BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1258.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775419.1| UDP-glucose 4-epimerase [Herbaspirillum sero... 606 e-171 ref|YP_001352334.1| UDP-glucose 4-epimerase [Janthinobacterium s... 499 e-139 ref|YP_001099047.1| UDP-glucose 4-epimerase [Herminiimonas arsen... 482 e-134 ref|YP_546115.1| UDP-galactose 4-epimerase [Methylobacillus flag... 468 e-130 ref|YP_004577560.1| UDP-glucose 4-epimerase [Vibrio anguillarum ... 464 e-128 >ref|YP_003775419.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ63511.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 343 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 290/341 (85%), Positives = 315/341 (92%) Query: 1 MTQATILVTGGAGYIGSHTCVELLHAGYDVVVLDNLCNSRRSVIDRVAQISGRTPVFIEG 60 MTQATILVTGGAGYIGSHTCVEL+HAGY VVVLDNLCNSR SVIDR+AQISG+ P F++G Sbjct: 1 MTQATILVTGGAGYIGSHTCVELIHAGYAVVVLDNLCNSRASVIDRIAQISGQRPHFVQG 60 Query: 61 DIRDAALLDQIFGTHAIDAVIHFAGLKAVGESVQQPVRYYDNNVNGSNLLFAAMARHGVK 120 DIRD A+LD IF +H I+AVIHFAGLKAVGESV QP+RYYDNNV+GSN+LF AMA HGVK Sbjct: 61 DIRDRAVLDGIFKSHRIEAVIHFAGLKAVGESVAQPLRYYDNNVHGSNVLFEAMAAHGVK 120 Query: 121 KLVFSSSATVYGDPASVPITEDFPLSATNPYGRSKLMVEQILGDIHVSDPDWHIALLRYF 180 +VFSSSATVYGDPASVPITE+FPLSATNPYGRSKLMVEQILGD+HV+DP W IALLRYF Sbjct: 121 NIVFSSSATVYGDPASVPITEEFPLSATNPYGRSKLMVEQILGDLHVADPSWRIALLRYF 180 Query: 181 NPVGAHESGLIGEDPSGIPNNLLPFIAQVADGRRASLAVYGSDYPTVDGTGVRDYIHVVD 240 NPVGAHESGLIGEDPSGIPNNLLPFIAQVADGRRA+L+VYGSDYPT DGTGVRDYIHVVD Sbjct: 181 NPVGAHESGLIGEDPSGIPNNLLPFIAQVADGRRAALSVYGSDYPTPDGTGVRDYIHVVD 240 Query: 241 LALGHLKTLVKLGEGPGVRIYNLGTGRGNSVLEMLAAFEKACGKKLPHQLTARRPGDIAM 300 LALGHLKTL KL +GPGV YNLGTGRGNSVLEMLAAFE+ACG KLP+QL RRPGDIA Sbjct: 241 LALGHLKTLRKLEQGPGVYTYNLGTGRGNSVLEMLAAFEQACGNKLPYQLVDRRPGDIAC 300 Query: 301 CYAATDRAERELGWRAVRDVDAMCADTWRWQSLAKKLATEE 341 CYAAT+RAERELGWRA R ++AMCADTWRWQ+LAK+LA EE Sbjct: 301 CYAATERAERELGWRAQRGIEAMCADTWRWQALAKRLAQEE 341 >ref|YP_001352334.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] gb|ABR88916.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] Length = 339 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 231/332 (69%), Positives = 280/332 (84%), Gaps = 1/332 (0%) Query: 6 ILVTGGAGYIGSHTCVELLHAGYDVVVLDNLCNSRRSVIDRVAQISGRTPVFIEGDIRDA 65 ILVTGGAGYIGSHTCVEL+ AGY VVV+DNLCNS+ +V+DRVA I+G + FIE D+RD Sbjct: 3 ILVTGGAGYIGSHTCVELIKAGYQVVVVDNLCNSKLTVLDRVATITGCSIPFIEADLRDR 62 Query: 66 ALLDQIFGTHAIDAVIHFAGLKAVGESVQQPVRYYDNNVNGSNLLFAAMARHGVKKLVFS 125 + +++IF + DAV+HFAGLKAVGESV +P+RYYDNNV GS +LF MA++GVK LVFS Sbjct: 63 