADLVHRPDRVFHHYLQMARKNYREYLKGERVRLKKYLYVLRPLMAALWVEQQRGPVP 198 A R HYL MA KN+R YL+GE VRLKKYLYVLRPL+AA W++ RG P Sbjct: 137 RTLAPTFFSERRGRWHYLSMAAKNFRGYLQGETVRLKKYLYVLRPLLAAQWIDAGRGMPP 196 Query: 199 MRFLDLVEAIVSDAALRPAIDALLVIKRRAGEAEEGAAIPEINRFIELELQRLEHVPTPR 258 MRF DL + +V+DA LR I+ LL IK + EAE GA P I+ F+E L E VPT Sbjct: 197 MRFADLADVMVTDAQLRQEINQLLAIKMESSEAEYGARFPRIHAFVEQALAA-EAVPTDF 255 Query: 259 KDERGEYSVLDRLLRDVVM 277 + G+ + LD L VM Sbjct: 256 RQGSGDPAALDAFLYASVM 274