BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1352.p (552 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775427.1| methyl-accepting chemotaxis protein [Herbasp... 787 0.0 emb|CAM32673.2| methyl-accepting chemotaxis protein [Herbaspiril... 781 0.0 ref|YP_001353185.1| methyl-accepting chemotaxis protein [Janthin... 634 e-179 ref|YP_001100073.1| putative methyl-accepting chemotaxis protein... 632 e-179 ref|ZP_08274886.1| methyl-accepting chemotaxis sensory transduce... 487 e-135 >ref|YP_003775427.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ63519.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 553 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 448/526 (85%), Positives = 480/526 (91%), Gaps = 5/526 (0%) Query: 19 PWVAGLVLGGAGALGLHAAGAAQLLSAPGCSGVAVVLGLAGFALAQRRAQPGEGQLVDKI 78 PW+AGL++G L L A GA Q L P + V+LG+A FA ++R+QP QLVD+I Sbjct: 22 PWLAGLLVGSLAGLALDALGAGQWLPGPVIHALGVLLGMAVFAPLRQRSQPQGNQLVDRI 81 Query: 79 SGEIDHIMIGAAETSFFVDTIKTKISKDVVAADRIAASAEQNAATTEQIAANAERASAIA 138 SGEIDHIMIGAAETSFFVDTIKTK+SKDV AA+RIAASAEQNAATT+QIAANAERAS+IA Sbjct: 82 SGEIDHIMIGAAETSFFVDTIKTKLSKDVDAANRIAASAEQNAATTQQIAANAERASSIA 141 Query: 139 AEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN 198 +EVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN Sbjct: 142 SEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN 201 Query: 199 LLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGVMVRAITEEAERAATGMN 258 LLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIG MVRAITEEAERAA+GMN Sbjct: 202 LLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGTMVRAITEEAERAASGMN 261 Query: 259 SLSSRVLEAAQNVEKVHGLLNSIERSSSQSQEQIEEIAVASREHVQTTQEIAEAITDIRN 318 SLSSRVLEAAQNVEKVHGLLNSIERS+SQSQEQIEEIAVASREHVQTTQEIA+AITDIRN Sbjct: 262 SLSSRVLEAAQNVEKVHGLLNSIERSASQSQEQIEEIAVASREHVQTTQEIADAITDIRN 321 Query: 319 GMLQTDHELPRVAASAMVLSERAEAVFEAIIDGGARGGHDDIRVAATGAAQAVGKLFETA 378 GMLQTD ELPRVAASAM LSERAEAVFEAI++GGARGGHDDIR+AA AA AVGKLFE + Sbjct: 322 GMLQTDTELPRVAASAMQLSERAEAVFEAIVEGGARGGHDDIRIAAADAAAAVGKLFEES 381 Query: 379 IRSGQISEAALFDRTYKPIPNTSPQKHSSQFDGFTDRVLPAIQEALLASMPQLAYAGAVD 438 IR+G I+EAALFDR YKPIPNTSPQKHSSQFD FTDRVLPAIQEALL MPQLAYAGAVD Sbjct: 382 IRAGVITEAALFDRHYKPIPNTSPQKHSSQFDAFTDRVLPAIQEALLERMPQLAYAGAVD 441 Query: 439 NNGYFPTHNKKFSQPLTGDYDTDLVNNRTKRIFSDRTGKRCGANTRPFLLQTYKRDTGEV 498 NNGYFPTHNKKFSQPLTG+YD DLVNNRTKRIFSDRTGKRCG+NT+PFLLQTYKRDTGEV Sbjct: 442 NNGYFPTHNKKFSQPLTGNYDVDLVNNRTKRIFSDRTGKRCGSNTKPFLLQTYKRDTGEV 501 Query: 499 MHDLSVPIYVNGKHWGGFRVGYRSSHAPASGDA-----VPAKKRLS 539 MHDLSVPI+V+GKHWGGFRVGYRSSHAPA A VP+ ++S Sbjct: 502 