BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1272.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACD39253.1| hypothetical protein PACL_0465 [Pseudomonas aerug... 144 2e-32 gb|EGM14389.1| hypothetical protein PA13_25281 [Pseudomonas aeru... 139 5e-31 ref|YP_002438938.1| hypothetical protein PLES_13341 [Pseudomonas... 138 1e-30 gb|ACD38959.1| hypothetical protein PACL_0719 [Pseudomonas aerug... 136 5e-30 gb|AEO73822.1| hypothetical protein PAM18_1335 [Pseudomonas aeru... 129 9e-28 >gb|ACD39253.1| hypothetical protein PACL_0465 [Pseudomonas aeruginosa] Length = 288 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 103/264 (39%), Positives = 152/264 (57%), Gaps = 10/264 (3%) Query: 1 MSKPSWRNLIAQGLVKRSDSGMLVRREAIRIVEGFNLRDAEKPSFRPAIERLKAHMRRGG 60 M+ S++ +I G +KR+D+ M R E + GFNLR AE +I L ++ +GG Sbjct: 1 MAAKSFKQMIKDGDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGG 58 Query: 61 KVPALEVSLSADCAGVDVVEGHRRTISYNELAAEG-MPVE-----WIRIEPFEGSDRDRH 114 VPALEV + G+ VV+GHRR +Y +L AEG +P + W+ I F G+D +R Sbjct: 59 IVPALEVRPREE-GGMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERV 117 Query: 115 MRVYTSQDNEKLEPLELARGYKRDKALFNMSNEELAQEIGRTREHVRQMLLLANAPHSVQ 174 +RV TSQ+ KL PLELA GYKR A F + E++AQ++GRTR+HV Q+L++ NA VQ Sbjct: 118 LRVITSQEGRKLSPLELAHGYKRLIA-FGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQ 176 Query: 175 MMVRDGVVTASTAIDALTEHGDGAAQVLGAAKDIAAASGQKKVRPASMRPWAPPARAVLP 234 ++ G V A+TA + +HG+ A QVLG A+G KV P ++ P + Sbjct: 177 QLISSGAVAATTAARIVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVPRAILDD 236 Query: 235 MVSAVDAVVQAIPESVRQALQDKP 258 ++ +V A P ++R L + P Sbjct: 237 LLKVTTDIVDAFPTALRAGLAEGP 260 >gb|EGM14389.1| hypothetical protein PA13_25281 [Pseudomonas aeruginosa 138244] Length = 288 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 104/264 (39%), Positives = 154/264 (58%), Gaps = 10/264 (3%) Query: 1 MSKPSWRNLIAQGLVKRSDSGMLVRREAIRIVEGFNLRDAEKPSFRPAIERLKAHMRRGG 60 M+ S++ +I G +KR+D+ M R E + GFNLR AE +I L ++ +GG Sbjct: 1 MAAKSFKQMIKDGDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGG 58 Query: 61 KVPALEVSLSADCAGVDVVEGHRRTISYNELAAEG-MPVE-----WIRIEPFEGSDRDRH 114 VPALEV + G+ VV+GHRR +Y +L AEG +P + W+ I F G+D +R Sbjct: 59 IVPALEVRPREE-GGMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVGFTGNDAERV 117 Query: 115 MRVYTSQDNEKLEPLELARGYKRDKALFNMSNEELAQEIGRTREHVRQMLLLANAPHSVQ 174 +RV TSQ+ KL PLELA GYKR A F + E++AQ++GRTR+HV Q+L++ NA VQ Sbjct: 118 LRVITSQEGRKLSPLELAHGYKRLIA-FGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQ 176 Query: 175 MMVRDGVVTASTAIDALTEHGDGAAQVLGAAKDIAAASGQKKVRPASMRPWAPPARAVLP 234 ++ G V A+TA + +HG+ A QVLG A+G KV P ++ A P + Sbjct: 177 QLISSGAVAATTAAKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPAVPRAILDD 236 Query: 235 MVSAVDAVVQAIPESVRQALQDKP 258 ++ +V+A P ++R L + P Sbjct: 237 LLKVTTDIVEAFPTALRAGLAEGP 260 >ref|YP_002438938.1| hypothetical protein PLES_13341 [Pseudomonas aeruginosa LESB58] ref|YP_002440113.1| hypothetical protein PLES_25131 [Pseudomonas aeruginosa LESB58] emb|CAW26062.1| hypothetical protein PLES_13341 [Pseudomonas aeruginosa LESB58] emb|CAW27239.1| hypothetical protein PLES_25131 [Pseudomonas aeruginosa LESB58] Length = 288 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 103/264 (39%), Positives = 153/264 (57%), Gaps = 10/264 (3%) Query: 1 MSKPSWRNLIAQGLVKRSDSGMLVRREAIRIVEGFNLRDAEKPSFRPAIERLKAHMRRGG 60 M+ S++ +I G +KR+D+ M R E + GFNLR AE +I L ++ +GG Sbjct: 1 MAAKSFKQMIKDGDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGG 58 Query: 61 KVPALEVSLSADCAGVDVVEGHRRTISYNELAAEG-MPVE-----WIRIEPFEGSDRDRH 114 VPALEV + G+ VV+GHRR +Y +L AEG +P + W+ I F G+D +R Sbjct: 59 IVPALEVRPREE-GGMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERV 117 Query: 115 MRVYTSQDNEKLEPLELARGYKRDKALFNMSNEELAQEIGRTREHVRQMLLLANAPHSVQ 174 +RV TSQ+ KL PLELA GYKR A F + E++AQ++GRTR+HV Q+L++ NA VQ Sbjct: 118 LRVITSQEGRKLSPLELAHGYKRLIA-FGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQ 176 Query: 175 MMVRDGVVTASTAIDALTEHGDGAAQVLGAAKDIAAASGQKKVRPASMRPWAPPARAVLP 234 ++ G V A+TA + +HG+ A QVLG A+G KV P ++ P + Sbjct: 177 QLISSGAVAATTAAKVVRKHGEAAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVPRAILDD 236 Query: 235 MVSAVDAVVQAIPESVRQALQDKP 258 ++ +V+A P ++R L + P Sbjct: 237 LLKVTTDIVEAFPTALRAGLAEGP 260 >gb|ACD38959.1| hypothetical protein PACL_0719 [Pseudomonas aeruginosa] Length = 288 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 102/264 (38%), Positives = 152/264 (57%), Gaps = 10/264 (3%) Query: 1 MSKPSWRNLIAQGLVKRSDSGMLVRREAIRIVEGFNLRDAEKPSFRPAIERLKAHMRRGG 60 M+ S++ +I G +KR+D+ M R E + GFNLR AE +I L ++ +GG Sbjct: 1 MAAKSFKQMIKDGDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGG 58 Query: 61 KVPALEVSLSADCAGVDVVEGHRRTISYNELAAEG-MPVE-----WIRIEPFEGSDRDRH 114 VPALEV + G+ VV+GHRR +Y +L AEG +P + W+ I F G+D +R Sbjct: 59 IVPALEVRPREE-GGMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERV 117 Query: 115 MRVYTSQDNEKLEPLELARGYKRDKALFNMSNEELAQEIGRTREHVRQMLLLANAPHSVQ 174 +RV TSQ+ KL PLELA GYKR A F + E++AQ++G+TR+HV Q+L++ NA VQ Sbjct: 118 LRVITSQEGRKLSPLELAHGYKRLIA-FGWTVEQIAQKMGKTRQHVDQVLVVGNANTDVQ 176 Query: 175 MMVRDGVVTASTAIDALTEHGDGAAQVLGAAKDIAAASGQKKVRPASMRPWAPPARAVLP 234 ++ G V A+TA + +HG+ A QVLG A+G KV P ++ P + Sbjct: 177 QLISSGAVAATTAAKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVPRAILDD 236 Query: 235 MVSAVDAVVQAIPESVRQALQDKP 258 ++ +V A P ++R L + P Sbjct: 237 LLKVTTDIVDAFPTALRAGLAEGP 260 >gb|AEO73822.1| hypothetical protein PAM18_1335 [Pseudomonas aeruginosa M18] Length = 280 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 100/256 (39%), Positives = 146/256 (57%), Gaps = 10/256 (3%) Query: 9 LIAQGLVKRSDSGMLVRREAIRIVEGFNLRDAEKPSFRPAIERLKAHMRRGGKVPALEVS 68 +I G +KR+D+ M R E + GFNLR AE +I L ++ +GG VPALEV Sbjct: 1 MIKDGDLKRADA-MKARLENLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVR 58 Query: 69 LSADCAGVDVVEGHRRTISYNELAAEG-MPVE-----WIRIEPFEGSDRDRHMRVYTSQD 122 + G+ VV+GHRR +Y +L AEG +P + W+ I F G+D +R +RV TSQ+ Sbjct: 59 PREE-GGMWVVDGHRRRRAYLKLDAEGRLPRDQNGEFWVPIVAFAGNDAERVLRVITSQE 117 Query: 123 NEKLEPLELARGYKRDKALFNMSNEELAQEIGRTREHVRQMLLLANAPHSVQMMVRDGVV 182 KL LELA GYKR A F + E++AQ++GRTR+HV Q+L++ NA VQ ++ G V Sbjct: 118 GRKLSSLELAHGYKRLIA-FGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQQLISSGAV 176 Query: 183 TASTAIDALTEHGDGAAQVLGAAKDIAAASGQKKVRPASMRPWAPPARAVLPMVSAVDAV 242 A+TA + +HG+ A QVLG A+G KV P ++ P + ++ + Sbjct: 177 AATTAAKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPKAVAEPVVPRAILEELLKLNREI 236 Query: 243 VQAIPESVRQALQDKP 258 V A P ++R L + P Sbjct: 237 VTAFPTALRAGLAEGP 252