BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1268.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK10827.1| hypothetical protein PAJ_0747 [Pantoea ananatis ... 144 1e-32 ref|ZP_08638338.1| hypothetical protein GME_16642 [Halomonas sp.... 142 5e-32 gb|EGW62144.1| hypothetical protein DsuiDRAFT_00853 [Dechlorosom... 132 4e-29 ref|YP_002330277.1| hypothetical protein E2348C_2779 [Escherichi... 132 4e-29 ref|ZP_07657659.1| PmgT [Roseibium sp. TrichSKD4] >gi|307774594|... 132 5e-29 >dbj|BAK10827.1| hypothetical protein PAJ_0747 [Pantoea ananatis AJ13355] Length = 250 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 102/260 (39%), Positives = 133/260 (51%), Gaps = 40/260 (15%) Query: 4 RRDPSMKEGPILMNSPMVRATLADHKTNTRREI------IRLGGFGKITQFGRSDTPGYD 57 +R P+M+E PIL+N+ MVRA L KT TRR I +++ G I+ D D Sbjct: 4 KRSPAMRERPILLNAEMVRAVLDGRKTQTRRIIQSPAKNMQVRGHECISYRAPGDKWYQD 63 Query: 58 WHF--RDSAMRWHDLLHSQLIKACPYGQSGDRLWVRETF-VQGFEYDPVTDRLRQFDEDG 114 + F RD + W D H Q + CP+G GDRLWVRETF V D T Sbjct: 64 YVFSMRDRSGTWQDYKHEQFLAKCPFGAVGDRLWVRETFRVHSRATDVAT---------- 113 Query: 115 NELPKKIWYRATDSISWSDDAGW----ETNVP-----WKPSIHMPRSACRILLEITGVRV 165 + Y+A++ SW+ + N P W PS+HMPR A RI LEITGVRV Sbjct: 114 ------LVYKASEQQSWTQQVHRVPIEKCNKPAVIDTWTPSVHMPRWASRITLEITGVRV 167 Query: 166 ERLQDISNADCWAEGI--EEVDGTLDPLKICELAKRMGRCIDD----PSPTFAALWESIS 219 ERL IS+ D EG+ EE + + + ++A R P F LW+SI Sbjct: 168 ERLNSISHRDACREGLFREEYNWRENEFPLDDIAYRTSSAAKTRYSCPKRCFQELWQSIY 227 Query: 220 GPGSWDANPWVWVIEFRRIK 239 G SW ANPWVWVIEF+R++ Sbjct: 228 GVDSWQANPWVWVIEFKRVE 247 >ref|ZP_08638338.1| hypothetical protein GME_16642 [Halomonas sp. TD01] gb|EGP18405.1| hypothetical protein GME_16642 [Halomonas sp. TD01] Length = 258 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 105/259 (40%), Positives = 129/259 (49%), Gaps = 35/259 (13%) Query: 10 KEGPILMNSPMVRATLADHKTNTRREI-----IRLGGFGKITQFGRSDTPGYDWHFRDSA 64 KE PIL N+ MVRA L HKT TRR + + + F +T R T DW + A Sbjct: 3 KERPILFNAAMVRAILNGHKTQTRRAMKPQPAVHVDHFRHVTTCAR--TGRMDWQACNKA 60 Query: 65 MRWHDLLHSQ-----LIKACPYGQSGDRLWVRETF-VQGFEYDPVTDRLRQFDEDGNELP 118 + + I CPYGQ GDRLWVRET+ V +D +R Q+ D P Sbjct: 61 KKPVYAFKKKPCFVTEIAQCPYGQPGDRLWVRETWGVVSHSFDANGER-SQYQPDRPATP 119 Query: 119 KK------------IWYRATDSISWS--DDAGWETNVPWKPSIHMPRSACRILLEITGVR 164 + + Y A + W+ DD G T WKPSIHMPR A RI LEI VR Sbjct: 120 IQEMPFGQGYYHGHVIYAADGAFEWAGDDDGGGNTRSAWKPSIHMPRIASRITLEIVRVR 179 Query: 165 VERLQDISNADCWAEGIEEVDGTLDPLKICELAKRMGR----CIDDPSPTFAALWESISG 220 VERLQDIS D AEGIE +G + G C P +F +LWE I+G Sbjct: 180 VERLQDISKEDATAEGIEPPEGETYRDYAVKPEDNEGHDYYLC---PQDSFISLWEKING 236 Query: 221 PGSWDANPWVWVIEFRRIK 239 S ANPWVWVIEF+R++ Sbjct: 237 LDSCKANPWVWVIEFKRVE 255 >gb|EGW62144.1| hypothetical protein DsuiDRAFT_00853 [Dechlorosoma suillum PS] Length = 224 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 102/236 (43%), Positives = 125/236 (52%), Gaps = 27/236 (11%) Query: 9 