BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1332.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA83791.1| conserved exported hypothetical protein [blood d...    65   4e-09
emb|CCA79426.1| exported hypothetical protein [blood disease bac...    61   7e-08

>emb|CCA83791.1| conserved exported hypothetical protein [blood disease bacterium
           R229]
          Length = 104

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 5/106 (4%)

Query: 7   QVPRTRSIFDTTINVQTLCAALIGAAIAVIVGWFQLVGEVRELKIEVRNNKIEGDARATR 66
           QV R R I DT INVQ+L +A IGAA+    GWF LVG V+ L+        E +   T 
Sbjct: 4   QVTRPRWI-DTKINVQSLVSAAIGAAVMATAGWFALVGRVQALE----QTDKEHERHFTN 58

Query: 67  IEQSQQQDRADNKEQWRLANEKLDKIRDMMIQNSTGARPEIKRWMK 112
           IE S +Q R D  ++       +  IR  ++ N+ GARP+ KRW K
Sbjct: 59  IETSIRQQRDDTTQKLNDIGGDVKDIRRYLMDNAAGARPDFKRWTK 104


>emb|CCA79426.1| exported hypothetical protein [blood disease bacterium R229]
          Length = 104

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 16  DTTINVQTLCAALIGAAIAVIVGWFQLVGEVRELKIEVRNNKIEGDARATRIEQSQQQDR 75
           DT +NVQ++ +ALIGAA+    GWF LVG V+ L+   R    E +     IE + +Q R
Sbjct: 12  DTKVNVQSVLSALIGAAVMATAGWFALVGRVQALEQTDR----EHERHFVAIEANIRQQR 67

Query: 76  ADNKEQWRLANEKLDKIRDMMIQNSTGARPEIKRWMK 112
            D  ++       +  IR  ++ N+ GARP+ KRW K
Sbjct: 68  DDTTQKLNDIGGDVKDIRRYLMDNAAGARPDFKRWTK 104