BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1375.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775448.1| flagellar basal-body P-ring protein [Herbasp... 528 e-148 ref|YP_001353115.1| flagellar basal body P-ring protein [Janthin... 447 e-123 ref|YP_001100168.1| flagellar basal body P-ring protein [Hermini... 419 e-115 ref|YP_003674669.1| flagellar P-ring protein [Methylotenera vers... 419 e-115 ref|YP_003050547.1| flagellar P-ring protein [Methylovorus gluco... 417 e-114 >ref|YP_003775448.1| flagellar basal-body P-ring protein [Herbaspirillum seropedicae SmR1] gb|ADJ63540.1| flagellar basal-body P-ring protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 352/376 (93%), Positives = 363/376 (96%) Query: 14 MDMIRMGSKLLSAAAVAALCVAAAAPAHAERLKDLASIQGVRQNQLVGYGLVVGLDGSGD 73 M R+G KLL AA VAAL +AAA PA AERLKDLASIQGVRQNQLVGYGLVVGLDGSGD Sbjct: 1 MQWTRIGRKLLGAAGVAALALAAAMPAQAERLKDLASIQGVRQNQLVGYGLVVGLDGSGD 60 Query: 74 QTTQTPFTVQSVVSMLQQLGVNVPSGTSSNMQLKNVAAAMVTATLPAFAQPGQLIDVTVS 133 QTTQTPFTVQSV+SMLQQLGVNVP+GTSSNMQLKNVAAAMVTA LPAFAQPGQLIDVTVS Sbjct: 61 QTTQTPFTVQSVISMLQQLGVNVPTGTSSNMQLKNVAAAMVTANLPAFAQPGQLIDVTVS 120 Query: 134 SIGNAKSIRGGTLLMAPLKGADGQIYAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGG 193 SIGNAKSIRGGTLLMAPLKGADGQIYAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGG Sbjct: 121 SIGNAKSIRGGTLLMAPLKGADGQIYAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGG 180 Query: 194 ATVERAVPSSLGGGDMVMLELNDNDFSTASRVVDALNKRFGSDTAVAQDARVIRVRAPIS 253 ATVERAVPSSLG DM++LELNDNDFSTASRVVDALNKRFG++TAVAQD RVIRVRAPIS Sbjct: 181 ATVERAVPSSLGSSDMIVLELNDNDFSTASRVVDALNKRFGNETAVAQDGRVIRVRAPIS 240 Query: 254 SGDRVAFLGALENVDVTPGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADN 313 SGDRVAFLGALENVDVTPGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADN Sbjct: 241 SGDRVAFLGALENVDVTPGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADN 300 Query: 314 AVSQPNALAGGQTAGVQNAQVSINKEPGKVMLLKGGASLSDVVKALNAIGATPQDLLAIL 373 AVSQPNALAGGQTAGVQNAQ+SINKEPGKVMLLKGGASL++VVKALNAIGATPQDLLAIL Sbjct: 301 AVSQPNALAGGQTAGVQNAQISINKEPGKVMLLKGGASLAEVVKALNAIGATPQDLLAIL 360 Query: 374 QAMKAAGSLRAELEVI 389 QAMKAAGSLRAELEVI Sbjct: 361 QAMKAAGSLRAELEVI 376 >ref|YP_001353115.1| flagellar basal body P-ring protein [Janthinobacterium sp. Marseille] gb|ABR89111.1| FlgI flagellar basal-body P-ring protein [Janthinobacterium sp. Marseille] Length = 375 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 268/359 (74%), Positives = 311/359 (86%), Gaps = 2/359 (0%) Query: 31 ALCVAAAAPAHAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVVSMLQ 90 ++C+ AH+ERLKDLAS+QGVRQNQL+GYGLVVGLDGSGDQTTQTPFT+QS+VSM+Q Sbjct: 19 SVCLLLPFAAHSERLKDLASVQGVRQNQLIGYGLVVGLDGSGDQTTQTPFTIQSIVSMMQ 78 Query: 91 QLGVNVPSGTSSNMQLKNVAAAMVTATLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAP 150 Q+GVN+P G NMQLKNVAA MVT +LPAFAQPGQ +D+TVSS+GNAKS+RGGTLLM P Sbjct: 79 QMGVNLPQGV--NMQLKNVAAVMVTTSLPAFAQPGQTLDITVSSMGNAKSLRGGTLLMTP 