BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1286.p         (202 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003980074.1| hypothetical protein AXYL_04039 [Achromobact...    80   1e-13
ref|YP_002933437.1| hypothetical protein NT01EI_2026 [Edwardsiel...    74   2e-11
ref|ZP_04591289.1| hypothetical protein POR16_28797 [Pseudomonas...    74   2e-11
ref|ZP_03398707.1| hypothetical protein PSPTOT1_4058 [Pseudomona...    73   3e-11
ref|ZP_06714866.1| gp74 [Edwardsiella tarda ATCC 23685] >gi|2910...    72   4e-11

>ref|YP_003980074.1| hypothetical protein AXYL_04039 [Achromobacter xylosoxidans A8]
 gb|ADP17359.1| hypothetical protein AXYL_04039 [Achromobacter xylosoxidans A8]
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 12/117 (10%)

Query: 59  LKRKTPLRPGTKPLKRTGFAKSGAGLLRVA-----SSQMRA-RKTSKPKMTKIRASA--- 109
           L+RKTPLR  T P+KR    K+ A ++R        + M+A +K  KP  T  R  A   
Sbjct: 3   LQRKTPLRQKT-PMKRGAPLKAKAPMMRAKPLPPPRAAMKAHKKGKKPPKTVYRNPALLD 61

Query: 110 --RDQECTLRFPLVCNHRTDTTVLCHSNQLNDGKGMGLKAPDTRAAYGCSACHDVLD 164
             + +EC LR P  C   TDTTV CHSNQ+ DGKG G+KA D   A+GC  CH  LD
Sbjct: 62  LAKGEECLLRVPKYCQGGTDTTVACHSNQIRDGKGKGIKAHDWAIAFGCGGCHFFLD 118


>ref|YP_002933437.1| hypothetical protein NT01EI_2026 [Edwardsiella ictaluri 93-146]
 gb|ACR69202.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 100

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/77 (55%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 106 RASARDQECTLRFPLVCNHRTDTTVLCHSNQLNDGKGMGLKAPDTRAAYGCSACHDVLDG 165
           R SAR Q CTL+ P +CN    T VLCH    +   GMG K+ D  A YGCSACHDVLDG
Sbjct: 14  RESARGQGCTLQIPGICNGDPQTVVLCH--LASPMHGMGYKSDDFWAVYGCSACHDVLDG 71

Query: 166 RAP---RPAGMTHEQML 179
           RAP   RP G   E ML
Sbjct: 72  RAPYDWRP-GEREEVML 87


>ref|ZP_04591289.1| hypothetical protein POR16_28797 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gb|EGI05742.1| hypothetical protein POR16_28797 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 101

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 101 KMTKIRASARDQECTLRFPLVCNHRTDTTVLCHSNQLNDGKGMGLKAPDTRAAYGCSACH 160
           K TK+  +ARD+EC +R+P  C+  + TTVL H  +L    GMG+K  D +AA+ C+ CH
Sbjct: 3   KQTKLTNAARDRECQIRYP-GCSSESSTTVLAHY-RLAGTCGMGIKPNDLQAAWACAYCH 60

Query: 161 DVLDGRAPRPAGMTHEQMLERFEEAVTLTHQVLARKGLLK 200
           D+ DGR   PA ++ E++     E V  T   L R+G++K
Sbjct: 61  DIADGRLRAPAVLSREEVRLFHAEGVMRTQDALIREGMVK 100


>ref|ZP_03398707.1| hypothetical protein PSPTOT1_4058 [Pseudomonas syringae pv. tomato
           T1]
 ref|ZP_07230050.1| hypothetical protein PsyrptM_03310 [Pseudomonas syringae pv. tomato
           Max13]
 gb|EEB58319.1| hypothetical protein PSPTOT1_4058 [Pseudomonas syringae pv. tomato
           T1]
          Length = 98

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 102 MTKIRASARDQECTLRFPLVCNHRTDTTVLCHSNQLNDGKGMGLKAPDTRAAYGCSACHD 161
           M+K+  +ARD+EC +R+P  C+  + TTVL H  +L    GMG+K  D +AA+ C+ CHD
Sbjct: 1   MSKLTNAARDRECQIRYP-GCSSESSTTVLAHY-RLAGTCGMGIKPNDLQAAWACAYCHD 58

Query: 162 VLDGRAPRPAGMTHEQMLERFEEAVTLTHQVLARKGLLK 200
           + DGR   PA ++ E++     E V  T   L R+G++K
Sbjct: 59  IADGRLRAPAVLSREEVRLFHAEGVMRTQDALIREGMVK 97


>ref|ZP_06714866.1| gp74 [Edwardsiella tarda ATCC 23685]
 gb|EFE22804.1| gp74 [Edwardsiella tarda ATCC 23685]
          Length = 104

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/77 (55%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 106 RASARDQECTLRFPLVCNHRTDTTVLCHSNQLNDGKGMGLKAPDTRAAYGCSACHDVLDG 165
           R SAR Q CTL+ P +CN    T VLCH    +   GMG K+ D  A YGCSACHDVLDG
Sbjct: 13  RESARGQGCTLQIPGICNGDPQTVVLCH--LASPMHGMGYKSDDFWAVYGCSACHDVLDG 70

Query: 166 RAP---RPAGMTHEQML 179
           RAP   RP G   E ML
Sbjct: 71  RAPYDWRP-GEREEVML 86