BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1326.p (148 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_557983.1| putative bacteriophage protein GP46, Mu-like [B... 157 4e-37 ref|YP_001858096.1| GP46 family protein [Burkholderia phymatum S... 152 1e-35 ref|ZP_06898879.1| phage protein GP46 [Roseomonas cervicalis ATC... 104 4e-21 ref|YP_002293847.1| hypothetical protein ECSE_2572 [Escherichia ... 102 2e-20 ref|NP_050650.1| hypothetical protein Mup46 [Enterobacteria phag... 100 8e-20 >ref|YP_557983.1| putative bacteriophage protein GP46, Mu-like [Burkholderia xenovorans LB400] gb|ABE29931.1| Putative bacteriophage protein GP46, Mu-like protein [Burkholderia xenovorans LB400] Length = 149 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 81/134 (60%), Positives = 98/134 (73%) Query: 1 MADIAVYWDADGSRGDWKVIGSGLVTGSPIITQILISAFTDRVAAPDDEIPDGTTNPRGW 60 M DI++ WD D SRGDW+++G L+TG+ + + LIS F+DR+A PDD IPDGT +PRGW Sbjct: 1 MPDISLVWDVDNSRGDWQLVGPVLLTGNDLASAALISLFSDRIANPDDVIPDGTDDPRGW 60 Query: 61 WGDTGEDHPIGSRLWLLRRAKQTDETLQRAYDYLAEAFQWMIDDKVVLRFDIAVQWVRRG 120 WGD GED PIGSRLWLL RAKQT ETL A DY EA QW IDD VV R D+ QWVR Sbjct: 61 WGDLGEDQPIGSRLWLLSRAKQTQETLNNAVDYSREALQWFIDDGVVARIDVFAQWVRTS 120 Query: 121 FLGSKIVAYLPDGS 134 FLG +++ Y DG+ Sbjct: 121 FLGLQVIFYNQDGT 134 >ref|YP_001858096.1| GP46 family protein [Burkholderia phymatum STM815] gb|ACC71050.1| GP46 family protein [Burkholderia phymatum STM815] Length = 405 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 77/123 (62%), Positives = 90/123 (73%) Query: 20 IGSGLVTGSPIITQILISAFTDRVAAPDDEIPDGTTNPRGWWGDTGEDHPIGSRLWLLRR 79 IG + TG+ + T ILIS FTDR+AAPDD IPDGT +PRGWWGD GE IGSRLWLL R Sbjct: 277 IGGDVETGNDLETAILISLFTDRIAAPDDVIPDGTNDPRGWWGDAGETVNIGSRLWLLTR 336 Query: 80 AKQTDETLQRAYDYLAEAFQWMIDDKVVLRFDIAVQWVRRGFLGSKIVAYLPDGSAVQQE 139 AKQT ETLQRAYDY+ EA QWMIDD VV +FD+ V+W + LG+++VAY DGS Sbjct: 337 AKQTQETLQRAYDYIVEALQWMIDDGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATA 396 Query: 140 LGW 142 W Sbjct: 397 YTW 399 >ref|ZP_06898879.1| phage protein GP46 [Roseomonas cervicalis ATCC 49957] gb|EFH09381.1| phage protein GP46 [Roseomonas cervicalis ATCC 49957] Length = 145 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 3/127 (2%) Query: 1 MADIAVYWDADGSRGDWKVIGSGLVTGSP-IITQILISAFTDRVAAPDDEIPDGTTNPRG 59 M+DIA+ WD + + DW+++ G + +P I T +L+S FTD A PDD +P G T+PRG Sbjct: 1 MSDIAIAWDVERTAADWQILPGGQLAMAPGIHTAVLVSLFTDARARPDDRLPLGDTDPRG 