MHDLSVPIHVHGKHWGGFRVGYRSSHAPAPAVATTPAPVPSPAKVS 547 >emb|CAM32673.2| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae] Length = 553 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 444/526 (84%), Positives = 476/526 (90%), Gaps = 5/526 (0%) Query: 19 PWVAGLVLGGAGALGLHAAGAAQLLSAPGCSGVAVVLGLAGFALAQRRAQPGEGQLVDKI 78 PW+AGL++G L L A GA Q L P + V+LG+A FA ++R+QP QLVD+I Sbjct: 22 PWLAGLLVGSLAGLALDALGAGQWLPGPVIHALGVLLGMAVFAPLRQRSQPQGNQLVDRI 81 Query: 79 SGEIDHIMIGAAETSFFVDTIKTKISKDVVAADRIAASAEQNAATTEQIAANAERASAIA 138 SGEIDHIMIGAAETSFFVDTIKTK+SKDV AA+RIAASAEQNAATT+QIAANAERAS+IA Sbjct: 82 SGEIDHIMIGAAETSFFVDTIKTKLSKDVDAANRIAASAEQNAATTQQIAANAERASSIA 141 Query: 139 AEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN 198 +EVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN Sbjct: 142 SEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEIAARTN 201 Query: 199 LLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGVMVRAITEEAERAATGMN 258 LLALNAAIEAARAGEQGRG VVAGEVRQLAQRTKEATDDIG MVRAITEEAERA +GMN Sbjct: 202 LLALNAAIEAARAGEQGRGLGVVAGEVRQLAQRTKEATDDIGTMVRAITEEAERADSGMN 261 Query: 259 SLSSRVLEAAQNVEKVHGLLNSIERSSSQSQEQIEEIAVASREHVQTTQEIAEAITDIRN 318 SLSSRVLEA QNVEKVHGLLNSIERS+SQSQEQIEEIAVASREHVQTTQEIA+AITDIRN Sbjct: 262 SLSSRVLEAGQNVEKVHGLLNSIERSASQSQEQIEEIAVASREHVQTTQEIADAITDIRN 321 Query: 319 GMLQTDHELPRVAASAMVLSERAEAVFEAIIDGGARGGHDDIRVAATGAAQAVGKLFETA 378 GMLQTD ELPRVAASAM LSERAEAVFEAI++GGARGGHDDIR+AA AA AVGKLFE + Sbjct: 322 GMLQTDTELPRVAASAMQLSERAEAVFEAIVEGGARGGHDDIRIAAADAAAAVGKLFEES 381 Query: 379 IRSGQISEAALFDRTYKPIPNTSPQKHSSQFDGFTDRVLPAIQEALLASMPQLAYAGAVD 438 IR+G I+EAALFDR YKPIPNTSPQKHSSQFD FTDRVLPAIQEALL MPQLAYAGAVD Sbjct: 382 IRAGVITEAALFDRHYKPIPNTSPQKHSSQFDAFTDRVLPAIQEALLERMPQLAYAGAVD 441 Query: 439 NNGYFPTHNKKFSQPLTGDYDTDLVNNRTKRIFSDRTGKRCGANTRPFLLQTYKRDTGEV 498 NNGYFPTHNKKFSQPLTG+YD DLVNNRTKRIFSDRTGKRCG+NT+PFLLQTYKRDTGEV Sbjct: 442 NNGYFPTHNKKFSQPLTGNYDVDLVNNRTKRIFSDRTGKRCGSNTKPFLLQTYKRDTGEV 501 Query: 499 MHDLSVPIYVNGKHWGGFRVGYRSSHAPASGDA-----VPAKKRLS 539 MHDLSVPI+V+GKHWGGFRVGYRSSHAPA A VP+ ++S Sbjct: 502 MHDLSVPIHVHGKHWGGFRVGYRSSHAPAPAVATTPAPVPSPAKVS 547 >ref|YP_001353185.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR88572.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 560 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 344/458 (75%), Positives = 399/458 (87%) Query: 74 LVDKISGEIDHIMIGAAETSFFVDTIKTKISKDVVAADRIAASAEQNAATTEQIAANAER 133 V+KI GEIDHIMIGAAETS+FVD+IK KI++DV AA+ I +EQNA+TTEQIAANAER Sbjct: 69 FVNKIGGEIDHIMIGAAETSYFVDSIKNKIAQDVQAANGIVTGSEQNASTTEQIAANAER 128 Query: 134 ASAIAAEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISEI 193 AS+IAAEVR ESV+GR+EV+ GL+QIG+AR DA +AS MM LQEKSRRIHGITEVISEI Sbjct: 129 ASSIAAEVRAESVAGRNEVNLGLEQIGKARDDAQTASEMMRVLQEKSRRIHGITEVISEI 188 Query: 194 AARTNLLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGVMVRAITEEAERA 253 AARTNLLALNAAIEAARAGE GRGFAVVAGEVRQLAQRTKEATDDIG MV AI EAERA Sbjct: 189 AARTNLLALNAAIEAARAGEHGRGFAVVAGEVRQLAQRTKEATDDIGAMVTAINVEAERA 248 Query: 254 ATGMNSLSSRVLEAAQNVEKVHGLLNSIERSSSQSQEQIEEIAVASREHVQTTQEIAEAI 313 A GM++LSS+V+EA+QNVE+VH L++IER++ S+E+I++IA ASREHV+TT +IA AI Sbjct: 249 AGGMHALSSKVMEASQNVERVHEFLSNIERAAGTSEEEIQQIAHASREHVETTHKIAAAI 308 Query: 314 TDIRNGMLQTDHELPRVAASAMVLSERAEAVFEAIIDGGARGGHDDIRVAATGAAQAVGK 373 IR+GML TD ELPRVAASAM LSERAE V++AI + GA HD+IR+ A+ AA +GK Sbjct: 309 LKIRDGMLATDTELPRVAASAMALSERAETVYDAIAESGAATQHDEIRMVASTAALRIGK 368 Query: 374 LFETAIRSGQISEAALFDRTYKPIPNTSPQKHSSQFDGFTDRVLPAIQEALLASMPQLAY 433 +FE AI +G+IS ALFDR Y+P+PNTSP KH++QFD FTDRVLP IQEA+L +MPQLAY Sbjct: 369 VFEEAIANGRISRDALFDRNYRPVPNTSPAKHTTQFDAFTDRVLPEIQEAILDTMPQLAY 428 Query: 434 AGAVDNNGYFPTHNKKFSQPLTGDYDTDLVNNRTKRIFSDRTGKRCGANTRPFLLQTYKR 493 AGAVD+NGYFPTHNKKFS+PLTGDYD DLVNNRTKRIF+DRTGKRCG+NT+ FLLQTYKR Sbjct: 429 AGAVDDNGYFPTHNKKFSKPLTGDYDVDLVNNRTKRIFTDRTGKRCGSNTKAFLLQTYKR 488 Query: 494 DTGEVMHDLSVPIYVNGKHWGGFRVGYRSSHAPASGDA 531 DTGEVMHDLSVPIYVNGKHWGGFR+GYRSS A + A Sbjct: 489 DTGEVMHDLSVPIYVNGKHWGGFRIGYRSSSAEQAAPA 526 >ref|YP_001100073.1| putative methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL61948.1| Putative chemotaxis sensory transducer precursor [Herminiimonas arsenicoxydans] Length = 550 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 340/451 (75%), Positives = 396/451 (87%) Query: 73 QLVDKISGEIDHIMIGAAETSFFVDTIKTKISKDVVAADRIAASAEQNAATTEQIAANAE 132 ++KI EIDHIMIGAAETSFFVD+IK KI++DV AA+ I A +EQNA+TTEQIAANAE Sbjct: 70 HFINKIGSEIDHIMIGAAETSFFVDSIKNKIAQDVQAANGIVAGSEQNASTTEQIAANAE 129 Query: 133 RASAIAAEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVISE 192 RAS +AAEVRTESV+GR+EV+RGL+QIG+AR DA +AS MM LQEKSRRIHGITEVISE Sbjct: 130 RASQVAAEVRTESVAGRAEVNRGLEQIGKARDDAQAASEMMRVLQEKSRRIHGITEVISE 189 Query: 193 IAARTNLLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGVMVRAITEEAER 252 IAARTNLLALNAAIEAARAGE GRGFAVVAGEVRQLAQRTKEATDDIG MVRAI EAER Sbjct: 190 IAARTNLLALNAAIEAARAGEHGRGFAVVAGEVRQLAQRTKEATDDIGSMVRAINVEAER 249 Query: 253 AATGMNSLSSRVLEAAQNVEKVHGLLNSIERSSSQSQEQIEEIAVASREHVQTTQEIAEA 312 AA GM +LS +V+EA+QNV +VH L +IER++S S+E+I++IA ASREHV+TT IA A Sbjct: 250 AAGGMQALSGKVMEASQNVARVHEFLGNIERAASTSEEEIQQIARASREHVETTHRIAAA 309 Query: 313 ITDIRNGMLQTDHELPRVAASAMVLSERAEAVFEAIIDGGARGGHDDIRVAATGAAQAVG 