BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1343.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03513285.1| hypothetical protein Retl8_23721 [Rhizobium e... 144 2e-32 ref|YP_001978909.1| hypothetical protein RHECIAT_CH0002780 [Rhiz... 143 4e-32 ref|YP_472758.1| hypothetical protein RHE_PF00140 [Rhizobium etl... 142 5e-32 gb|EGE57437.1| hypothetical protein RHECNPAF_4310062 [Rhizobium ... 142 6e-32 ref|ZP_03521667.1| hypothetical protein RetlG_10285 [Rhizobium e... 142 7e-32 >ref|ZP_03513285.1| hypothetical protein Retl8_23721 [Rhizobium etli 8C-3] Length = 312 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 90/251 (35%), Positives = 135/251 (53%), Gaps = 21/251 (8%) Query: 71 DQLVSDSSKVPVPAPVLTDRSMVAFAFGQSNSANSIGERQQAATG-KVFNYFEGRYYKAA 129 ++L+ D SK PV P TDR+ V GQSN+AN G+R ++ G +V N F+GR + AA Sbjct: 57 ERLIGDESKTPVACPAQTDRTAVLLLLGQSNAANDGGQRHRSEYGARVVNAFDGRCFIAA 116 Query: 130 DPLLGATGRGGSLWTTLANKLISQEMADQVVLMSAGVGGSSVAQWRKGGNLNGMLEARLQ 189 PLLG+T G WT L N+LI+ D V+L GS VA+W GG+LN +L ++ Sbjct: 117 SPLLGSTDTKGEYWTLLGNELIASGQNDSVILAPLAYSGSEVARWAAGGDLNAVLVETMK 176 Query: 190 DAQKQGLNVTHFFWHQGEID-----NNNAYRDYEAGLTEIIQLTQRYFPNARFFVAQASA 244 Q G T W QGE D AYR+Y ++ +++ A +++ AS Sbjct: 177 QLQASGYRATSVLWVQGEKDLVIGTTAEAYREY---FLSMVDTLRQHGIEAPVYISIASK 233 Query: 245 FCPLPSS---------REILDSQRAVTRLKN-VYLGPNTD-LIGPEDRSDGCHLSGRGAE 293 C PS+ I+ +Q ++++ + + G N+D L+ +DR D CH+ G GAE Sbjct: 234 -CLEPSNGGFKEHIPDNPIVRAQLSLSKSGHGIREGINSDALLNGDDRYDDCHIGGTGAE 292 Query: 294 KVASEWVELIR 304 KV+ W+ L+R Sbjct: 293 KVSRAWLNLLR 303 >ref|YP_001978909.1| hypothetical protein RHECIAT_CH0002780 [Rhizobium etli CIAT 652] gb|ACE91731.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 312 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 90/251 (35%), Positives = 135/251 (53%), Gaps = 21/251 (8%) Query: 71 DQLVSDSSKVPVPAPVLTDRSMVAFAFGQSNSANSIGERQQAATG-KVFNYFEGRYYKAA 129 ++L+ D SK PV P TDR+ V GQSN+AN G+R ++ G +V N F+GR + AA Sbjct: 57 ERLIGDESKTPVACPAQTDRTAVLLLLGQSNAANDGGQRHRSDYGARVVNAFDGRCFIAA 116 Query: 130 DPLLGATGRGGSLWTTLANKLISQEMADQVVLMSAGVGGSSVAQWRKGGNLNGMLEARLQ 189 PLLG+T G WT L N+LI+ D V+L GS VA+W GG+LN +L ++ Sbjct: 117 SPLLGSTDTKGEYWTLLGNELIASGQNDSVILAPLAYSGSEVARWAAGGDLNAVLVETMK 176 Query: 190 DAQKQGLNVTHFFWHQGEID-----NNNAYRDYEAGLTEIIQLTQRYFPNARFFVAQASA 244 Q G T W QGE D AYR+Y ++ +++ A +++ AS Sbjct: 177 QLQASGYRATSVLWVQGEKDLVIGTTAEAYREY---FLSMVDTLRQHGIEAPVYISIASK 233 Query: 245 FCPLPSS---------REILDSQRAVTRLKN-VYLGPNTD-LIGPEDRSDGCHLSGRGAE 293 C PS+ I+ +Q ++++ + + G N+D L+ +DR D CH+ G GAE Sbjct: 234 -CLEPSNGGFKEHIPDNPIVRAQLSLSKSGHGIRQGINSDALLNGDDRYDDCHIGGTGAE 292 Query: 294 KVASEWVELIR 304 KV+ W+ L+R Sbjct: 293 KVSRAWLNLLR 303 >ref|YP_472758.1| hypothetical protein RHE_PF00140 [Rhizobium etli CFN 42] gb|ABC94031.