BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1350.p (348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCD13128.1| unnamed protein product [Trypanosoma congolense ... 276 3e-72 ref|YP_004536002.1| cation efflux protein [Novosphingobium sp. P... 272 6e-71 ref|YP_349202.1| cation efflux protein [Pseudomonas fluorescens ... 266 3e-69 ref|YP_234594.1| cation efflux protein [Pseudomonas syringae pv.... 260 2e-67 ref|YP_004087616.1| cation diffusion facilitator family transpor... 260 2e-67 >emb|CCD13128.1| unnamed protein product [Trypanosoma congolense IL3000] Length = 321 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 167/265 (63%), Positives = 197/265 (74%), Gaps = 24/265 (9%) Query: 33 YRHEHMYLGANHDRNTRRTLWVVALTAVMMVAEIAAGYFTGSMALLADGFHMATHTGALA 92 Y H+HM+LG +H+ N +RTLWVVALT VMMVAEI AGY TGSMALLADGFHMATH GAL Sbjct: 8 YSHDHMFLGKSHEENAKRTLWVVALTVVMMVAEITAGYLTGSMALLADGFHMATHAGALG 67 Query: 93 IAAGAYVFARRHAHDGRFSFGTGKVGDLAGFASALVLAVIAIGIGGESVWRLASPSTVDF 152 IAA AY +A+RHA + R+SFGTGKVGDL GFASAL+L ++++GI GES++RL P+ V F Sbjct: 68 IAAAAYGYAKRHASNARYSFGTGKVGDLGGFASALILGLVSLGIAGESLFRLFQPTQVQF 127 Query: 153 GEAIPIAIVGLIVNIASALLLMEGHHGHDHGHGHAHAHDAGHAHHGHEAHGHAHQEHHDH 212 G A IAIVGL VN+ SALLL + + HGH H + H Sbjct: 128 GTATLIAIVGLAVNVVSALLL---------------------SGGHNHHHGHDHGQDESH 166 Query: 213 HGHHHDGHDNNLRSAYLHVVADALTSVLAIAALLAGLYLGWTWLDPLMGVVGAVVIARWS 272 H H GHDNNLRSAY+HV+ADALTSVLAIAALLAG YLGW WLDP MG+VGAVVIARW+ Sbjct: 167 HAH---GHDNNLRSAYIHVIADALTSVLAIAALLAGRYLGWVWLDPAMGIVGAVVIARWA 223 Query: 273 YSLLRASATVLLDVTDEQVATRIRE 297 +SL+R +A+VLLD TD+ VA IRE Sbjct: 224 WSLMRVTASVLLDQTDDHVAEEIRE 248 >ref|YP_004536002.1| cation efflux protein [Novosphingobium sp. PP1Y] emb|CCA94184.1| cation efflux protein [Novosphingobium sp. PP1Y] Length = 325 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 170/263 (64%), Positives = 195/263 (74%), Gaps = 8/263 (3%) Query: 35 HEHMYLGANHDRNTRRTLWVVALTAVMMVAEIAAGYFTGSMALLADGFHMATHTGALAIA 94 H+H +LGA+HD N RRTLWVVALTAVMMV EI AGY TGSMALLADGFHMATH GAL++A Sbjct: 12 HDHDFLGASHDANARRTLWVVALTAVMMVGEIVAGYLTGSMALLADGFHMATHAGALSVA 71 Query: 95 AGAYVFARRHAHDGRFSFGTGKVGDLAGFASALVLAVIAIGIGGESVWRLASPSTVDFGE 