MKEGPILMNSPMVRATLADHKTNTRREIIRLGGFGKITQFGRSDTPGYDWHFRDSAMRWH 68 MKE PIL + PMVRA L KT TRR + + + +W R A Sbjct: 1 MKERPILFSGPMVRAILEGRKTQTRRAV------KPQPEINSAGNLSGEWLNRPLAGLLL 54 Query: 69 DLLHSQLIKACPYGQSGDRLWVRETFVQGFEYDPVTDRLRQFDEDGNELPKKIWYRATDS 128 L I CPYGQSGDRLWVRE + G E + D +R + D +P + RA + Sbjct: 55 PKLQDIAIH-CPYGQSGDRLWVREACI-GEELESGLDGVR-YPADNAFVPIENTERA--A 109 Query: 129 ISWSDDAGWETNV-----PWKPSIHMPRSACRILLEITGVRVERLQDISNADCWAEGIEE 183 I+W + + P PSIHMPR A RILLEITGVRVERLQDI+ ADC EG Sbjct: 110 INWLTLHTYRGHSGHPVGPQVPSIHMPRWASRILLEITGVRVERLQDITPADCVEEGY-- 167 Query: 184 VDGTLDPLKICELAKRMGRCIDDPSPTFAALWESISGPGSWDANPWVWVIEFRRIK 239 V ++P + EL +D + LWESI+G GSW ANPWVWV+EFR K Sbjct: 168 VSAPVEPYQSEELV-----ALD----WYRHLWESINGLGSWAANPWVWVVEFRTCK 214 >ref|YP_002330277.1| hypothetical protein E2348C_2779 [Escherichia coli O127:H6 str. E2348/69] emb|CAS10327.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] Length = 237 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 128/247 (51%), Gaps = 30/247 (12%) Query: 9 MKEGPILMNSPMVRATLADHKTNTRREI-IRLGGFGKITQFGRSDTPGYDWHFRDSAMRW 67 MKE ++ N MVRA L KT TRR + + F +I + R D G W + + A Sbjct: 1 MKERGMIFNGEMVRALLDGRKTQTRRPLKWKQTRFTEIAE--RED--GSHWPWSEDAENV 56 Query: 68 HDLLHSQLIKACPYGQSGDRLWVRETF------------VQGFEYDPVTDRLRQFDEDGN 115 D H CP+G GDR+WVRET+ +Q + D + + Sbjct: 57 CDFWHP-----CPFGAVGDRIWVRETWGVVSHELDEDGRIQPWIPDRPATAIHEMPFGNG 111 Query: 116 ELPKKIWYRATDSISWSDDAGWETNVP-WKPSIHMPRSACRILLEITGVRVERLQDISNA 174 Y A +W DD G+E WKPSIHMPR+ACRILLE+TGVRVERL IS Sbjct: 112 YYSGHAIYAADGDFTWGDDDGYEDGRSCWKPSIHMPRAACRILLEVTGVRVERLNAISEE 171 Query: 175 DCWAEGIEEVDGTLDPLKICELAKRMGRCIDDPSPT--FAALWESISGPGSWDANPWVWV 232 D AEGI + G L+ C + G DP T FA LW+SI G +W+ANPWVWV Sbjct: 172 DARAEGIID-GGCLN----CGEPEPCGCANPDPDATDAFAYLWQSIYGQENWNANPWVWV 226 Query: 233 IEFRRIK 239 IEF+R++ Sbjct: 227 IEFKRVE 233 >ref|ZP_07657659.1| PmgT [Roseibium sp. TrichSKD4] gb|EFO33804.1| PmgT [Roseibium sp. TrichSKD4] Length = 258 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 98/256 (38%), Positives = 124/256 (48%), Gaps = 35/256 (13%) Query: 9 MKEGPILMNSPMVRATLADHKTNTRREIIRLGGFGKITQFGRSDTPGYDWHFRDSAMRWH 68 M+ L MV L D K TRR + +L FG IT+FG SDT GYDWHFRD MRWH Sbjct: 1 MRVRDTLFTGSMVIGLLEDRKRQTRRVMNKLLRFGPITEFGPSDTRGYDWHFRDREMRWH 60 Query: 69 DLLHSQLIKACPYGQSGDRLWVRETFVQGFEYDPVTDRLRQFDEDGNELPKKIWYRATDS 128 DL H +L+K PY Q GD L+VRE + D V D+ G I Y A D+ Sbjct: 61 DLRHDKLLKVLPY-QVGDLLYVREAWKTFVSLDKVKPSELLNDKRG----AGILYLA-DN 114 Query: 129 ISWSDDAGWETNVP-----------WKPSIHMPRSACRILLEITGVRVERLQDISNADCW 177 S A E + +P +HMPR A RI L++T VRV+RLQ+IS D Sbjct: 115 AGLSLSANGERHESQVREDLNAFGRLRPGMHMPRWASRITLKVTDVRVQRLQEISEKDAK 174 Query: 178 AEGI---------EEVDGTLDPLKICELAKRMGRCIDDPSPTFAALWESISGPG-----S 223 AEG+ DPL+ + G + F LW+S++G + Sbjct: 175 AEGVCAWVESQAKYPWGDISDPLRHLMVKNTFG----NAKTAFNCLWDSLNGDRDAGIYA 230 Query: 224 WDANPWVWVIEFRRIK 239 WDANPWV + F IK Sbjct: 231 WDANPWVVAVSFEVIK 246