BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1255.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352325.1| exopolysaccharide biosynthesis protein [Jant... 270 3e-70 ref|YP_001099038.1| putative exopolysaccharide biosynthesis prot... 268 1e-69 ref|YP_080767.1| polysaccharide pyruvyl transferase YvfF [Bacill... 206 4e-51 ref|YP_004645111.1| polysaccharide pyruvyl transferase YvfF [Pae... 205 9e-51 ref|ZP_03237780.1| polysaccharide pyruvyl transferase YvfF [Baci... 201 2e-49 >ref|YP_001352325.1| exopolysaccharide biosynthesis protein [Janthinobacterium sp. Marseille] gb|ABR89945.1| exopolysaccharide biosynthesis protein [Janthinobacterium sp. Marseille] Length = 346 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 145/312 (46%), Positives = 195/312 (62%), Gaps = 2/312 (0%) Query: 17 MNKHSEVMEGLKAHHAIIAGMLKGKRFHYIDIPIHDNIGDLLIMLGTLRFFETNNLKPAT 76 + H ++ + L H ++ ++ FHY+DIP H N+GDLLIM GTL FF + L P Sbjct: 9 LKNHKQLCKELMQRHEVLLELIGDAPFHYVDIPTHGNVGDLLIMHGTLAFFRKHGLSPKL 68 Query: 77 IATTHSFKHEWVKPGDVLVFHGGGNFGDLYGHIHQDREKVIMAFPGNQIILMPQTLFFSS 136 IA ++ EW+ GDV++FHGGGNFGDLY Q RE ++M+ P N+II++PQ+L FSS Sbjct: 69 IAPYDAYDPEWIDEGDVILFHGGGNFGDLYPCFQQLREDIVMSHPNNRIIVLPQSLHFSS 128 Query: 137 DAARAQSAANLSRHPDLHLFVRDLVSQKMAYEFTPHVYLVPDMAHQLYPVATPDKQ-GQG 195 A +A SA HPD+H+ VRD VS +MA F+ HVYL+PDMAHQLYP+ +K+ + Sbjct: 129 AAEQASSAEVFRSHPDVHICVRDEVSLQMAQAFSDHVYLLPDMAHQLYPLRAGNKRPSRH 188 Query: 196 IVRIQRVDKEKPNTPESLRQLSIRTTTDWIEVIGEDRKLINLFEKLEWRLNHHGWHSGLT 255 +RI RVD E +L L I T TDW E +GE + INLF + G Sbjct: 189 GLRISRVDDEG-GVHAALPGLDIDTITDWPEFVGEREEHINLFRRGLGGFYRRGMGRAAN 247 Query: 256 ALAKWYWAPVSRRYVKKAIKVFADHESVVTDRLHGHILACLMDKKHIVIDNSYGKNSTYM 315 + W S R VK A ++FA H+ +VTDRLHGHILACL+++++IV+DNSYGKNS Y+ Sbjct: 248 RILVRLWIAYSARLVKDAARLFARHDFIVTDRLHGHILACLLNRQNIVLDNSYGKNSRYV 307 Query: 316 NQWTIESPLTTL 327 WT S L L Sbjct: 308 AAWTQRSELVAL 319 >ref|YP_001099038.1| putative exopolysaccharide biosynthesis protein [Herminiimonas arsenicoxydans] emb|CAL60911.1| Putative exopolysaccharide polymerization protein PssK-like [Herminiimonas arsenicoxydans] Length = 329 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 141/309 (45%), Positives = 186/309 (60%), Gaps = 2/309 (0%) Query: 20 HSEVMEGLKAHHAIIAGMLKGKRFHYIDIPIHDNIGDLLIMLGTLRFFETNNLKPATIAT 79 H ++ L A H ++ ++ FHY+DIP+H NIGDLLIM GTL FF L+P IA Sbjct: 10 HGKLSAELMARHDVLRDLIGCAPFHYVDIPVHGNIGDLLIMHGTLAFFRKQGLRPKLIAP 69 Query: 80 THSFKHEWVKPGDVLVFHGGGNFGDLYGHIHQDREKVIMAFPGNQIILMPQTLFFSSDAA 139 ++ W+ P DV+VFHGGGNFGDLY + + RE+++ + P N+II++PQ+L FS+ Sbjct: 70 