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 312 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 89/248 (35%), Positives = 133/248 (53%), Gaps = 15/248 (6%) Query: 71 DQLVSDSSKVPVPAPVLTDRSMVAFAFGQSNSANSIGERQQAATG-KVFNYFEGRYYKAA 129 ++L++D SK V P TDR+ V GQSN+AN G+R Q+ G ++ N F+ R + AA Sbjct: 57 ERLIADESKTAVTCPTQTDRTAVLLILGQSNAANYGGQRHQSDYGARIVNAFDKRCFIAA 116 Query: 130 DPLLGATGRGGSLWTTLANKLISQEMADQVVLMSAGVGGSSVAQWRKGGNLNGMLEARLQ 189 PLLG+T G WT LANKLI D V+L GGS VA+W GG+LN +L ++ Sbjct: 117 SPLLGSTNTKGEYWTLLANKLIGSGQNDSVILAPLAYGGSEVARWAAGGDLNPVLVDTMK 176 Query: 190 DAQKQGLNVTHFFWHQGEID--NNNAYRDYEAGLTEIIQLTQRYFPNARFFVAQASAFCP 247 Q G +T W QGE D Y+ ++ +++ A +++ AS C Sbjct: 177 QLQDSGYRITSVLWVQGEADLVMGTTSEAYQKHFMSMVDTLRQHGVEAPVYISIASK-CL 235 Query: 248 LPSS---------REILDSQRAVTRLKN-VYLGPNTD-LIGPEDRSDGCHLSGRGAEKVA 296 PS+ I+ +Q A+++ + + G N+D L+ +DR D CH+ G GAEKV+ Sbjct: 236 EPSNGGFKEHIPDNAIVRAQLALSKSGHGIREGVNSDALLDGDDRYDDCHIGGSGAEKVS 295 Query: 297 SEWVELIR 304 W+ L+R Sbjct: 296 QAWLNLLR 303 >gb|EGE57437.1| hypothetical protein RHECNPAF_4310062 [Rhizobium etli CNPAF512] Length = 312 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 89/251 (35%), Positives = 135/251 (53%), Gaps = 21/251 (8%) Query: 71 DQLVSDSSKVPVPAPVLTDRSMVAFAFGQSNSANSIGERQQAATG-KVFNYFEGRYYKAA 129 ++L+ D SK PV P TDR+ V GQSN+AN G+R ++ G +V N F+GR + AA Sbjct: 57 ERLIGDESKTPVACPAQTDRTAVLLLLGQSNAANDGGQRHRSEYGARVVNAFDGRCFIAA 116 Query: 130 DPLLGATGRGGSLWTTLANKLISQEMADQVVLMSAGVGGSSVAQWRKGGNLNGMLEARLQ 189 PLLG+T G WT L N+LI+ D V+L GS VA+W GG+LN +L ++ Sbjct: 117 SPLLGSTDIKGEYWTLLGNELIASGQYDSVILAPLAYSGSEVARWAAGGDLNAVLVETMK 176 Query: 190 DAQKQGLNVTHFFWHQGEID-----NNNAYRDYEAGLTEIIQLTQRYFPNARFFVAQASA 244 Q G T W QGE D AYR+Y ++ +++ A +++ AS Sbjct: 177 KLQASGYRATSVLWVQGEKDLVIGTTAEAYREY---FLSMVDTLRQHGIEAPVYISIASK 233 Query: 245 FCPLPSS---------REILDSQRAVTRLKN-VYLGPNTD-LIGPEDRSDGCHLSGRGAE 293 C PS+ ++ +Q ++++ + + G N+D L+ +DR D CH+ G GAE Sbjct: 234 -CLEPSNGGFKEHIPDNPVVRAQLSLSKSGHGIREGINSDALLNGDDRYDDCHIGGTGAE 292 Query: 294 KVASEWVELIR 304 KV+ W+ L+R Sbjct: 293 KVSRAWLNLLR 303 >ref|ZP_03521667.1| hypothetical protein RetlG_10285 [Rhizobium etli GR56] Length = 264 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 90/247 (36%), Positives = 132/247 (53%), Gaps = 15/247 (6%) Query: 71 DQLVSDSSKVPVPAPVLTDRSMVAFAFGQSNSANSIGERQQAATG-KVFNYFEGRYYKAA 129 ++L+ D SK PV P T+R+ V GQSN+AN G+R ++ G +V N F+ R + AA Sbjct: 9 ERLIGDESKTPVTCPTQTERTAVLLLLGQSNAANDGGQRHRSNYGDRVVNAFDKRCFIAA 68 Query: 130 DPLLGATGRGGSLWTTLANKLISQEMADQVVLMSAGVGGSSVAQWRKGGNLNGMLEARLQ 189 PLLGAT G WT L N LI+ D V+L GS VA+W GG+LN +L ++ Sbjct: 69 SPLLGATDTKGEYWTLLGNHLIASGQNDNVILAPLAYSGSEVARWAAGGDLNPVLVDTMK 128 Query: 190 DAQKQGLNVTHFFWHQGEID--NNNAYRDYEAGLTEIIQLTQRYFPNARFFVAQASAFCP 247 Q G +T W QGE D DY+A ++ +++ A +++ AS C Sbjct: 129 RLQDSGYRITSVLWVQGEADLVLGTTAGDYQARFLSMVDTLRQHGVEAPVYISIASK-CL 187 Query: 248 LPSS---------REILDSQRAVTRLKN-VYLGPNTD-LIGPEDRSDGCHLSGRGAEKVA 296 PS+ I+ +Q A+++ + + G NTD L+ +DR D CH+ G GAEKVA Sbjct: 188 EPSNGGVKEHIPDNAIVRAQLALSKSGHGIREGVNTDALLDGDDRYDDCHIGGSGAEKVA 247 Query: 297 SEWVELI 303 W+ L+ Sbjct: 248 RAWLNLL 254