BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1403.p (396 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004157377.1| trove domain-containing protein [Variovorax ... 447 e-123 gb|EGY53080.1| TROVE domain protein [Neisseria shayeganii 871] 427 e-117 ref|ZP_05706519.1| TROVE domain protein [Cardiobacterium hominis... 424 e-116 ref|ZP_05705436.1| TROVE domain protein [Cardiobacterium hominis... 421 e-116 ref|YP_004232509.1| TROVE domain-containing protein [Acidovorax ... 419 e-115 >ref|YP_004157377.1| trove domain-containing protein [Variovorax paradoxus EPS] gb|ADU39266.1| TROVE domain-containing protein [Variovorax paradoxus EPS] Length = 517 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 239/356 (67%), Positives = 280/356 (78%) Query: 1 MANVQLFQTLKRRLLPAADAMNHAGGAAYALSKEHILAQYAATGCLNRTFYASAEAQLAT 60 MAN+QLFQT + LLP+A+A+N AGG AYALS +H LAQ AATGCLN TFYA A+ QL Sbjct: 1 MANLQLFQTQRGALLPSANALNEAGGVAYALSPKHQLAQLAATGCLNNTFYAHAQDQLDA 60 Query: 61 VLELSQDIAPRFIAQTALYARRRSYMKDMPALLLAVLAARGADELAPAFAGVVDQGKMLR 120 VL L++++ P F+A+TA+YARR +MKDMPALL A LA R LA F VVD GKMLR Sbjct: 61 VLALAREVDPVFVAKTAVYARRAGHMKDMPALLAATLAVRDVSLLAKVFPRVVDNGKMLR 120 Query: 121 NFVQILRSGVTGRKSLGTRPKKLVQAWLNQANEQQLLAACVGQSPSLADVVRMVHPKPAE 180 NFVQ+LRSG GRKSLGTRPKKLVQ WL QA E QLL A VG +PSLADVV+MVHPKPAE Sbjct: 121 NFVQMLRSGAVGRKSLGTRPKKLVQQWLLQATEAQLLNASVGNTPSLADVVKMVHPKPAE 180 Query: 181 PWRAAFFAWLIGRPFDEAALPPLTRALRAYQRDRSQPVPAVPFQLLTAMQPGTQEWAGMA 240 WRAA+FAWLI RP+ ALPP+T+A ++RDRS VP VPFQ+LTA++ Q WA +A Sbjct: 181 AWRAAWFAWLIDRPYALEALPPVTQAFERFKRDRSLEVPDVPFQMLTALELDAQGWAQIA 240 Query: 241 RQGGWHMVRMNLNSFARHGVFELPGMTELIAAKLCDPQAIAAARVFPYQLMAAWQAAAGT 300 ++G W MVR NLN+FARHGVFELPG+ + +AAKL DPQA+A ARV PYQLMAA+ A Sbjct: 241 QRGSWQMVRQNLNTFARHGVFELPGLAKAVAAKLRDPQAVAKARVLPYQLMAAFTATGAE 300 Query: 301 VPELVRDALQSAMEIALANVPVLEGSVVVCPDVSGSMSSPVSGMRAGGTSAVRCID 356 VP +V++ALQ AME+ALANVPV EG VVVCPDVSGSMSSPV+G R TSAVRCID Sbjct: 301 VPHVVKEALQDAMELALANVPVFEGRVVVCPDVSGSMSSPVTGHRGSATSAVRCID 356 >gb|EGY53080.1| TROVE domain protein [Neisseria shayeganii 871] Length = 545 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 226/367 (61%), Positives = 268/367 (73%), Gaps = 6/367 (1%) Query: 1 MANVQLFQTLKRRLL------PAADAMNHAGGAAYALSKEHILAQYAATGCLNRTFYASA 54 MAN LFQ++K RL AAD N AGG AYAL+ + LAQ AATGCLN T+YA A Sbjct: 17 MANSNLFQSIKNRLRGQSLQEAAADTRNQAGGLAYALTPKQQLAQLAATGCLNNTYYADA 76 Query: 55 EAQLATVLELSQDIAPRFIAQTALYARRRSYMKDMPALLLAVLAARGADELAPAFAGVVD 114 E QL ++EL+ + FIAQTALYAR +YMKDMPALLLAVLA + LA F V D Sbjct: 77 EDQLNQIIELAAQLDADFIAQTALYARETAYMKDMPALLLAVLAQKDVSMLARVFDQVAD 136 Query: 115 QGKMLRNFVQILRSGVTGRKSLGTRPKKLVQAWLNQANEQQLLAACVGQSPSLADVVRMV 174 GKMLRNFVQI+RSG GR+S G+RPKKL+Q WL A+E+QLL