154 A AY +A+RH + FSFGTGKVGDLAGFASALVLA+ A+GIG ES RL SP V FGE Sbjct: 72 AMAYAYAKRHKRNPAFSFGTGKVGDLAGFASALVLAMFALGIGFESFMRLLSPVRVAFGE 131 Query: 155 AIPIAIVGLIVNIASALLLMEGHHGHDHGHGHAHAHDAGHAHHGHEAHGHAHQEHHDHHG 214 A IAI+GL VN+ SALLL GH H HHGH H H Sbjct: 132 ATVIAIIGLAVNVVSALLL--------SGHHHHGHDHHHGHHHGHHHGHDHDHGHRQGHH 183 Query: 215 HHHDGHDNNLRSAYLHVVADALTSVLAIAALLAGLYLGWTWLDPLMGVVGAVVIARWSYS 274 H H DNNLRSAY+HV+ADALTSVLAIAALL+G YLGW WLDP+MG+VGA+VIARWS++ Sbjct: 184 HGHGHGDNNLRSAYMHVLADALTSVLAIAALLSGRYLGWVWLDPVMGLVGALVIARWSWT 243 Query: 275 LLRASATVLLDVTDEQVATRIRE 297 L+R +A+VLLD TD+ VA +RE Sbjct: 244 LMRDTASVLLDRTDDHVAAEVRE 266 >ref|YP_349202.1| cation efflux protein [Pseudomonas fluorescens Pf0-1] gb|ABA75211.1| cobalt-zinc-cadmium resistance protein [Pseudomonas fluorescens Pf0-1] Length = 315 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 171/270 (63%), Positives = 202/270 (74%), Gaps = 22/270 (8%) Query: 33 YRHEHMYLGANHDRNTRRTLWVVALTAVMMVAEIAAGYFTGSMALLADGFHMATHTGALA 92 + H H +LGA+HD N RRTLWVV LT VMM+ EIAAGY TGSMALLADGFHMATH GAL Sbjct: 13 FSHNHQFLGASHDENARRTLWVVVLTFVMMIGEIAAGYLTGSMALLADGFHMATHAGALG 72 Query: 93 IAAGAYVFARRHAHDGRFSFGTGKVGDLAGFASALVLAVIAIGIGGESVWRLASPSTVDF 152 IAA AY FARR+A++ R+SFGTGKVGDLAGFASA+VL ++++GI GESV+RL P++V F Sbjct: 73 IAAAAYGFARRNANNRRYSFGTGKVGDLAGFASAMVLGLVSLGIAGESVFRLFQPTSVAF 132 Query: 153 GEAIPIAIVGLIVNIASALLLMEGHHGHDHGHGHAHAHDAGHAHHGHEAHGHAHQEHHDH 212 GEA IA+VGL VN+ SA LL H HDHGH H H+HD GH HH Sbjct: 133 GEATLIAVVGLGVNLLSAFLLAGHHSHHDHGHSHDHSHDHGHHHHHD------------- 179 Query: 213 HGHHHDGHDNNLRSAYLHVVADALTSVLAIAALLAGLYLGWTWLDPLMGVVGAVVIARWS 272 NNLRSAY+HV+ADALTSVLAIAALLAG YLGW W+DP+MG+VG++VIA+W+ Sbjct: 180 ---------NNLRSAYVHVLADALTSVLAIAALLAGRYLGWVWMDPVMGIVGSIVIAKWA 230 Query: 273 YSLLRASATVLLDVTDEQVATRIREGWPTS 302 ++L+R SA VLLD TDE VA IRE TS Sbjct: 231 WNLMRDSAAVLLDTTDEPVAEEIRELLETS 260 >ref|YP_234594.1| cation efflux protein [Pseudomonas syringae pv. syringae B728a] gb|AAY36556.1| Cation efflux protein [Pseudomonas syringae pv. syringae B728a] Length = 317 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 165/271 (60%), Positives = 188/271 (69%), Gaps = 25/271 (9%) Query: 