BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1218.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774836.1| ABC transporter periplasmic/surface lipoprot... 702 0.0 gb|EGH57704.1| bmp family protein [Pseudomonas syringae pv. macu... 556 e-156 ref|ZP_07262701.1| twin-arginine translocation pathway signal [P... 544 e-152 gb|EGH69215.1| twin-arginine translocation pathway signal [Pseud... 543 e-152 ref|YP_234261.1| twin-arginine translocation pathway signal [Pse... 543 e-152 >ref|YP_003774836.1| ABC transporter periplasmic/surface lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ62928.1| ABC-type transport system, periplasmic component/surface lipoprotein protein [Herbaspirillum seropedicae SmR1] Length = 365 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 358/365 (98%), Positives = 364/365 (99%) Query: 1 MQNRRDFLKLSGAAALGAAFPLELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAIIKKMP 60 M+NRRDFLKLSGAAALGAAFPLELLAAGPLTVGFIYVGARDDFGYNQSHAQAAA+IKKMP Sbjct: 1 MKNRRDFLKLSGAAALGAAFPLELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAVIKKMP 60 Query: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG Sbjct: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 Query: 121 GLWTAGKHPMNVGSFFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 GLWTAGKHPMNVGS+FGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG Sbjct: 121 GLWTAGKHPMNVGSYFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 Query: 181 AQSVDPSITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMT 240 AQSVDP+ITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRG+MT Sbjct: 181 AQSVDPAITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGVMT 240 Query: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGA 300 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKD+FVKMSPYGA Sbjct: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDNFVKMSPYGA 300 Query: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAG 360 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDV LEKMNYLVAG Sbjct: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVVLEKMNYLVAG 360 Query: 361 VVGQV 365 VVGQV Sbjct: 361 VVGQV 365 >gb|EGH57704.1| bmp family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 369 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 273/365 (74%), Positives = 308/365 (84%), Gaps = 2/365 (0%) Query: 3 NRRDFLKLSGAAALGAAFPL--ELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAIIKKMP 60 +RR F+KL+G L AA P A PL VGFIYVGARDDFGYNQ+HA+AAAIIK +P Sbjct: 5 DRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHARAAAIIKTLP 64 Query: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 VKVIEEE VPETVAVQKTMEAMI+QDGATL+FPTSFGYF+PHV+K+A+KYP VR AHCG Sbjct: 65 NVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPDVRFAHCG 124 Query: 121 GLWTAGKHPMNVGSFFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 GLW GK PMN GSFFGYI+E +YL+GV+AG+MSKSKKL F+AAKP+PQVLRN+NAF +G Sbjct: 125 GLWQQGKDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNAFAMG 184 Query: 181 AQSVDPSITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMT 240 A+SVDPSI VIFTGDWSLPVKEAEAAN LIDQGCDV+TCHVDGPKVIVETAEKRG+MT Sbjct: 185 ARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKRGVMT 244 Query: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGA 300 GYHASQA+LAPKGYLTGAEWNW TPY V A G PMINFLRGGLK+ FVK S YG Sbjct: 245 CGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGP 304 Query: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAG 360 AV+A AK++AD IKA+MLAG+F IFKGP+KDNKG VI G Q QTD+ALE MNYLV G Sbjct: 305 AVTAAAKQQADAIKARMLAGQFVIFKGPLKDNKGAVVIADGVAQTQTDIALESMNYLVEG 364 Query: 361 VVGQV 365 V+GQ+ Sbjct: 365 VLGQL 369 >ref|ZP_07262701.1| twin-arginine translocation pathway signal [Pseudomonas syringae pv. syringae 642] Length = 369 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 274/365 (75%), Positives = 309/365 (84%), Gaps = 2/365 (0%) Query: 3 NRRDFLKLSGAAALGAAFPL--ELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAIIKKMP 60 +RR F+KL+G L AA P A PL VGFIYVGARDDFGYNQ+HAQAAAIIK +P Sbjct: 5 DRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLP 64 Query: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 VKVIEEE VPETVAVQKTMEAMI+QDGATL+FPTSFGYF+PHV+K+A+KYP VR AHCG Sbjct: 65 NVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPDVRFAHCG 124 Query: 121 GLWTAGKHPMNVGSFFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 GLW G+ PMN GSFFGYI+E +YL+GV+AG+MSKSKKL F+AAKP+PQVLRN+NAF +G Sbjct: 125 GLWQEGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNAFAMG 184 Query: 181 AQSVDPSITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMT 240 A+SVDPSI VIFTGDWSLPVKEAEAAN LIDQGCDV+TCHVDGPKVIVETAEKRG+MT Sbjct: 185 ARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKRGVMT 244 Query: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGA 300 GYHASQA+LAPKGYLTGAEWNW TPY V A G PMINFLRGGLK+ FVK S YG Sbjct: 245 CGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGP 304 Query: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAG 360 AV+A A++KAD IKAQM+AG+F IFKGP+KDNKGN VI G Q QTD+ALE MNYLV G Sbjct: 305 AVTADARQKADAIKAQMMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEG 364 Query: 361 VVGQV 365 V+GQ+ Sbjct: 365 VLGQL 369 >gb|EGH69215.1| twin-arginine translocation pathway signal [Pseudomonas syringae pv. aceris str. M302273PT] gb|EGH75877.1| twin-arginine translocation pathway signal [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 369 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 274/365 (75%), Positives = 309/365 (84%), Gaps = 2/365 (0%) Query: 3 NRRDFLKLSGAAALGAAFPL--ELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAIIKKMP 60 +RR F+KL+G L AA P A PL VGFIYVGARDDFGYNQ+HAQAAAIIK +P Sbjct: 5 DRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLP 64 Query: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 VKVIEEE VPETVAVQKTMEAMI+QDGATL+FPTSFGYF+PHV+K+A+KYP VR AHCG Sbjct: 65 NVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPDVRFAHCG 124 Query: 121 GLWTAGKHPMNVGSFFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 GLW G+ PMN GSFFGYI+E +YL+GV+AG+MSKSKKL F+AAKP+PQVLRN+NAF +G Sbjct: 125 GLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNAFAMG 184 Query: 181 AQSVDPSITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMT 240 A+SVDPSI VIFTGDWSLPVKEAEAAN LIDQGCDV+TCHVDGPKVIVETAEKRG+MT Sbjct: 185 ARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKRGVMT 244 Query: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGA 300 GYHASQA+LAPKGYLTGAEWNW TPY V A G PMINFLRGGLK+ FVK S YG Sbjct: 245 CGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGP 304 Query: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAG 360 AV+A A++KAD IKAQM+AG+F IFKGP+KDNKGN VI G Q QTD+ALE MNYLV G Sbjct: 305 AVTADARQKADAIKAQMMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEG 364 Query: 361 VVGQV 365 V+GQ+ Sbjct: 365 VLGQL 369 >ref|YP_234261.1| twin-arginine translocation pathway signal [Pseudomonas syringae pv. syringae B728a] gb|AAY36223.1| nucleoside-binding protein [Pseudomonas syringae pv. syringae B728a] Length = 369 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 275/365 (75%), Positives = 310/365 (84%), Gaps = 2/365 (0%) Query: 3 NRRDFLKLSGAAALGAAFPL--ELLAAGPLTVGFIYVGARDDFGYNQSHAQAAAIIKKMP 60 +RR F+KL+G L AA P A PL VGFIYVGARDDFGYNQ+HAQAAAIIK +P Sbjct: 5 DRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLP 64 Query: 61 GVKVIEEEKVPETVAVQKTMEAMIQQDGATLLFPTSFGYFDPHVLKIAEKYPKVRIAHCG 120 VKVIEEE VPETVAVQKTMEAMI+QDGATL+FPTSFGYF+PHV+K+A+KYP+VR AHCG Sbjct: 65 NVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRFAHCG 124 Query: 121 GLWTAGKHPMNVGSFFGYIEECEYLSGVVAGYMSKSKKLAFIAAKPIPQVLRNINAFTLG 180 GLW G+ PMN GSFFGYI+E +YL+GV+AG+MSKSKKL F+AAKP+PQVLRN+NAF +G Sbjct: 125 GLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNAFAMG 184 Query: 181 AQSVDPSITCHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMT 240 A+SVDPSI VIFTGDWSLPVKEAEAAN LIDQGCDV+TCHVDGPKVIVETAEKRG+MT Sbjct: 185 ARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKRGVMT 244 Query: 241 TGYHASQASLAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGA 300 GYHASQA+LAPKGYLTGAEWNW TPY V A G PMINFLRGGLK+ FVK S YG Sbjct: 245 CGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGP 304 Query: 301 AVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAG 360 AV+A AK+KAD IKAQM+AG+F IFKGP+KDNKGN VI G Q QTD+ALE MNYLV G Sbjct: 305 AVTADAKQKADAIKAQMMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEG 364 Query: 361 VVGQV 365 V+GQ+ Sbjct: 365 VLGQL 369