BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1349.p         (70 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775425.1| Co/Zn/Cd efflux system component protein [He...   120   5e-26
emb|CCD13128.1| unnamed protein product [Trypanosoma congolense ...    57   1e-06
ref|YP_001748587.1| cation diffusion facilitator family transpor...    54   9e-06

>ref|YP_003775425.1| Co/Zn/Cd efflux system component protein [Herbaspirillum
           seropedicae SmR1]
 emb|CAM32666.1| Co/Zn/Cd efflux system component protein [Herbaspirillum
           seropedicae]
 gb|ADJ63517.1| Co/Zn/Cd efflux system component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 329

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 60/62 (96%), Positives = 61/62 (98%)

Query: 9   RGLADEPVQIDDLHVWRIGPTARAAIVSLSGPAEQEETPLRQKLAALEQLQHLSLEYRRL 68
           + LADEPVQIDDLHVWRIGPTARAAIVSLSGPAEQEETPLRQKLAALEQLQHLSLEYRRL
Sbjct: 268 QALADEPVQIDDLHVWRIGPTARAAIVSLSGPAEQEETPLRQKLAALEQLQHLSLEYRRL 327

Query: 69  PA 70
           PA
Sbjct: 328 PA 329


>emb|CCD13128.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 321

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 36/53 (67%)

Query: 18  IDDLHVWRIGPTARAAIVSLSGPAEQEETPLRQKLAALEQLQHLSLEYRRLPA 70
           I DLHVW++GP ARAAIVS+ G        +R++LA + ++ HL++EYR  P 
Sbjct: 258 IIDLHVWQVGPQARAAIVSVLGSPAVNAQNIRERLATVHEITHLTVEYRTKPG 310


>ref|YP_001748587.1| cation diffusion facilitator family transporter [Pseudomonas putida
           W619]
 gb|ACA72218.1| cation diffusion facilitator family transporter [Pseudomonas putida
           W619]
          Length = 331

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 16  VQIDDLHVWRIGPTARAAIVSLSGPAEQEETPLRQKLAALEQLQHLSLEYR 66
           +QI DLHVW++GP A AAIVS+ GP       +R  L  + ++ HL++EYR
Sbjct: 250 LQITDLHVWKVGPQAHAAIVSVHGPELLSADDVRAALTPVHEVTHLTVEYR 300