BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1289.p (125 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04601530.1| hypothetical protein GCWU000324_01002 [Kingel... 89 3e-16 ref|YP_004792009.1| hypothetical protein BurJV3_1452 [Burkholder... 68 6e-10 ref|NP_779543.1| hypothetical protein PD1345 [Xylella fastidiosa... 67 1e-09 ref|NP_298955.1| hypothetical protein XF1666 [Xylella fastidiosa... 66 1e-09 ref|YP_001829759.1| hypothetical protein XfasM23_1057 [Xylella f... 66 2e-09 >ref|ZP_04601530.1| hypothetical protein GCWU000324_01002 [Kingella oralis ATCC 51147] gb|EEP69090.1| hypothetical protein GCWU000324_01002 [Kingella oralis ATCC 51147] Length = 145 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 10/124 (8%) Query: 1 MKLVAVTLPFPDKRLNPNNANGMHWAATSGLRKKAHLEGFVLARQEARSVAWSPVKGDVP 60 MK + LP+P+ L PN +G HWA+ + KA E F+L S + + G Sbjct: 25 MKQNKIILPYPNPVLMPNRKHGRHWASVQQAKVKARQEAFLL------SGSLNYTGGG-- 76 Query: 61 LRITFELPDRRPRDRDNLLAAMKAGLDGVAEALGVDDSQFEPVLL--TRRYGRKPGAVHI 118 L+ITF PD R RD DNLLAAMK LDG+A+A+GVDD+QF P+L+ + RK V I Sbjct: 77 LKITFYTPDARKRDLDNLLAAMKPALDGMAKAIGVDDAQFRPLLIDKVKAESRKDARVEI 136 Query: 119 EIGG 122 E+ G Sbjct: 137 ELMG 140 >ref|YP_004792009.1| hypothetical protein BurJV3_1452 [Burkholderia sp. JV3] gb|AEM50783.1| hypothetical protein BurJV3_1452 [Burkholderia sp. JV3] Length = 121 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 6 VTLPFPDKRLNPNNANGMHWAATSGLRKKAHLEGFVLARQEARSVAWSPVKGDVPLRITF 65 + LP+PDKRL+PN +HW+ SG + A G + A EA W+ G + L +TF Sbjct: 4 LILPWPDKRLSPNAR--VHWSKRSGAARLARHLGAITA-LEAGCKGWTLPDGRLHLHVTF 60 Query: 66 ELPDRRPRDRDNLLAAMKAGLDGVAEALGVDDSQFEPVLLTRRYGRKPGAVHIEIGGA 123 P + D DN+LA K DG+A+ALG+DD +F L RK G V + I G Sbjct: 61 HPPTKLLPDDDNMLARFKPYRDGIADALGIDDKRFISHPLVSTEVRKGGQVVVRITGG 118 >ref|NP_779543.1| hypothetical protein PD1345 [Xylella fastidiosa Temecula1] sp|Q87BV3|Y1345_XYLFT RecName: Full=Uncharacterized protein PD_1345 gb|AAO29192.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gb|ADN62186.1| hypothetical protein XFLM_00830 [Xylella fastidiosa subsp. fastidiosa GB514] gb|ADN64002.1| hypothetical protein XFLM_10680 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 153 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 2 KLVAVTLPFPDKRLNPNNANGMHWAATSGLRKKAHLEGFVLARQEARSVAWSPVKGDVPL 61 ++ ++TLP+P K L+PN +HW S K+A V+AR+ S PV+G + L Sbjct: 17 QMQSLTLPWPSKDLSPNAR--VHWTRRSKAVKQARGYAEVMARRAGWSGLSLPVEGRLDL 74 Query: 62 RITFELPDRRPRDRDNLLAAMKAGLDGVAEALGVDDSQFEPVLLTRRYGRKPGAVHIEIG 121 I+F P R D DN+LA K DG+A+ALG+DD +F L R G V I I Sbjct: 75 WISFYPPTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIEDEVRHAGQVVITIT 134 Query: 122 G 122 G Sbjct: 135 G 135 >ref|NP_298955.1| hypothetical protein XF1666 [Xylella fastidiosa 9a5c] sp|Q9PCT9|Y1666_XYLFA RecName: Full=Uncharacterized protein XF_1666 gb|AAF84475.1|AE003992_11 hypothetical protein XF_1666 [Xylella fastidiosa 9a5c] Length = 137 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 2 KLVAVTLPFPDKRLNPNNANGMHWAATSGLRKKAHLEGFVLARQEARSVAWSPVKGDVPL 61 ++ ++TLP+P K L+PN +HW S K+A ++AR+ PV+G + L Sbjct: 17 QMQSLTLPWPSKDLSPNAR--VHWTRRSKAVKQARGYAEIMARRAGWGGLSLPVEGRLDL 74 Query: 62 RITFELPDRRPRDRDNLLAAMKAGLDGVAEALGVDDSQFEPVLLTRRYGRKPGAVHIEIG 121 I+F P RR D DN+LA K DG+A+ALG+DD +F L R G V + I Sbjct: 75 WISFYPPTRRLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLVEDDRRTGGEVVVRIT 134 Query: 122 G 122 G Sbjct: 135 G 135 >ref|YP_001829759.1| hypothetical protein XfasM23_1057 [Xylella fastidiosa M23] ref|YP_001830116.1| hypothetical protein XfasM23_1429 [Xylella fastidiosa M23] gb|ACB92485.1| conserved hypothetical protein [Xylella fastidiosa M23] gb|ACB92842.1| conserved hypothetical protein [Xylella fastidiosa M23] gb|EGO81160.1| hypothetical protein XFEB_02002 [Xylella fastidiosa EB92.1] Length = 136 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 2/118 (1%) Query: 5 AVTLPFPDKRLNPNNANGMHWAATSGLRKKAHLEGFVLARQEARSVAWSPVKGDVPLRIT 64 ++TLP+P K L+PN +HW S K+A V+AR+ S PV+G + L I+ Sbjct: 3 SLTLPWPSKDLSPNAR--VHWTRRSKAVKQARGYAEVMARRAGWSGLSLPVEGRLDLWIS 60 Query: 65 FELPDRRPRDRDNLLAAMKAGLDGVAEALGVDDSQFEPVLLTRRYGRKPGAVHIEIGG 122 F P R D DN+LA K DG+A+ALG+DD +F L R G V I I G Sbjct: 61 FYPPTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIEDEVRHAGQVVITITG 118