BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1219.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_787087.1| ABC transporter ATP-binding protein [Bordetella... 469 e-130 gb|EFV85204.1| ABC transporter [Achromobacter xylosoxidans C54] 460 e-127 gb|EGP48219.1| ABC transporter ATP-binding protein [Achromobacte... 457 e-127 ref|ZP_06688962.1| sulfate/thiosulfate ABC superfamily ATP bindi... 455 e-126 ref|ZP_08404615.1| ABC transporter [Hylemonella gracilis ATCC 19... 450 e-124 >ref|YP_787087.1| ABC transporter ATP-binding protein [Bordetella avium 197N] emb|CAJ50194.1| ABC transporter, ATP-binding protein [Bordetella avium 197N] Length = 273 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 238/273 (87%), Positives = 256/273 (93%), Gaps = 1/273 (0%) Query: 1 MSVVISPKI-DLPPETPFVLGPPGTHITIRGLTKYFAGWPLYENFDLDIPKQQIVSVFGP 59 MS VI+P I PP PFV GP GTHITIRGLTKYFAG PLYENFDL+IPK +IVSVFGP Sbjct: 1 MSTVINPVIWPEPPAAPFVPGPAGTHITIRGLTKYFAGAPLYENFDLNIPKGKIVSVFGP 60 Query: 60 NGCGKSTLINMIAGLIPIDAGEILFDGKSLAQTKIGYVFQNYRDAMFPWLRTIDNIAYPL 119 NGCGKSTLINMIAGLIPID GEILFDGKSLAQTKIGYVFQNYR+A+FPWLRTIDNIAYPL Sbjct: 61 NGCGKSTLINMIAGLIPIDRGEILFDGKSLAQTKIGYVFQNYREALFPWLRTIDNIAYPL 120 Query: 120 KLEGKSKAEIKRRVDELVASFDVKFDLMRYPYELSGGQQQTASIMRALAPGPEVLFLDEP 179 +LEG+SK E++RRV+ELVASFDVKFDL RYPYELSGGQQQTASIMRALAPGPEVLFLDEP Sbjct: 121 RLEGRSKTEVQRRVEELVASFDVKFDLNRYPYELSGGQQQTASIMRALAPGPEVLFLDEP 180 Query: 180 FSALDFEMTLFIREKLQQVFLQTGTTMVLVSHDLEEAVYLADQILLLTKRPTAVADILHY 239 FSALDFEMTLFIREKLQ+V++QTGTTM+LVSHDLEEAVYLAD+ILLLTKRPT VADIL Y Sbjct: 181 FSALDFEMTLFIREKLQEVYMQTGTTMLLVSHDLEEAVYLADEILLLTKRPTQVADILRY 240 Query: 240 QDPRPRTVETLSQPGFIAAKKLSMEIFQREVRK 272 +DPRPRTVETLS+P FIAAKKLS+EIFQREVRK Sbjct: 241 EDPRPRTVETLSEPSFIAAKKLSLEIFQREVRK 273 >gb|EFV85204.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 273 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 233/273 (85%), Positives = 250/273 (91%), Gaps = 1/273 (0%) Query: 1 MSVVISPKI-DLPPETPFVLGPPGTHITIRGLTKYFAGWPLYENFDLDIPKQQIVSVFGP 59 MS VI+P I P PF GP GTHITIRGLTKYFAGWPLYE+F+LDIPK +IVSVFGP Sbjct: 1 MSTVINPVIAPAPTPAPFRPGPAGTHITIRGLTKYFAGWPLYEDFNLDIPKGKIVSVFGP 60 Query: 60 NGCGKSTLINMIAGLIPIDAGEILFDGKSLAQTKIGYVFQNYRDAMFPWLRTIDNIAYPL 119 NGCGKSTLINMIAGLIPIDAGEILFDGKSLAQTKIGYVFQNYR+AMFPWLRTIDNIAYPL Sbjct: 61 NGCGKSTLINMIAGLIPIDAGEILFDGKSLAQTKIGYVFQNYREAMFPWLRTIDNIAYPL 120 Query: 120 KLEGKSKAEIKRRVDELVASFDVKFDLMRYPYELSGGQQQTASIMRALAPGPEVLFLDEP 179 +LEG+ KAE+ RV+ELVASFDVKFDL RYPYELSGGQQQTASIMRALAPGPEVLFLDEP Sbjct: 121 RLEGRGKAEVDARVEELVASFDVKFDLKRYPYELSGGQQQTASIMRALAPGPEVLFLDEP 180 Query: 180 FSALDFEMTLFIREKLQQVFLQTGTTMVLVSHDLEEAVYLADQILLLTKRPTAVADILHY 239 FSALDFEMTLFIREKLQ+VF+QTGTTM+LVSHDLEEAVYLADQ+LLLTKRPT VA+IL Y Sbjct: 181 FSALDFEMTLFIREKLQEVFMQTGTTMLLVSHDLEEAVYLADQVLLLTKRPTRVAEILDY 240 Query: 240 QDPRPRTVETLSQPGFIAAKKLSMEIFQREVRK 272 D RPRTVETLS+P FI KKLS+EIFQREVR+ Sbjct: 241 GDARPRTVETLSEPSFIGMKKLSLEIFQREVRR 273 >gb|EGP48219.1| ABC transporter ATP-binding protein [Achromobacter xylosoxidans AXX-A] Length = 273 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 224/253 (88%), Positives = 240/253 (94%) Query: 20 GPPGTHITIRGLTKYFAGWPLYENFDLDIPKQQIVSVFGPNGCGKSTLINMIAGLIPIDA 79 GP GTHITIRGLTKYFAGWPLYE+F+LDIPK +IVSVFGPNGCGKSTLINMIAGLIPIDA Sbjct: 21 GPAGTHITIRGLTKYFAGWPLYEDFNLDIPKGKIVSVFGPNGCGKSTLINMIAGLIPIDA 80 Query: 80 GEILFDGKSLAQTKIGYVFQNYRDAMFPWLRTIDNIAYPLKLEGKSKAEIKRRVDELVAS 139 GEILFDGKSLAQTKIGYVFQNYR+AMFPWLRTIDNIAYPL+LEG+ KAE+ RV+ELVAS Sbjct: 81 GEILFDGKSLAQTKIGYVFQNYREAMFPWLRTIDNIAYPLRLEGRGKAEVDARVEELVAS 140 Query: 140 FDVKFDLMRYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQQVF 199 FDVKFDL RYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQ+VF Sbjct: 141 FDVKFDLKRYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQEVF 200 Query: 200 LQTGTTMVLVSHDLEEAVYLADQILLLTKRPTAVADILHYQDPRPRTVETLSQPGFIAAK 259 +QTGTTM+LVSHDLEEAVYLADQ+LLLTKRPT VA+IL Y D RPRTVETLS+P FI K Sbjct: 201 MQTGTTMLLVSHDLEEAVYLADQVLLLTKRPTRVAEILDYGDARPRTVETLSEPSFIGMK 260 Query: 260 KLSMEIFQREVRK 272 KLS+EIFQREVR+ Sbjct: 261 KLSLEIFQREVRR 273 >ref|ZP_06688962.1| sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF74116.1| sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 273 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 225/250 (90%), Positives = 240/250 (96%) Query: 23 GTHITIRGLTKYFAGWPLYENFDLDIPKQQIVSVFGPNGCGKSTLINMIAGLIPIDAGEI 82 GTHITIRGLTKYFAGWPLYE+F+LDIPK +IVSVFGPNGCGKSTLINMIAGLIPIDAGEI Sbjct: 24 GTHITIRGLTKYFAGWPLYEDFNLDIPKGKIVSVFGPNGCGKSTLINMIAGLIPIDAGEI 83 Query: 83 LFDGKSLAQTKIGYVFQNYRDAMFPWLRTIDNIAYPLKLEGKSKAEIKRRVDELVASFDV 142 LFDGKSLAQTKIGYVFQNYR+AMFPWLRTIDNIAYPL+LEG+SKAE+ RV+ELVASFDV Sbjct: 84 LFDGKSLAQTKIGYVFQNYREAMFPWLRTIDNIAYPLRLEGRSKAEVDARVEELVASFDV 143 Query: 143 KFDLMRYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQQVFLQT 202 KFDL RYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQ+VFLQT Sbjct: 144 KFDLKRYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSALDFEMTLFIREKLQEVFLQT 203 Query: 203 GTTMVLVSHDLEEAVYLADQILLLTKRPTAVADILHYQDPRPRTVETLSQPGFIAAKKLS 262 GTTM+LVSHDLEEAVYLADQ+LLLTKRPT VA+IL Y DPRPRTVETLS+P FI KKLS Sbjct: 204 GTTMLLVSHDLEEAVYLADQVLLLTKRPTRVAEILDYTDPRPRTVETLSEPSFIQMKKLS 263 Query: 263 MEIFQREVRK 272 +EIFQREVR+ Sbjct: 264 LEIFQREVRR 273 >ref|ZP_08404615.1| ABC transporter [Hylemonella gracilis ATCC 19624] gb|EGI78293.1| ABC transporter [Hylemonella gracilis ATCC 19624] Length = 307 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 224/270 (82%), Positives = 244/270 (90%) Query: 3 VVISPKIDLPPETPFVLGPPGTHITIRGLTKYFAGWPLYENFDLDIPKQQIVSVFGPNGC 62 V+ +P + P PF GP GTHITIR LTKYFAGWPLYENFDLDIPK +IVSVFGPNGC Sbjct: 38 VLNAPVVADVPLAPFRPGPAGTHITIRSLTKYFAGWPLYENFDLDIPKGKIVSVFGPNGC 97 Query: 63 GKSTLINMIAGLIPIDAGEILFDGKSLAQTKIGYVFQNYRDAMFPWLRTIDNIAYPLKLE 122 GKSTLINMIAGL+PID+GEILFDGKSL TKIGYVFQNYR+AMFPW+RTIDNIAYPLKLE Sbjct: 98 GKSTLINMIAGLVPIDSGEILFDGKSLQDTKIGYVFQNYREAMFPWMRTIDNIAYPLKLE 157 Query: 123 GKSKAEIKRRVDELVASFDVKFDLMRYPYELSGGQQQTASIMRALAPGPEVLFLDEPFSA 182 G+SKAE+ RR+ ELVASFDVKFDL RYPYELSGGQQQTASIMRALAP PEVLFLDEPFSA Sbjct: 158 GQSKAEVDRRMAELVASFDVKFDLNRYPYELSGGQQQTASIMRALAPKPEVLFLDEPFSA 217 Query: 183 LDFEMTLFIREKLQQVFLQTGTTMVLVSHDLEEAVYLADQILLLTKRPTAVADILHYQDP 242 LDFEMTLFIREKLQ+VF+QTGTTM+LVSHDLEEAVYLADQ+LLLTKRPT VA+IL Y D Sbjct: 218 LDFEMTLFIREKLQEVFMQTGTTMLLVSHDLEEAVYLADQVLLLTKRPTRVAEILPYDDA 277 Query: 243 RPRTVETLSQPGFIAAKKLSMEIFQREVRK 272 RPRTVETLS+ F+A KK S+EIFQREVR+ Sbjct: 278 RPRTVETLSEASFVATKKKSLEIFQREVRR 307