BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1296.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02461535.1| hypothetical protein Bpseu9_40689 [Burkholder... 143 4e-32 ref|YP_001578690.1| hypothetical protein Bmul_0498 [Burkholderia... 119 1e-24 ref|YP_556039.1| hypothetical protein Bxe_C0807 [Burkholderia xe... 117 3e-24 ref|ZP_05721684.1| hypothetical protein VMB_29850 [Vibrio mimicu... 94 5e-17 ref|ZP_01227221.1| hypothetical protein SI859A1_01342 [Aurantimo... 68 3e-09 >ref|ZP_02461535.1| hypothetical protein Bpseu9_40689 [Burkholderia pseudomallei 9] Length = 240 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 82/230 (35%), Positives = 125/230 (54%), Gaps = 4/230 (1%) Query: 20 VEIVRRAVSAAEDELVTALRFYEAWLPAATDVALMDRLGSSYATQTFEVIRFSLQRELLL 79 ++ +R V AA++E A+ F+EAW P A D L R+G+SYAT TF IR +L+RE+LL Sbjct: 7 IDNLRAKVKAAQEEFDMAVLFHEAWKPMAYDEGLHGRMGASYATHTFRTIRTALRREVLL 66 Query: 80 AIMRFWDKDPRAIRLTDIREKLRNKDFVSRLLDDRTLRLAMRSKGVRDRLE----EDLVP 135 A+MR WD P+++++ + E L + + L+ +R L R D+ E E + Sbjct: 67 ALMRVWDYTPKSVQIGSVIEALGEHEVIDALVTERITALKERGGVGMDKFEVVFRESVES 126 Query: 136 KFAEIVRRIGRYLQGGDLHENLEKMRAVRHERLAHRQVVESASGTPSLTKAVIEKIFFDT 195 ++ G+Y +GG L+ +R VRHE+LAHRQ S +G T IE + DT Sbjct: 127 AVKDVTALFGQYAEGGSRRAVLDGLRKVRHEQLAHRQAKPSPAGGADSTDEEIESFYQDT 186 Query: 196 IEIVQLLMSAINGKTFAAKDAGSIFRHNAKYFWMAVRGERTRGHPAYRGD 245 ++ L+S + + + A+ FW +VRGERT GHP+Y D Sbjct: 187 SALICNLLSIALAVEYDPAETARAYSRPAELFWASVRGERTEGHPSYGRD 236 >ref|YP_001578690.1| hypothetical protein Bmul_0498 [Burkholderia multivorans ATCC 17616] ref|YP_001947181.1| hypothetical protein BMULJ_02757 [Burkholderia multivorans ATCC 17616] gb|ABX14193.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] dbj|BAG44645.1| hypothetical protein BMULJ_02757 [Burkholderia multivorans ATCC 17616] Length = 243 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 127/226 (56%), Gaps = 3/226 (1%) Query: 17 DEEVEIVRRAVSAAEDELVTALRFYEAWLPAATDVALMDRLGSSYATQTFEVIRFSLQRE 76 +E + + V+AAE+E++ A+ F+E W P A D L R+G SYA TFE+IR +L+RE Sbjct: 8 EERLTRAKLLVAAAEEEMLLAIMFHETWKPTAYDGDLRARIGGSYAAHTFEIIRLALRRE 67 Query: 77 LLLAIMRFWDKDPRAIRLTDIREKLRNKDFVSRLLDDRTLRLAMRSKGVRDRLEEDLVPK 136 +++A+MR WD +A++L I + L++ + L+ +R + + + D L + Sbjct: 68 VVMALMRLWDDHRQALKLNSIVDVLQSAECFDGLMRERIAAIGVPEEEA-DALRDTHRKL 126 Query: 137 FAEIVRRIGRYLQGGDLHENLEKMRAVRHERLAHRQVVESASGTPSL-TKAVIEKIFFDT 195 ++V + ++ D L+++R +RHERLAHRQ + L T +E ++ D+ Sbjct: 127 RDDMVALVRKHTHSNDPSPLLDRLRTIRHERLAHRQAEQPTDPAGLLATDEEVEDLYQDS 