A +G PSLAD+V+MV Sbjct: 137 NGKMLRNFVQIIRSGAVGRQSFGSRPKKLIQHWLLTADEKQLLNAAIGNRPSLADIVKMV 196 Query: 175 HPKPAEPWRAAFFAWLIGRPFDEAALPPLTRALRAYQRDRSQPVPAVPFQLLTAMQPGTQ 234 HPKP E WRAA+FAWL+G+PFD A LPPLTRA AY+R+RS P+P VPFQ+LTA+ Sbjct: 197 HPKPQESWRAAWFAWLVGKPFDTAELPPLTRAFEAYKRERSGPLPEVPFQMLTALPLNKG 256 Query: 235 EWAGMARQGGWHMVRMNLNSFARHGVFELPGMTELIAAKLCDPQAIAAARVFPYQLMAAW 294 +WA +AR G W VR +LN+F RHGVFE + +A KL DP AIA ARV PYQL+ A+ Sbjct: 257 DWAQIARNGSWQQVRQSLNTFHRHGVFEKQANIKQVAQKLRDPAAIARARVLPYQLLTAF 316 Query: 295 QAAAGTVPELVRDALQSAMEIALANVPVLEGSVVVCPDVSGSMSSPVSGMRAGGTSAVRC 354 QA + +P +RDALQ AMEIA+ NVPVL+G VVVCPDVSGSM SPVSG R TS RC Sbjct: 317 QATSDQLPAAIRDALQDAMEIAVQNVPVLDGKVVVCPDVSGSMHSPVSGCRGSVTSVTRC 376 Query: 355 IDVAALL 361 IDVAAL+ Sbjct: 377 IDVAALM 383 >ref|ZP_05706519.1| TROVE domain protein [Cardiobacterium hominis ATCC 15826] gb|EEV87315.1| TROVE domain protein [Cardiobacterium hominis ATCC 15826] Length = 564 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 222/369 (60%), Positives = 267/369 (72%), Gaps = 9/369 (2%) Query: 1 MANVQLFQTLKRRLLPAADAMNHAGGAAYALSKEHILAQYAATGCLNRTFYASAEAQLAT 60 MAN +LF + K++ A D N AGG AY + LAQ AATGCLN T+YASAE+QL Sbjct: 36 MANFKLFPSRKQKQ-TATDTYNEAGGRAYTQTPAQQLAQLAATGCLNSTYYASAESQLTQ 94 Query: 61 VLELSQDIAPRFIAQTALYARRRSYMKDMPALLLAVLAARGADELAPAFAGVVDQGKMLR 120 VLEL++ ++P F+A+TA+YAR R YMKDMPALLLAVLA R A F VVD GKMLR Sbjct: 95 VLELARQVSPEFLAKTAIYARERGYMKDMPALLLAVLAVRDVALCAAVFDRVVDSGKMLR 154 Query: 121 NFVQILRSGVTGRKSLGTRPKKLVQAWLNQANEQQLLAACVGQSPSLADVVRMVHPKPAE 180 NF QI+RSGV GRKS GTRPKKL+Q WLN A E QLL A +G +PSLADVV+MVHP+P E Sbjct: 155 NFAQIVRSGVVGRKSFGTRPKKLIQHWLNTATETQLLNAAIGNNPSLADVVKMVHPQPRE 214 Query: 181 PWRAAFFAWLIGRPFDEAALPPLTRALRAYQRDRSQP---VPAVPFQLLTAMQPGTQEWA 237 WRAA+FAWLIG+P++ AALPPLT A Y+R++S+P +P VPFQ+LTA+ WA Sbjct: 215 AWRAAWFAWLIGKPYEYAALPPLTAAFETYKRNKSKPRGALPPVPFQMLTALNLDGDAWA 274 Query: 238 GMARQGGWHMVRMNLNSFARHGVFELPGMTE-----LIAAKLCDPQAIAAARVFPYQLMA 292 +A+ G W VR NLN+FARHGVF+ + +AAKL DP AIA A PYQL+ Sbjct: 275 QIAKNGSWQQVRQNLNTFARHGVFDKDKHNKDRHIRSVAAKLRDPAAIARAHAMPYQLLT 334 Query: 293 AWQAAAGTVPELVRDALQSAMEIALANVPVLEGSVVVCPDVSGSMSSPVSGMRAGGTSAV 352 WQAA +P +RDALQ AMEIA+ NVP L G++VVCPDVSGSM SPV+G RAG TS Sbjct: 335 TWQAAGDAIPGTIRDALQDAMEIAVQNVPQLPGNIVVCPDVSGSMQSPVTGYRAGATSKT 394 Query: 353 RCIDVAALL 361 RCIDVAAL+ Sbjct: 395 RCIDVAALI 403 >ref|ZP_05705436.1| TROVE domain protein [Cardiobacterium hominis ATCC 15826] gb|EEV88413.1| TROVE domain protein [Cardiobacterium hominis ATCC 15826] Length = 518 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 219/361 (60%), Positives = 262/361 (72%), Gaps = 4/361 (1%) Query: 1 MANVQLFQTLKRRLLPAADAMNHAGGAAYALSKEHILAQYAATGCLNRTFYASAEAQLAT 60 MAN +F + K + D N AGG AYALS E LAQ AATGC N TFYASAE QL Sbjct: 1 MANFNIFSSAKNK----TDTRNEAGGRAYALSPEQQLAQLAATGCFNDTFYASAETQLEK 56 Query: 61 VLELSQDIAPRFIAQTALYARRRSYMKDMPALLLAVLAARGADELAPAFAGVVDQGKMLR 120 +L ++Q I P FIA+TA+YAR R YMKDMPALLLA+LA A F V+D GKMLR Sbjct: 57 ILNIAQKIEPLFIAKTAIYARERGYMKDMPALLLAILAEHDVALCAQIFNQVIDNGKMLR 116 Query: 121 NFVQILRSGVTGRKSLGTRPKKLVQAWLNQANEQQLLAACVGQSPSLADVVRMVHPKPAE 180 NF Q++RSGVTGRKS GTRPKKL+Q WL ANE+QLL A +G PSLADVV+MVHPKP E Sbjct: 117 NFAQMVRSGVTGRKSFGTRPKKLMQQWLLSANEKQLLQAAIGNKPSLADVVKMVHPKPRE 176 Query: 181 PWRAAFFAWLIGRPFDEAALPPLTRALRAYQRDRSQPVPAVPFQLLTAMQPGTQEWAGMA 240 WRAA+FAWLIG+P++ +ALPPLTRA Y+ R +P VPFQ+LTA++ + WA +A Sbjct: 177 AWRAAWFAWLIGKPYEYSALPPLTRAFEDYKSGRRGELPDVPFQMLTALELDSAAWAQIA 236 Query: 241 RQGGWHMVRMNLNSFARHGVFELPGMTELIAAKLCDPQAIAAARVFPYQLMAAWQAAAGT 300 R G W VR +LN+FARHG+F G+ +AAKL D AIA ARV PYQL+ A+QA Sbjct: 237 RNGSWQQVRQSLNTFARHGLFNDEGIVRHVAAKLADKNAIAKARVMPYQLLTAYQATGDA 296 Query: 301 VPELVRDALQSAMEIALANVPVLEGSVVVCPDVSGSMSSPVSGMRAGGTSAVRCIDVAAL 360 +P +R+ALQ AMEIA+ NVP L G +VVCPDVSGSM+SPVSG R G T+A RC+DVAAL Sbjct: 297 MPHAIREALQDAMEIAVQNVPRLAGHIVVCPDVSGSMNSPVSGFRQGATTATRCVDVAAL 356 Query: 361 L 361 L Sbjct: 357 L 357 >ref|YP_004232509.1| TROVE domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX43942.1| TROVE domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 524 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 231/360 (64%), Positives = 270/360 (75%), Gaps = 4/360 (1%) Query: 1 MANVQLFQTLKRRLLPAADAMNHAGGAAYALSKEHILAQYAATGCLNRTFYASAEAQLAT 60 M N QLFQTLK RLLP A A N A AYA H LAQ AATGCL+RTFYA A+ QL Sbjct: 1 MVNTQLFQTLKARLLPEATACNAAQAPAYAFGPRHQLAQLAATGCLSRTFYADAQDQLDQ 60 Query: 61 VLELSQDIAPRFIAQTALYARRRSYMKDMPALLLAVLAARGADELAPAFAGVVDQGKMLR 120 V L++ + P F+A+TALYAR +MKDMPALL A LA R L F VVD GKMLR Sbjct: 61 VTALARALEPSFLARTALYARESGHMKDMPALLAAHLAVRDVALLGQVFGRVVDNGKMLR 120 Query: 121 NFVQILRSGVTGRKSLGTRPKKLVQAWLNQANEQQLLAACVGQSPSLADVVRMVHPKPAE 180 NFVQI+RSG GRKSLGTRPKKLVQ WL A+E+QLL A VG +PSLADVV+MVHPKPAE Sbjct: 121 NFVQIVRSGAVGRKSLGTRPKKLVQQWLLAASEKQLLNAAVGNTPSLADVVKMVHPKPAE 180 Query: 181 PWRAAFFAWLIGRPFDEAALPPLTRALRAYQRDRSQ----PVPAVPFQLLTAMQPGTQEW 236 WRAA+FAWL+G+P DEAALPP+T+A ++R+ +Q VP VPFQ+LT ++ G +W Sbjct: 181 AWRAAWFAWLLGKPVDEAALPPITQAFERFKRESAQGLATDVPDVPFQMLTTLELGPAQW 240 Query: 237 AGMARQGGWHMVRMNLNSFARHGVFELPGMTELIAAKLCDPQAIAAARVFPYQLMAAWQA 296 A +AR G W MVR NLN+FARHGVF LPGM E +AAKL DPQA+A ARV PYQL++A++A Sbjct: 241 AQIARAGSWQMVRQNLNTFARHGVFGLPGMAEAVAAKLADPQAVAKARVMPYQLLSAFKA 300 Query: 297 AAGTVPELVRDALQSAMEIALANVPVLEGSVVVCPDVSGSMSSPVSGMRAGGTSAVRCID 356 A VPE VRDALQ AME++LA+VP +G VVVCPDVSGSM SPV+G R TS VRCID Sbjct: 301 AGDAVPEAVRDALQDAMELSLAHVPAFQGRVVVCPDVSGSMGSPVTGYRGTATSRVRCID 360