YFAYDACWIAPEDVIVFHGGGNFGDLYPYFQELRERIVQSHPENRIIVLPQSLHFSTPEK 129 Query: 140 RAQSAANLSRHPDLHLFVRDLVSQKMAYEFTPHVYLVPDMAHQLYPVATPD-KQGQGIVR 198 AQSA H D+HL VRD VS MA EFT VYL+PDMAHQL+ + G+G +R Sbjct: 130 MAQSAKIFRSHADMHLCVRDRVSFAMAQEFTDQVYLLPDMAHQLHLMDVHGLSSGEGSLR 189 Query: 199 IQRVDKEKPNTPESLRQLSIRTTTDWIEVIGEDRKLINLFEKLEWRLNHHGWHSGLTALA 258 I RVD E + L +S T TDW + +G INLF + G L Sbjct: 190 ISRVDDESRDHGRKLEAVS-DTVTDWPQFVGARETQINLFRRAIGAFFRRGLGRQANRLL 248 Query: 259 KWYWAPVSRRYVKKAIKVFADHESVVTDRLHGHILACLMDKKHIVIDNSYGKNSTYMNQW 318 W S R + A ++FA HE +VTDRLHGHILACL+++K+IV+DN YGKNS Y+ W Sbjct: 249 VLLWIAYSGRLIADAARLFAQHELIVTDRLHGHILACLLNRKNIVLDNIYGKNSRYVEAW 308 Query: 319 TIESPLTTL 327 T S L L Sbjct: 309 TGGSELVML 317 >ref|YP_080767.1| polysaccharide pyruvyl transferase YvfF [Bacillus licheniformis ATCC 14580] ref|YP_093193.1| YvfF [Bacillus licheniformis ATCC 14580] ref|ZP_08002059.1| YvfF protein [Bacillus sp. BT1B_CT2] gb|AAU25129.1| Polysaccharide pyruvyl transferase YvfF [Bacillus licheniformis ATCC 14580] gb|AAU42500.1| YvfF [Bacillus licheniformis ATCC 14580] gb|EFV70991.1| YvfF protein [Bacillus sp. BT1B_CT2] Length = 325 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 118/329 (35%), Positives = 190/329 (57%), Gaps = 23/329 (6%) Query: 7 LSISSQESQVMNKHSEVMEGLKAHHAIIAGMLKGKRFHYIDIPIHDNIGDLLIMLGTLRF 66 ++I+ + +K +E+++ + H +++ Y+D P++ N+GDLLIM GT F Sbjct: 1 MAITYSMDSLKHKLAEILDVIPRHSSVV----------YLDYPLYGNVGDLLIMKGTEAF 50 Query: 67 FETNNLKPATIATTHSFKHEWVKPGD-VLVFHGGGNFGDLYGHIHQDREKVIMAFPGNQI 125 FE +K +F P D ++V GGGNFGDLY H Q RE+V+ +P N+I Sbjct: 51 FEAYGIKVRERWNAENFIPGRRIPKDAIIVCQGGGNFGDLYPHFQQFRERVVEHYPDNRI 110 Query: 126 ILMPQTLFFSSDAARAQSAANLSRHPDLHLFVRDLVSQKMA---YEFTPHVYLVPDMAHQ 182 +++PQ++++ + ++ L+ HPDLHLF R+ S A +E ++ ++PDMAHQ Sbjct: 111 VILPQSIYYEHEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKNIKMMPDMAHQ 170 Query: 183 LYPVATP-DKQGQGIVRIQRVDKEKPNTPESLRQLSIRTTTDWIEVIGE-DRKLINLFEK 240 L+P+A P +K + ++R+ R DKE + SL++ T DW ++ E D++ I + Sbjct: 171 LWPIAAPAEKPSESVLRLIRTDKEANS---SLQKAGEPDTYDWNVILSEGDKRGIKRLQT 227 Query: 241 LEWRLNHHGWHSGLTALAKWYWAPVSRRYVKKAIKVFADHESVVTDRLHGHILACLMDKK 300 + N +G YW S V K+I+ F+ +ESVVT RLHGHIL+CL+ K+ Sbjct: 228 I----NVLNKKAGNPLPIASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKE 283 Query: 301 HIVIDNSYGKNSTYMNQWTIESPLTTLVR 329 ++VIDNSYGKN+ Y N W + P T L++ Sbjct: 284 NVVIDNSYGKNANYYNTWMKDIPNTKLIQ 312 >ref|YP_004645111.1| polysaccharide pyruvyl transferase YvfF [Paenibacillus mucilaginosus KNP414] gb|AEI45241.1| polysaccharide pyruvyl transferase YvfF [Paenibacillus mucilaginosus KNP414] Length = 324 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 121/312 (38%), Positives = 182/312 (58%), Gaps = 11/312 (3%) Query: 12 QESQVMNKHSEVMEGLKAHHAIIAGMLKGKRFHYIDIPIHDNIGDLLIMLGTLRFFETNN 71 + ++ ++ E+ E LK I+ + +G Y+D P+H N GD+LIM GT FF+ N Sbjct: 2 KSTKAIHPMDELKEKLKD---ILNVIPRGSNVFYLDYPVHSNGGDMLIMKGTEEFFKDYN 58 Query: 72 LKPATIATTHSFKHEWVKPGD-VLVFHGGGNFGDLYGHIHQDREKVIMAFPGNQIILMPQ 130 + + FK P D ++V HGGGNFGD+Y + RE VI +P ++I++MPQ Sbjct: 59 INVRARYSVLDFKEGTDIPSDCIIVLHGGGNFGDIYPAHQRLREMVIKNYPNHRIVVMPQ 118 Query: 131 TLFFSSDAARAQSAANLSRHPDLHLFVRDLVSQKMAY-EFTP-HVYLVPDMAHQLYPVAT 188 T+F+ S+ ++AA ++H DLH+++RD + ++A +FT +VYL PDMAHQL+P+A Sbjct: 119 TIFYKSEKEYDKTAAIFNKHRDLHVYLRDTLCYELALTKFTGCNVYLSPDMAHQLWPIAN 178 Query: 189 PDKQGQGIVRIQRVDKEKPNTPESLRQLSIRTTTDWIEVIGE-DRKLINLFEKLEWRLNH 247 P + + + R D E N +L S T DW + D K+ LF K+ Sbjct: 179 PKQTQKDTLYFLRTDVEAGNGQANLEVGSPADTLDWQTLFTPFDNKVAKLFSKMYTVKRM 238 Query: 248 HGWHSGLTALAKWYWAPVSRRYVKKAIKVFADHESVVTDRLHGHILACLMDKKHIVIDNS 307 G + L A WY + +KKAI++F+ + + T RLHGHIL+CLMDK++I+IDNS Sbjct: 239 AG--NSLPVGALWY--NYTDYLLKKAIELFSSYRVIKTSRLHGHILSCLMDKQNILIDNS 294 Query: 308 YGKNSTYMNQWT 319 YGKNS+Y WT Sbjct: 295 YGKNSSYYYTWT 306 >ref|ZP_03237780.1| polysaccharide pyruvyl transferase YvfF [Bacillus cereus H3081.97] gb|EDZ56249.1| polysaccharide pyruvyl transferase YvfF [Bacillus cereus H3081.97] Length = 313 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 184/306 (60%), Gaps = 21/306 (6%) Query: 24 MEGLKAH-HAIIAGMLKGKRFHYIDIPIHDNIGDLLIMLGTLRFFETNNLKPATIATTHS 82 ME LK I+ + K R Y++ P+++N+GDLLIM GT RFF+ N ++ + + Sbjct: 9 MERLKRELEQILTAIPKKSRIIYMEYPVYNNVGDLLIMKGTERFFKDNEIEVVARYSFMN 68 Query: 83 FKHEWVKPGD-VLVFHGGGNFGDLYGHIHQDREKVIMAFPGNQIILMPQTLFFSSDAARA 141 F+ + P D ++V GGGNFGDLY Q RE ++ ++P N+I+++PQT+++ S A Sbjct: 69 FRKKTKLPQDCIIVCQGGGNFGDLYRGPQQLREYLVESYPDNRIVILPQTIYYKSKANLK 128 Query: 142 QSAANLSRHPDLHLFVRDLVSQKM-AYEFTPHVYLVPDMAHQLYPVATPDKQGQGIVRIQ 200 ++AA ++H D+HLFVRD S ++ EF + YL PDMAHQL+P+ + + ++ Sbjct: 129 ETAAVFNKHKDVHLFVRDEKSYEIIKNEFNVNAYLSPDMAHQLWPIHVEEGAKKEVLHFI 188 Query: 201 RVDKE------KPNTPESLRQLSIRTTTDWIEVIGE-DRKLINLFEKLEWRLNHHGWHSG 253 R D E +PE DW ++ + D K +N+F+ + +++ ++ Sbjct: 189 RTDDEINLKLEGTGSPEG-------DILDWPVLLSKLDHKTVNMFQFIS-KIDRVMFN-- 238 Query: 254 LTALAKWYWAPVSRRYVKKAIKVFADHESVVTDRLHGHILACLMDKKHIVIDNSYGKNST 313 + + K W S V K+IKVF +++ + T RLHGHIL+CLM+K+++VIDNSYGKNST Sbjct: 239 ILPIHK-LWELYSDYLVNKSIKVFEEYQCISTSRLHGHILSCLMNKENVVIDNSYGKNST 297 Query: 314 YMNQWT 319 Y ++WT Sbjct: 298 YYDRWT 303