60 Query: 60 WWGDTGEDHPIGSRLWLLRRAKQTDETLQRAYDYLAEAFQWMIDDKVVLRFDIAVQWVRR 119 WWGD D PIGSRLWLLRR +T +TL+ A Y+AEA W+ +D + IA +W R Sbjct: 61 WWGDG--DEPIGSRLWLLRRHARTRDTLRLAESYMAEALAWLKEDGLADAIAIAAEWQTR 118 Query: 120 GFLGSKI 126 L ++I Sbjct: 119 DRLAARI 125 >ref|YP_002293847.1| hypothetical protein ECSE_2572 [Escherichia coli SE11] dbj|BAG78096.1| hypothetical phage protein [Escherichia coli SE11] Length = 145 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 59/140 (42%), Positives = 79/140 (56%), Gaps = 2/140 (1%) Query: 1 MADIAVYWDADGSRGDWKVIGSGLVTGSPIITQILISAFTDRVAAPDDEIPDGTTNPRGW 60 M D+A+ W RGD G ++T + T + IS FTDR A D +PDG+ N RGW Sbjct: 1 MTDLAIIWT--NGRGDIAQDGIDMLTDDSLTTDVTISLFTDRRALDSDTLPDGSDNRRGW 58 Query: 61 WGDTGEDHPIGSRLWLLRRAKQTDETLQRAYDYLAEAFQWMIDDKVVLRFDIAVQWVRRG 120 WGD+ D PIGSRLWLL R K T +TL+RA Y EA +W+ V ++ + + +G Sbjct: 59 WGDSYRDRPIGSRLWLLSREKATPDTLERARGYAEEALEWLKTAGRVSAINVRAEQLHQG 118 Query: 121 FLGSKIVAYLPDGSAVQQEL 140 +L I LPDGS + E Sbjct: 119 WLYLYIALTLPDGSVIPYEF 138 >ref|NP_050650.1| hypothetical protein Mup46 [Enterobacteria phage Mu] ref|YP_001462164.1| phage protein GP46 [Escherichia coli E24377A] ref|YP_003335795.1| hypothetical protein [Escherichia phage D108] ref|ZP_07593193.1| GP46 family protein [Escherichia coli W] ref|ZP_08351611.1| phage protein GP46 [Escherichia coli M605] sp|Q9T1V3|VG46_BPMU RecName: Full=Protein gp46 gb|AAF01124.1|AF083977_43 gp46 [Enterobacteria phage Mu] gb|AAW58982.1| gp46 [Cloning vector MuNXKan] gb|ABV16996.1| phage protein GP46 [Escherichia coli E24377A] gb|ACV50306.1| conserved hypothetical protein [Escherichia phage D108] gb|EFN37251.1| GP46 family protein [Escherichia coli W] gb|ADT73816.1| hypothetical protein ECW_m0274 [Escherichia coli W] gb|ADX52221.1| GP46 family protein [Escherichia coli KO11FL] gb|EGI13091.1| phage protein GP46 [Escherichia coli M605] Length = 145 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 2/140 (1%) Query: 1 MADIAVYWDADGSRGDWKVIGSGLVTGSPIITQILISAFTDRVAAPDDEIPDGTTNPRGW 60 M D+A+ W RGD G ++T + T + IS FTDR A D +PDG+ + RGW Sbjct: 1 MTDLAIIWT--NGRGDIAQDGIDMLTDDSLTTDVTISLFTDRRALDSDTLPDGSDDRRGW 58 Query: 61 WGDTGEDHPIGSRLWLLRRAKQTDETLQRAYDYLAEAFQWMIDDKVVLRFDIAVQWVRRG 120 WGD+ D PIGSRLWLL R K T +TL+RA Y EA +W+ V ++ + + +G Sbjct: 59 WGDSYRDRPIGSRLWLLSREKATPDTLERARGYAEEALEWLKTAGRVSAINVRAEQLHQG 118 Query: 121 FLGSKIVAYLPDGSAVQQEL 140 +L I LPDGS + E Sbjct: 119 WLYLYIALTLPDGSVIPYEF 138