27 MTSPATYRHEHMYLGANHDRNTRRTLWVVALTAVMMVAEIAAGYFTGSMALLADGFHMAT 86 M S ++ HEH+YLG+ HD N +RTLWVV LT VMMV EI AGY TGSMALLADGFHMAT Sbjct: 8 MNSNTSFTHEHVYLGSAHDENAKRTLWVVILTVVMMVGEITAGYLTGSMALLADGFHMAT 67 Query: 87 HTGALAIAAGAYVFARRHAHDGRFSFGTGKVGDLAGFASALVLAVIAIGIGGESVWRLAS 146 H GAL IAA AY +A+RHA RFSFGTGKVGDL GFASAL+L ++++GIG ES+ RL Sbjct: 68 HAGALGIAAAAYAYAKRHASSTRFSFGTGKVGDLGGFASALILGLVSLGIGVESIIRLFQ 127 Query: 147 PSTVDFGEAIPIAIVGLIVNIASALLLMEGHHGHDHGHGHAHAHDAGHAHHGHEAHGHAH 206 P+ V FG A IAIVGL VNI SALLL GH H H H Sbjct: 128 PTNVQFGTATLIAIVGLGVNIVSALLLGHGHRHDHGHGHHDHDHSPHGG----------- 176 Query: 207 QEHHDHHGHHHDGHDNNLRSAYLHVVADALTSVLAIAALLAGLYLGWTWLDPLMGVVGAV 266 DNNLRSAY+HV+ADALTSVLAIAALLAG YLGW WLDP MG+VGA+ Sbjct: 177 --------------DNNLRSAYIHVIADALTSVLAIAALLAGRYLGWVWLDPAMGIVGAI 222 Query: 267 VIARWSYSLLRASATVLLDVTDEQVATRIRE 297 VIARW++SL+ A+A VLLD TD+ VA IRE Sbjct: 223 VIARWAWSLMGATAGVLLDQTDDHVADEIRE 253 >ref|YP_004087616.1| cation diffusion facilitator family transporter [Asticcacaulis excentricus CB 48] gb|ADU13465.1| cation diffusion facilitator family transporter [Asticcacaulis excentricus CB 48] Length = 316 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 156/263 (59%), Positives = 189/263 (71%), Gaps = 8/263 (3%) Query: 35 HEHMYLGANHDRNTRRTLWVVALTAVMMVAEIAAGYFTGSMALLADGFHMATHTGALAIA 94 H+H+YL A HD NTRRTLWV+ LTAV MV EI AGY TGSMALLADGFHMATH GAL +A Sbjct: 6 HDHVYLSATHDANTRRTLWVLGLTAVTMVGEIVAGYLTGSMALLADGFHMATHAGALTVA 65 Query: 95 AGAYVFARRHAHDGRFSFGTGKVGDLAGFASALVLAVIAIGIGGESVWRLASPSTVDFGE 154 A AY++AR+HAHD R+SFGTGKVGDLAGFASALVL ++++GI ES+ RL P V F E Sbjct: 66 ALAYLYARKHAHDRRYSFGTGKVGDLAGFASALVLGMVSLGIAFESILRLFQPQAVAFTE 125 Query: 155 AIPIAIVGLIVNIASALLLMEGHHGHDHGHGHAHAHDAGHAHHGHEAHGHAHQEHHDHHG 214 A +A++GLI+N+ SALLL GH+ H H H H H H Sbjct: 126 ATIVAVIGLIINLLSALLLGHGHNHGHGHGHGHSHSHIHHHGHDHGHHHHHEHAHA---- 181 Query: 215 HHHDGHDNNLRSAYLHVVADALTSVLAIAALLAGLYLGWTWLDPLMGVVGAVVIARWSYS 274 DNNLR+AY+HV+ADALTS+LAI ALLAG + GW WLDPL+GVVGAVVIARW++S Sbjct: 182 ----SADNNLRAAYVHVLADALTSILAIVALLAGRFAGWWWLDPLIGVVGAVVIARWAWS 237 Query: 275 LLRASATVLLDVTDEQVATRIRE 297 L++ ++ VLLD +D Q+ IRE Sbjct: 238 LVKGTSGVLLDRSDAQIEAEIRE 260