SAMEEIFSAYDFDAVVHFAGLKAVGESVAEPLRYYDNNVEGSLVLFQVMAKYGVKSLVFS 122 Query: 126 SSATVYGDPASVPITEDFPLSATNPYGRSKLMVEQILGDIHVSDPDWHIALLRYFNPVGA 185 SSATVYGDPA+VPI EDFPL+ATNPYGRSKLM+E++L D+ SDP W IALLRYFNP GA Sbjct: 123 SSATVYGDPATVPIVEDFPLAATNPYGRSKLMIEEMLRDVATSDPSWRIALLRYFNPAGA 182 Query: 186 HESGLIGEDPSGIPNNLLPFIAQVADGRRASLAVYGSDYPTVDGTGVRDYIHVVDLALGH 245 HESGLIGEDP+ IPNNL P++AQVA GRR L+VYGSDYPT DGTGVRDYIHVVDLALGH Sbjct: 183 HESGLIGEDPNDIPNNLFPYVAQVASGRRELLSVYGSDYPTTDGTGVRDYIHVVDLALGH 242 Query: 246 LKTLVKL-GEGPGVRIYNLGTGRGNSVLEMLAAFEKACGKKLPHQLTARRPGDIAMCYAA 304 +KTL +L GV YNLGTG G+SVL+M+ AFEKA G+K+P+++ ARRPGDIA+CYA Sbjct: 243 VKTLARLMNTEAGVLAYNLGTGCGSSVLQMICAFEKASGRKIPYRIVARRPGDIAVCYAD 302 Query: 305 TDRAERELGWRAVRDVDAMCADTWRWQSLAKK 336 A+RELGWRA R ++ MCAD+WRWQ+++++ Sbjct: 303 ASLAQRELGWRAERSIEQMCADSWRWQAMSEE 334 >ref|YP_001099047.1| UDP-glucose 4-epimerase [Herminiimonas arsenicoxydans] emb|CAL60920.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Herminiimonas arsenicoxydans] Length = 339 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 227/332 (68%), Positives = 276/332 (83%), Gaps = 1/332 (0%) Query: 6 ILVTGGAGYIGSHTCVELLHAGYDVVVLDNLCNSRRSVIDRVAQISGRTPVFIEGDIRDA 65 ILVTGGAGYIGSHTCVEL++AGY VVV+DNLCNS+ SV++RVA I+G T FI+ D+R Sbjct: 3 ILVTGGAGYIGSHTCVELINAGYQVVVVDNLCNSKASVLERVAGITGATIPFIQADLRHR 62 Query: 66 ALLDQIFGTHAIDAVIHFAGLKAVGESVQQPVRYYDNNVNGSNLLFAAMARHGVKKLVFS 125 +++IF + DAV+HFAGLKAVGESV +P+RYYDNNV GS +L MA+H V KLVFS Sbjct: 63 NAIEKIFTQYNFDAVMHFAGLKAVGESVTEPLRYYDNNVEGSLVLLQVMAKHDVTKLVFS 122 Query: 126 SSATVYGDPASVPITEDFPLSATNPYGRSKLMVEQILGDIHVSDPDWHIALLRYFNPVGA 185 SSATVYGDPA+VPI EDFPL+ATNPYGRSKLM+E++L D+ SDP W IALLRYFNP GA Sbjct: 123 SSATVYGDPATVPILEDFPLAATNPYGRSKLMIEEMLRDLAHSDPAWRIALLRYFNPAGA 182 Query: 186 HESGLIGEDPSGIPNNLLPFIAQVADGRRASLAVYGSDYPTVDGTGVRDYIHVVDLALGH 245 HESGLIGEDP+ IPNNL P++AQVA GRR L+VYG DYPT DGTGVRDYIHVVDLA+GH Sbjct: 183 HESGLIGEDPNDIPNNLFPYVAQVASGRRDLLSVYGDDYPTDDGTGVRDYIHVVDLAIGH 242 Query: 246 LKTLVK-LGEGPGVRIYNLGTGRGNSVLEMLAAFEKACGKKLPHQLTARRPGDIAMCYAA 304 +KTL K L GV+ YNLGTG G+SVL+M+ AFE+A G+++P+++ ARRPGDIA+CYA Sbjct: 243 VKTLEKLLASAAGVQAYNLGTGCGSSVLQMIQAFERASGRRVPYRVVARRPGDIAVCYAD 302 Query: 305 TDRAERELGWRAVRDVDAMCADTWRWQSLAKK 336 A+RELGWRA R ++ MC DTWRWQS++++ Sbjct: 303 ASLAQRELGWRAERSIEQMCVDTWRWQSMSEE 334 >ref|YP_546115.1| UDP-galactose 4-epimerase [Methylobacillus flagellatus KT] gb|ABE50274.1| UDP-galactose 4-epimerase [Methylobacillus flagellatus KT] Length = 334 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 221/332 (66%), Positives = 267/332 (80%), Gaps = 1/332 (0%) Query: 6 