136 Query: 151 LKGADGQIYAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGGATVERAVPSSLGGGDMV 210 LKGADGQIY +AQGN+VVGG G +A GS IN L GRIS GATVERAVPSSLG GD + Sbjct: 137 LKGADGQIYGMAQGNVVVGGVGAAANGSKAQINHLGVGRISAGATVERAVPSSLGQGDQI 196 Query: 211 MLELNDNDFSTASRVVDALNKRFGSDTAVAQDARVIRVRAPISSGDRVAFLGALENVDVT 270 +LEL D+DFSTASRVVDA+NKRFG DTA AQD RVIRVRAPIS+ +RV+FLGALE+++VT Sbjct: 197 VLELKDSDFSTASRVVDAVNKRFGPDTAAAQDGRVIRVRAPISNDERVSFLGALESINVT 256 Query: 271 PGKLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQ 330 P +++AKVILNARTGSVVMNQ+V LDTCAVSHGNLSVVI +SQP +GGQT Q Sbjct: 257 PAQVSAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINTQPVISQPAPFSGGQTVVAQ 316 Query: 331 NAQVSINKEPGKVMLLKGGASLSDVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 389 +Q+ INK+PGKV+LLK ASL+DVVKALN+IGATPQDLLAILQAMKA+GSLRAELE+I Sbjct: 317 QSQIEINKDPGKVILLKNSASLADVVKALNSIGATPQDLLAILQAMKASGSLRAELEII 375 >ref|YP_001100168.1| flagellar basal body P-ring protein [Herminiimonas arsenicoxydans] emb|CAL62044.1| Flagellar P-ring protein precursor (Basal body P-ring protein) [Herminiimonas arsenicoxydans] Length = 377 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 257/357 (71%), Positives = 304/357 (85%), Gaps = 2/357 (0%) Query: 33 CVAAAAPAHAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVVSMLQQL 92 C+ + AERLKDL S+QGVRQNQL+GYGLVVGLDGSGDQTTQTPFTVQSV+SM+QQ+ Sbjct: 23 CLLMPLASQAERLKDLTSVQGVRQNQLIGYGLVVGLDGSGDQTTQTPFTVQSVISMMQQM 82 Query: 93 GVNVPSGTSSNMQLKNVAAAMVTATLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLK 152 G+N+P GT N+QLKNVAA MVT++LPAFAQPGQ +D+TVSS+GNAKS+RGGTLLM PLK Sbjct: 83 GINLPQGT--NLQLKNVAAVMVTSSLPAFAQPGQTLDITVSSMGNAKSLRGGTLLMTPLK 140 Query: 153 GADGQIYAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGGATVERAVPSSLGGGDMVML 212 GADGQIY +AQGN+VVGGAG +A GS IN LS GRIS GATVERAV ++LG GD++ L Sbjct: 141 GADGQIYGMAQGNVVVGGAGAAANGSKAQINHLSVGRISAGATVERAVATTLGQGDVIFL 200 Query: 213 ELNDNDFSTASRVVDALNKRFGSDTAVAQDARVIRVRAPISSGDRVAFLGALENVDVTPG 272 EL ++DFSTASRVVDA+N RFG TA AQD RVIRVRAP S+ +RV+FLGALE+++VTP Sbjct: 201 ELKESDFSTASRVVDAVNARFGPQTAAAQDGRVIRVRAPASNDERVSFLGALESINVTPA 260 Query: 273 KLAAKVILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQNA 332 +++AKVI+NARTGSVVMNQ+V LD CAVSHGNLSV I +SQP +GGQT Q + Sbjct: 261 QVSAKVIMNARTGSVVMNQAVTLDACAVSHGNLSVTINTQPVISQPAPFSGGQTVVAQQS 320 Query: 333 QVSINKEPGKVMLLKGGASLSDVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 389 Q+ I+KEPGKV+LLK SL+DVVKALN+IGATPQDLLAILQAMKA+GSLRAELE+I Sbjct: 321 QIEISKEPGKVILLKNSTSLADVVKALNSIGATPQDLLAILQAMKASGSLRAELEII 377 >ref|YP_003674669.1| flagellar P-ring protein [Methylotenera versatilis 301] gb|ADI30092.1| flagellar P-ring protein [Methylotenera versatilis 301] Length = 377 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 246/351 (70%), Positives = 295/351 (84%), Gaps = 6/351 (1%) Query: 39 PAHAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVVSMLQQLGVNVPS 98 PAHAERLKDLA+IQGVR NQL+GYGLVVGLDG+GDQT P+TVQS++SM+QQ+GVN+P+ Sbjct: 33 PAHAERLKDLATIQGVRNNQLIGYGLVVGLDGTGDQT---PYTVQSMISMMQQMGVNLPA 89 Query: 99 GTSSNMQLKNVAAAMVTATLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQI 158 GTS +Q+KNVA+ ++T +LPAFAQPGQ +DVTVSS+G+AKS+RGGTLLM PLKGADGQI Sbjct: 90 GTS--IQMKNVASVIITGSLPAFAQPGQTLDVTVSSMGSAKSLRGGTLLMTPLKGADGQI 147 Query: 159 YAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGGATVERAVPSSLGGGDMVMLELNDND 218 YA+AQGN+VVGG G SA GS T IN LS GRIS GATVER++P+++ D V LEL ++D Sbjct: 148 YAMAQGNLVVGGVGASANGSQTQINHLSVGRISDGATVERSIPNTINLTDNVNLELKESD 207 Query: 219 FSTASRVVDALNKRFGSDTAVAQDARVIRVRAPISSGDRVAFLGALENVDVTPGKLAAKV 278 FSTAS V DA+NKRFG +TA+AQD RVIRV+AP +S RV+FL LE ++V P AK+ Sbjct: 208 FSTASLVADAINKRFGQNTALAQDGRVIRVQAPANS-SRVSFLADLEKINVAPAPTNAKI 266 Query: 279 ILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQNAQVSINK 338 I+NARTGSVVMNQ+V L++CAVSHGNLSVVI D +SQP AL+ GQT +Q+ INK Sbjct: 267 IMNARTGSVVMNQAVTLESCAVSHGNLSVVINTDPVISQPGALSSGQTISTARSQIEINK 326 Query: 339 EPGKVMLLKGGASLSDVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 389 EPGKV+ L GA+LSDVVKALNAIGATPQDLLAILQAMKAAGSL A+LEVI Sbjct: 327 EPGKVLKLNSGANLSDVVKALNAIGATPQDLLAILQAMKAAGSLHADLEVI 377 >ref|YP_003050547.1| flagellar P-ring protein [Methylovorus glucosetrophus SIP3-4] ref|YP_004039217.1| flagellar p-ring protein [Methylovorus sp. MP688] gb|ACT50020.1| flagellar P-ring protein [Methylovorus glucosetrophus SIP3-4] gb|ADQ83981.1| flagellar P-ring protein [Methylovorus sp. MP688] Length = 374 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 255/351 (72%), Positives = 293/351 (83%), Gaps = 3/351 (0%) Query: 39 PAHAERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVVSMLQQLGVNVPS 98 P AERLKDLA+IQGVR NQL+GY LVVGLDG+GDQTTQTPFTVQS++SMLQ +GV +P Sbjct: 27 PVEAERLKDLATIQGVRSNQLIGYSLVVGLDGTGDQTTQTPFTVQSLISMLQGMGVTLPQ 86 Query: 99 GTSSNMQLKNVAAAMVTATLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQI 158 GT N+QLKNVAA MVTATLP FAQPGQ +DVTVSS+GNAKS+RGGTLLM PLKGAD Q+ Sbjct: 87 GT--NLQLKNVAAVMVTATLPPFAQPGQALDVTVSSMGNAKSLRGGTLLMTPLKGADNQV 144 Query: 159 YAIAQGNIVVGGAGGSAAGSSTVINQLSAGRISGGATVERAVPSSLGGGDMVMLELNDND 218 YA+AQGN+VVGG G SA GS T IN L GRIS GATVERAVP +L G + LEL D+D Sbjct: 145 YAMAQGNLVVGGVGASANGSQTQINHLGVGRISAGATVERAVPVALNQGTGINLELKDSD 204 Query: 219 FSTASRVVDALNKRFGSDTAVAQDARVIRVRAPISSGDRVAFLGALENVDVTPGKLAAKV 278 FSTAS+VVDA+N+RFG+ TA AQD RVIRV AP S RV+FL ALE+++V P + +AKV Sbjct: 205 FSTASKVVDAINQRFGTGTAAAQDGRVIRVNAPADS-SRVSFLAALESINVNPAESSAKV 263 Query: 279 ILNARTGSVVMNQSVMLDTCAVSHGNLSVVIQADNAVSQPNALAGGQTAGVQNAQVSINK 338 ILNARTGSVVMN+SV L+ CAVSHGNLSVVI +SQP AL+GGQT +++SI K Sbjct: 264 ILNARTGSVVMNRSVSLEDCAVSHGNLSVVINTAPVISQPGALSGGQTVSTARSEISIEK 323 Query: 339 EPGKVMLLKGGASLSDVVKALNAIGATPQDLLAILQAMKAAGSLRAELEVI 389 EPGKV+ L GGASLSDV+KALNAIGATPQDLLAILQAMK+AG+LRAELEVI Sbjct: 324 EPGKVLKLDGGASLSDVIKALNAIGATPQDLLAILQAMKSAGALRAELEVI 374