186 Query: 196 IEIVQLLMSAINGKTF-AAKDAGSIFRHNAKYFWMAVRGERTRGHP 240 I+ + + G++F A +G +R +A YFW +VRGE GHP Sbjct: 187 RRIINYMALLLLGRSFYLALGSGRPYRESAGYFWESVRGEGAEGHP 232 >ref|YP_556039.1| hypothetical protein Bxe_C0807 [Burkholderia xenovorans LB400] gb|ABE36689.1| hypothetical protein Bxe_C0807 [Burkholderia xenovorans LB400] Length = 254 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 6/251 (2%) Query: 4 MRVSSVRPDEPAQDEEV-EIVRRAVSAAEDELVTALRFYEAWLPAATDVALMDRLGSSYA 62 M S RPD +V + V+AA DE A+ F+E+W P A D L R+G+S+A Sbjct: 1 MIASVPRPDTEMDSAKVIAEIEAQVNAAMDEASRAIAFHESWRPMAYDEELHMRMGNSFA 60 Query: 63 TQTFEVIRFSLQRELLLAIMRFWDKDPRAIRLTDIREKLRNKDFVSRLLDDRTLRLAMRS 122 TF VIR +L+RE+LLA++R WD +++ L E LR + L++ RT + S Sbjct: 61 AGTFVVIRQALRREMLLALLRVWDDQQKSLSLRRTFEALRIPAVLDALIEKRT-KDRTGS 119 Query: 123 KGVRDRLEEDLVPKFAEIVRRIG----RYLQGGDLHENLEKMRAVRHERLAHRQVVESAS 178 L E + + + + G +Y + G+ ++ + +R+ LAH Q+ Sbjct: 120 NAFDKILAEHIAGSCTDYIEKAGDLFDKYWKKGEASHVMQHLHVLRNTMLAHNQLAPQRV 179 Query: 179 GTPSLTKAVIEKIFFDTIEIVQLLMSAINGKTFAAKDAGSIFRHNAKYFWMAVRGERTRG 238 IE + DT IV+ L+ A++ D ++ A++FW +VRGE T G Sbjct: 180 KGKDARDDEIEAFYRDTRTIVECLLHAVHATALDMNDTQGVYETYARFFWESVRGESTPG 239 Query: 239 HPAYRGDVRAT 249 HP+YR +T Sbjct: 240 HPSYRAPFDST 250 >ref|ZP_05721684.1| hypothetical protein VMB_29850 [Vibrio mimicus VM603] gb|EEW05783.1| hypothetical protein VMB_29850 [Vibrio mimicus VM603] Length = 123 Score = 93.6 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 2/113 (1%) Query: 256 MTFQIVADDSVDRKKPLLYMWEIFDKDSGASKSRYVGKAAGGSKRPERHYKQNVRRLLAD 315 M F ++ V+ K L+YMWEI+D+ + RYVGKA G+KRP +HYK+NV RL+A Sbjct: 1 MNFDVIYQ-GVNPDKALIYMWEIYDR-TDVLVGRYVGKAKNGAKRPLKHYKRNVARLIAG 58 Query: 316 LGYRAGNPHGYRDIHHALAEATTMGDRIFLNLLRNVREDENIYQAERAAIVQY 368 YR NP+ YR +H ALA+A I L L N+ E E+I Q ++ I Q+ Sbjct: 59 QPYRKSNPNSYRVVHKALADAVDKNYVIKLYFLANINEGEDINQVDQTLINQH 111 >ref|ZP_01227221.1| hypothetical protein SI859A1_01342 [Aurantimonas manganoxydans SI85-9A1] gb|EAS49989.1| hypothetical protein SI859A1_01342 [Aurantimonas manganoxydans SI85-9A1] Length = 524 Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Query: 252 DIPEMTFQIVADDSVDRKKPLLYMWEIFDKDSGASKSRYVGKAAGGSKRPERHYKQNVRR 311 ++P+ F + D + P +Y W I S Y+G+ G+ RP R Y QNVR Sbjct: 399 ELPDPWFTLTVHDGASLELPGIYEWVIQGVGS------YIGRYTRGT-RPTRQYTQNVRN 451 Query: 312 LLADLGYRAGNPHGYRDIHHALAEATTMGDRIFLNLLRN 350 LLA GYRAGN G+R IH ALA+A G I L++L N Sbjct: 452 LLAGRGYRAGNAAGFRRIHVALADAVRAGRGIELHILEN 490