ILVTGGAGYIGSHTCVELLHAGYDVVVLDNLCNSRRSVIDRVAQISGRTPVFIEGDIRDA 65 +LVTGG GYIGSH CVEL++AGY+VVVLDN NS+ ++DR+ QI+G+ PV +EGD+RD Sbjct: 2 LLVTGGTGYIGSHACVELINAGYEVVVLDNFSNSQAHIVDRIKQITGKAPVLVEGDVRDE 61 Query: 66 ALLDQIFGTHAIDAVIHFAGLKAVGESVQQPVRYYDNNVNGSNLLFAAMARHGVKKLVFS 125 ALL +F + AV+HFAGLKAVGESV QP+RYYDNNV GS L M H VK+LVFS Sbjct: 62 ALLSDLFSRYPFQAVMHFAGLKAVGESVAQPLRYYDNNVAGSVTLLRVMQAHDVKRLVFS 121 Query: 126 SSATVYGDPASVPITEDFPLSATNPYGRSKLMVEQILGDIHVSDPDWHIALLRYFNPVGA 185 SSATVYGDPASVPI EDFPLSATNPYG SKLMVE IL D+ VSDP+W IA+LRYFNPVGA Sbjct: 122 SSATVYGDPASVPIREDFPLSATNPYGASKLMVEDILRDLAVSDPEWRIAILRYFNPVGA 181 Query: 186 HESGLIGEDPSGIPNNLLPFIAQVADGRRASLAVYGSDYPTVDGTGVRDYIHVVDLALGH 245 HESGLIGE+P+G+PNNL+P+I QVA G+R SL+V+GSDYPTVDGTGVRDYIHVVDL +GH Sbjct: 182 HESGLIGENPNGMPNNLMPYITQVAQGQRESLSVFGSDYPTVDGTGVRDYIHVVDLVVGH 241 Query: 246 LKTLVKLGEGPGVRIYNLGTGRGNSVLEMLAAFEKACGKKLPHQLTARRPGDIAMCYAAT 305 L+ L +L + GV NLGTG+G SVLEM+ AFE A G+ +P+QL ARRPGD+A Y Sbjct: 242 LRALERLDKEAGVFTCNLGTGQGYSVLEMVKAFEDASGQAVPYQLVARRPGDVAASYTDP 301 Query: 306 DRAERELGWRAVRDVDAMCADTWRW-QSLAKK 336 AE+ LGW+A R ++ MC D+W W Q+LA++ Sbjct: 302 AYAEQALGWKATRGIEQMCKDSWHWQQNLAQR 333 >ref|YP_004577560.1| UDP-glucose 4-epimerase [Vibrio anguillarum 775] gb|AEH34603.1| UDP-glucose 4-epimerase [Vibrio anguillarum 775] Length = 348 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 214/327 (65%), Positives = 262/327 (80%) Query: 6 ILVTGGAGYIGSHTCVELLHAGYDVVVLDNLCNSRRSVIDRVAQISGRTPVFIEGDIRDA 65 +LVTGG GYIGSHTC++++HAG V+ DNL NS+ SV++R+ ++SG P+F+ GD+R+ Sbjct: 13 VLVTGGMGYIGSHTCIQMIHAGMTPVIFDNLYNSKASVLERIEKVSGVKPLFVHGDVRNQ 72 Query: 66 ALLDQIFGTHAIDAVIHFAGLKAVGESVQQPVRYYDNNVNGSNLLFAAMARHGVKKLVFS 125 A L ++ I AVIHFAGLKAVGESV++P+ YYDNNVNG+ +L AAM GVK LVFS Sbjct: 73 AQLVEVMKAQNIQAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVAAMREAGVKALVFS 132 Query: 126 SSATVYGDPASVPITEDFPLSATNPYGRSKLMVEQILGDIHVSDPDWHIALLRYFNPVGA 185 SSATVYGDPASVPITEDFP SATNPYGRSKLMVE+ L D H ++PDW I LLRYFNPVG+ Sbjct: 133 SSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLADFHKANPDWSITLLRYFNPVGS 192 Query: 186 HESGLIGEDPSGIPNNLLPFIAQVADGRRASLAVYGSDYPTVDGTGVRDYIHVVDLALGH 245 H SG +GEDP GIPNNL+PF++QVA GRRA L+V+GSDYPT DGTGVRDYIHV+DLA GH Sbjct: 193 HPSGELGEDPQGIPNNLMPFVSQVAVGRRAFLSVFGSDYPTKDGTGVRDYIHVMDLADGH 252 Query: 246 LKTLVKLGEGPGVRIYNLGTGRGNSVLEMLAAFEKACGKKLPHQLTARRPGDIAMCYAAT 305 + L K+G+ G+ IYNLGTG G SVLEM+ AFE+A GK +P+QL RR GDIA C+A Sbjct: 253 IAALEKVGQQAGLHIYNLGTGNGYSVLEMVKAFEQASGKSVPYQLVERRAGDIAECWADP 312 Query: 306 DRAERELGWRAVRDVDAMCADTWRWQS 332 +A +LGW+A R ++AM DTWRWQS Sbjct: 313 SKAMADLGWKATRSLEAMTQDTWRWQS 339