BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1391.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775461.1| flagellar transmembrane protein FliL [Herbas... 293 5e-78 ref|ZP_08272770.1| Flagellar biosynthesis protein fliL [Oxalobac... 151 3e-35 ref|YP_546080.1| flagellar basal body-associated protein FliL [M... 122 2e-26 ref|YP_003048369.1| flagellar basal body-associated protein FliL... 120 5e-26 ref|YP_001100158.1| flagellar basal body-associated protein FliL... 120 8e-26 >ref|YP_003775461.1| flagellar transmembrane protein FliL [Herbaspirillum seropedicae SmR1] gb|ADJ63553.1| flagellar FliL transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 171 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 167/171 (97%), Positives = 169/171 (98%) Query: 1 MATKGKAPAKGAEADAAPAKSSKKMLFIIVGAVLVLVIGGAAAFFMMGGKGKKGDDHAEE 60 MATKGKAPAKGAEADAAPAKSSKKMLFIIVGAVLVLVIGGAAAFFMMGGKGKKG+DHAEE Sbjct: 1 MATKGKAPAKGAEADAAPAKSSKKMLFIIVGAVLVLVIGGAAAFFMMGGKGKKGEDHAEE 60 Query: 61 KVEAKTPTFVVIEPFVVNLQQETGDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVL 120 K EAK PTFVVIEPFVVNLQQE+GDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVL Sbjct: 61 KAEAKAPTFVVIEPFVVNLQQESGDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVL 120 Query: 121 SSKKASELLTSEGKRRLTDEIIDQLGEPFSGKGKGPQITDVFYTSFVIQQQ 171 SSKKASELLTSEGKRRLTDEIIDQLGEPFSGKGKGPQITDVFYTSFVIQQQ Sbjct: 121 SSKKASELLTSEGKRRLTDEIIDQLGEPFSGKGKGPQITDVFYTSFVIQQQ 171 >ref|ZP_08272770.1| Flagellar biosynthesis protein fliL [Oxalobacteraceae bacterium IMCC9480] gb|EGF33769.1| Flagellar biosynthesis protein fliL [Oxalobacteraceae bacterium IMCC9480] Length = 173 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 82/140 (58%), Positives = 110/140 (78%), Gaps = 2/140 (1%) Query: 32 AVLVLVI-GGAAAFFMMGGKGKKGDDHAEEKVEA-KTPTFVVIEPFVVNLQQETGDQYLQ 89 AV+VL + GG A +F+MG K K +HAEE EA K P F+V++PF VNLQQE GDQYLQ Sbjct: 34 AVVVLALAGGGAGYFLMGKKAKPAGEHAEESHEAAKAPVFLVLDPFTVNLQQEAGDQYLQ 93 Query: 90 VAMTLQVPDGQTAEALKLYMPQVRSRLLMVLSSKKASELLTSEGKRRLTDEIIDQLGEPF 149 +AMT+QV D + +E +K+Y+PQ+RSR+LMVLSSKKASE+ T +GK++L D+II + +PF Sbjct: 94 IAMTVQVADDKQSEEIKVYLPQIRSRVLMVLSSKKASEINTPDGKKQLADDIITAIKKPF 153 Query: 150 SGKGKGPQITDVFYTSFVIQ 169 S +GK ++ DVF+TSFVIQ Sbjct: 154 SERGKPQKVNDVFFTSFVIQ 173 >ref|YP_546080.1| flagellar basal body-associated protein FliL [Methylobacillus flagellatus KT] gb|ABE50239.1| flagellar basal body-associated protein FliL [Methylobacillus flagellatus KT] Length = 168 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 35 VLVIG-GAAAFFMMGGKGKKGDDHAEEKVEAKTPTFVVIEPFVVNLQQETGDQYLQVAMT 93 V V+G G A +++ G + D EEKV AK P FV ++ F VNLQ + DQYLQV +T Sbjct: 33 VAVLGAGGAYWYLKQHDGNQQDKPREEKVVAKEPVFVTLDTFTVNLQPDPDDQYLQVDLT 92 Query: 94 LQVPDGQTAEALKLYMPQVRSRLLMVLSSKKASELLTSEGKRRLTDEIIDQLGEPFSGKG 153 +QV D A+ +K +MP VR+R+L++LSSKK+SELL +GK+ L EII QL EPFS Sbjct: 93 VQVEDQAQADIIKKHMPSVRNRILILLSSKKSSELLNIDGKKALASEIIAQLSEPFSPGA 152 Query: 154 KGPQITDVFYTSFVIQ 169 K ++DVF+TSFVIQ Sbjct: 153 KPQAVSDVFFTSFVIQ 168 >ref|YP_003048369.1| flagellar basal body-associated protein FliL [Methylotenera mobilis JLW8] gb|ACT47842.1| flagellar basal body-associated protein FliL [Methylotenera mobilis JLW8] Length = 163 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 110/158 (69%), Gaps = 2/158 (1%) Query: 12 AEADAAPAKSSKKMLFIIVGAVLVLVIGGAAAFFMMGGKGKKGDDHAEEKVEAKTPTFVV 71 A +AAPA SKK L II+ AV++ + GG AA+F+ K + +++ AK P F+ Sbjct: 8 APEEAAPA--SKKKLIIIIAAVVLALGGGGAAWFLTQQKSHAKKEEVKKEEPAKAPVFLT 65 Query: 72 IEPFVVNLQQETGDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVLSSKKASELLTS 131 ++ F VNLQ + +++LQV ++LQV + AEA+KL+MP V++RLL++L+SK A+E+ T Sbjct: 66 LDTFTVNLQPDPDEKFLQVDISLQVASAEAAEAIKLHMPAVKNRLLLLLTSKSAAEISTV 125 Query: 132 EGKRRLTDEIIDQLGEPFSGKGKGPQITDVFYTSFVIQ 169 EGK+ L++EII ++ +PF+ K ++ DVF+TSFV+Q Sbjct: 126 EGKQDLSNEIIAEVKKPFAPNAKPQEVLDVFFTSFVVQ 163 >ref|YP_001100158.1| flagellar basal body-associated protein FliL [Herminiimonas arsenicoxydans] gb|AAV68362.1| FliL [Herminiimonas arsenicoxydans] emb|CAL62034.1| Flagellar FliL protein [Herminiimonas arsenicoxydans] Length = 166 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 74/169 (43%), Positives = 109/169 (64%), Gaps = 3/169 (1%) Query: 1 MATKGKAPAKGAEADAAPAKSSKKMLFIIVGAVLVLVIGGAAAFFMMGGKGKKGDDHAEE 60 MATK A +A P KS ++L I++ ++++ GGA A++ +G K Sbjct: 1 MATKAAPKTTSANVEAKPKKS--RILIIVLALLIIMAAGGAGAWYFLGQKAAA-QPAKAA 57 Query: 61 KVEAKTPTFVVIEPFVVNLQQETGDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVL 120 VEAK P F+ +E F VNLQ E G+Q+LQ + TLQV D + +KLYMP VRSR+L++L Sbjct: 58 HVEAKPPVFLPMEAFTVNLQSENGEQFLQTSFTLQVLDQAQVDLIKLYMPHVRSRILLLL 117 Query: 121 SSKKASELLTSEGKRRLTDEIIDQLGEPFSGKGKGPQITDVFYTSFVIQ 169 SSKKASE+L+ EGK +L +EII+ +PF+ +G +++ V +TSFV+Q Sbjct: 118 SSKKASEILSVEGKTKLAEEIINIFKQPFTPQGPTVKVSSVLFTSFVVQ 166