BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1230.p         (193 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002538131.1| conserved hypothetical protein [Ricinus comm...   199   1e-49
ref|YP_003774842.1| hypothetical protein Hsero_1418 [Herbaspiril...   193   1e-47
ref|YP_932515.1| hypothetical protein azo1011 [Azoarcus sp. BH72...    75   5e-12
ref|ZP_08503809.1| hypothetical protein METUNv1_00820 [Methylove...    65   6e-09
ref|ZP_03700246.1| conserved hypothetical protein [Lutiella nitr...    65   8e-09

>ref|XP_002538131.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF24253.1| conserved hypothetical protein [Ricinus communis]
          Length = 173

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 157/173 (90%), Positives = 162/173 (93%), Gaps = 2/173 (1%)

Query: 23  MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ 82
           MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ
Sbjct: 1   MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ 60

Query: 83  SLEDCYQRNPDALKAGIFTGWKDMHEYMAAKGIQTVTPPAPAADAAKDDAKSKDGKDGKD 142
           SLEDCYQRNPDALKAGIF GWKDMHEYMAAKGIQTVTPP P ADAAKDDAK KDGKD KD
Sbjct: 61  SLEDCYQRNPDALKAGIFAGWKDMHEYMAAKGIQTVTPPTPPADAAKDDAKGKDGKDSKD 120

Query: 143 -KDAKDSDRS-RARERDANRDNARSRDRESSSSSRDSGSDRRASREEKTPPKY 193
            KD+KDSDRS RARERD++RD+ARSRDRESSSS   S SDRRASR+EKTPPKY
Sbjct: 121 AKDSKDSDRSNRARERDSSRDSARSRDRESSSSRDSSSSDRRASRDEKTPPKY 173


>ref|YP_003774842.1| hypothetical protein Hsero_1418 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62934.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 176

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 145/176 (82%), Positives = 150/176 (85%), Gaps = 5/176 (2%)

Query: 23  MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ 82
           MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ
Sbjct: 1   MSASSSQARRLLANLALISAVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQ 60

Query: 83  SLEDCYQRNPDALKAGIFTGWKDMHEYMAAKGIQTVTPPAPAADAAKDDAKSKDG----- 137
           SLEDCYQRNPDALKAGIF GWKDMHEYMAAKGIQTVTPP P ADAAKDDAK KDG     
Sbjct: 61  SLEDCYQRNPDALKAGIFAGWKDMHEYMAAKGIQTVTPPTPPADAAKDDAKGKDGKDSKD 120

Query: 138 KDGKDKDAKDSDRSRARERDANRDNARSRDRESSSSSRDSGSDRRASREEKTPPKY 193
                        +RARERD++RD+ARSRDRESSSS   S SDRRASR+EKTPPKY
Sbjct: 121 AKDSKDSKDSDRSNRARERDSSRDSARSRDRESSSSRDSSSSDRRASRDEKTPPKY 176


>ref|YP_932515.1| hypothetical protein azo1011 [Azoarcus sp. BH72]
 emb|CAL93628.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 124

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 6/98 (6%)

Query: 32  RLLANLALISAVSFSL---SACDYISSF---SKPKQTPEEAKAEGIALGAGCRQAGQSLE 85
           R +    L+ A+ F+L   +AC+ +        PK+   +A AEG A+G+ CR AG+SLE
Sbjct: 2   RAIRRFPLLPAILFALPLLTACEQVGELLELPNPKKEAAQADAEGRAIGSACRHAGRSLE 61

Query: 86  DCYQRNPDALKAGIFTGWKDMHEYMAAKGIQTVTPPAP 123
           DCY  NP A KA +F GW+DM++YM    +  V    P
Sbjct: 62  DCYVLNPGAQKAAVFAGWRDMNDYMMEHKLDVVPSQLP 99


>ref|ZP_08503809.1| hypothetical protein METUNv1_00820 [Methyloversatilis universalis
           FAM5]
 gb|EGK72985.1| hypothetical protein METUNv1_00820 [Methyloversatilis universalis
           FAM5]
          Length = 126

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 3/105 (2%)

Query: 42  AVSFSLSACDYISSFSKPKQTPEEAKAEGIALGAGCRQAGQSLEDCYQRNPDALKAGIFT 101
           A + +L+ACD +     P +   + + +  A+G  CR AG++LEDCY  NP A KA IF 
Sbjct: 2   ACALTLAACDRLP-IPDPNKAAAQKELDAKAIGGACRHAGRALEDCYNLNPKASKAAIFA 60

Query: 102 GWKDMHEYMAAKGIQTVTP--PAPAADAAKDDAKSKDGKDGKDKD 144
           GW++M++YM    I+ V P  P PAA   K    S    D    D
Sbjct: 61  GWREMNDYMTQNKIEVVLPTVPPPAATTRKVKGPSAAEHDTAADD 105


>ref|ZP_03700246.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
 gb|EEG06846.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
          Length = 177

 Score = 64.7 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 72  ALGAGCRQAGQSLEDCYQRNPDALKAGIFTGWKDMHEYMAAKGIQTVTPP----APAADA 127
           A+GA CRQ+G+SLE+CYQRNPDA KA I+ GW++MHEYM  + + T+ PP    AP   A
Sbjct: 32  AVGAACRQSGRSLEECYQRNPDADKAQIYAGWREMHEYMVKQKLDTIAPPSDPVAPVTPA 91

Query: 128 A--KDDAKSKDGKDGKDKDAKDSDRSRARERDANRDNARSRDRESSSSSRDSG-SDRRAS 184
           A  K +A +    D         +  RA   D       +  R     ++ SG S +  S
Sbjct: 92  AAHKPEASAASVGDKPQAQLSPEEADRAMRNDPQVAAVLAAIRRGGLPAKASGNSAKDPS 151

Query: 185 REEK 188
            EEK
Sbjct: 152 GEEK 155