BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1278.p         (205 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06057638.1| predicted protein [Acinetobacter calcoaceticu...    65   7e-09

>ref|ZP_06057638.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
 gb|EEY78937.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
          Length = 183

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 31  IKSEVIAANLAALIYHCGKSRAAIAEELGMHKSAVTRLLSGKNNTKLKTIWEITSHLGFD 90
           IK E +A++L  L+ H   SR+ +A++LG  K  VT++LSG  N  +KTI  IT  LG+D
Sbjct: 18  IKMEQVASHLVGLLRHNKISRSELAQKLGWSKGRVTKVLSGDVNLTIKTITTITQKLGYD 77

Query: 91  FDVVFHNASVPPPLQPW--DHESPLEAESHYVQILTNDFVPAKFFDLQVQTQDEVVRDHV 148
           F+VVFHN +   P QPW  D E  +        ++ +  + A     Q+++ D+VV   +
Sbjct: 78  FEVVFHNKNYEKPKQPWQIDREKAMPTP-----VIKSRNIEALNVVFQLESGDQVVESVL 132

Query: 149 NGIGRERLYIS 159
            G  ++ LY+S
Sbjct: 133 AGKEKD-LYVS 142