372 I +IR+GML+TD ELPRVAASAMVLSERAE V++AI + GA HD IR+ AT AA +G Sbjct: 310 ILEIRDGMLETDTELPRVAASAMVLSERAEVVYDAIAESGADTQHDSIRMIATEAAHQIG 369 Query: 373 KLFETAIRSGQISEAALFDRTYKPIPNTSPQKHSSQFDGFTDRVLPAIQEALLASMPQLA 432 ++F+ AI +G+I+ ALFDR Y+P+PNTSP KH++QFD FTDRVLP +QEA+L +MPQLA Sbjct: 370 RIFDEAIVAGRITREALFDRHYQPLPNTSPPKHTTQFDAFTDRVLPTVQEAILDAMPQLA 429 Query: 433 YAGAVDNNGYFPTHNKKFSQPLTGDYDTDLVNNRTKRIFSDRTGKRCGANTRPFLLQTYK 492 YAGAVD+NGYFPTHNKKFSQ LTG+YD DLVNNRTKRIF+DRTGKRCG+NT+PFLLQTYK Sbjct: 430 YAGAVDDNGYFPTHNKKFSQALTGNYDVDLVNNRTKRIFTDRTGKRCGSNTKPFLLQTYK 489 Query: 493 RDTGEVMHDLSVPIYVNGKHWGGFRVGYRSS 523 RDTGEVMHDLSVPIYV+GKHWGGFR+GYRSS Sbjct: 490 RDTGEVMHDLSVPIYVDGKHWGGFRIGYRSS 520 >ref|ZP_08274886.1| methyl-accepting chemotaxis sensory transducer [Oxalobacteraceae bacterium IMCC9480] gb|EGF31637.1| methyl-accepting chemotaxis sensory transducer [Oxalobacteraceae bacterium IMCC9480] Length = 518 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 284/453 (62%), Positives = 345/453 (76%) Query: 72 GQLVDKISGEIDHIMIGAAETSFFVDTIKTKISKDVVAADRIAASAEQNAATTEQIAANA 131 G ++ EIDHIMIGAAE +FF+++IK KI DV + D IA SA Q+A+ TEQIAANA Sbjct: 64 GIFTQRVGDEIDHIMIGAAEAAFFIESIKKKIDADVASTDAIAVSAGQSASATEQIAANA 123 Query: 132 ERASAIAAEVRTESVSGRSEVDRGLQQIGQARTDALSASSMMAQLQEKSRRIHGITEVIS 191 ERA +A EV ESV R+ ++ L +I +A DAL+AS +MA LQ+KS +I ITEVI+ Sbjct: 124 ERAFQVAGEVHGESVLARAATEKVLLEIHRAENDALAASELMAILQKKSSQISTITEVIN 183 Query: 192 EIAARTNLLALNAAIEAARAGEQGRGFAVVAGEVRQLAQRTKEATDDIGVMVRAITEEAE 251 +IAA+TNLLALNAAIEAARAGE GRGFAVVAGEVRQLAQRT AT +IG MVR I ++A Sbjct: 184 QIAAQTNLLALNAAIEAARAGEHGRGFAVVAGEVRQLAQRTHLATGEIGTMVREINQQAL 243 Query: 252 RAATGMNSLSSRVLEAAQNVEKVHGLLNSIERSSSQSQEQIEEIAVASREHVQTTQEIAE 311 AA GM +L+ RV AA V V+ L +IER+++ ++E++ +IA ASRE V T++E++ Sbjct: 244 LAANGMTALNRRVSGAASEVGVVNLSLVNIERAATTAEEEVRQIAAASREQVGTSREVSS 303 Query: 312 AITDIRNGMLQTDHELPRVAASAMVLSERAEAVFEAIIDGGARGGHDDIRVAATGAAQAV 371 AI DIR+ M+ T+ +LP AA+AM LSER EA+F+A+ A HD IR AA AA + Sbjct: 304 AIADIRDSMMATETDLPAAAAAAMRLSERGEAIFDALSQSQAVTQHDAIREAARLAAGQI 363 Query: 372 GKLFETAIRSGQISEAALFDRTYKPIPNTSPQKHSSQFDGFTDRVLPAIQEALLASMPQL 431 G L + A+ GQI+ ALFDR Y I T+P KHSS FD +TDR PA+QEALL +MPQL Sbjct: 364 GALMDNAVAQGQITREALFDRRYVAIARTNPPKHSSAFDTYTDRAFPALQEALLQAMPQL 423 Query: 432 AYAGAVDNNGYFPTHNKKFSQPLTGDYDTDLVNNRTKRIFSDRTGKRCGANTRPFLLQTY 491 AYAGAVD NGYFPTHNKKFSQPLTGDYD DLVNNRTKRIF+DRTGKRCGA+T FLLQTY Sbjct: 424 AYAGAVDTNGYFPTHNKKFSQPLTGDYDIDLVNNRTKRIFTDRTGKRCGASTSAFLLQTY 483 Query: 492 KRDTGEVMHDLSVPIYVNGKHWGGFRVGYRSSH 524 KRDTGEVMHDLSVPI V GKHWGGFR+GYRS+ Sbjct: 484 KRDTGEVMHDLSVPILVGGKHWGGFRIGYRSAQ 516