BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1214.p (522 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774833.1| ABC transporter ATPase [Herbaspirillum serop... 873 0.0 ref|ZP_03266231.1| ABC transporter related [Burkholderia sp. H16... 613 e-173 ref|ZP_06838924.1| ABC transporter related protein [Burkholderia... 602 e-170 ref|YP_553942.1| ABC transporter duplicated ATPase subunits [Bur... 600 e-169 ref|YP_001888968.1| ABC transporter-like protein [Burkholderia p... 594 e-167 >ref|YP_003774833.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62925.1| ABC-type uncharacterized transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 522 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 483/522 (92%), Positives = 500/522 (95%) Query: 1 MHALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQG 60 MHALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQG Sbjct: 1 MHALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQG 60 Query: 61 SIVADRREVEIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWRSERTV 120 SI+ADRREV+IRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRW SER V Sbjct: 61 SILADRREVDIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWSSERAV 120 Query: 121 LEEFMARMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVL 180 LEEFMA+MPFKL ER VSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVL Sbjct: 121 LEEFMAKMPFKLSPERTVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVL 180 Query: 181 GLMHALTRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMGH 240 GLMHALTRQQELTVLMITHKFHEV+AYADDVTVLRKGRLVGSARV+ET+PD LAHWMMG Sbjct: 181 GLMHALTRQQELTVLMITHKFHEVSAYADDVTVLRKGRLVGSARVAETSPDMLAHWMMGQ 240 Query: 241 ARAEKTQVERPAVPADARFGLEVTELTVNNDRGVAAVRALSLQVKRGEIVGLAGISGNGQ 300 ARAEK QV RPAVP A GLEV +LTVNNDRGVAAVRALSLQV+RGEIVGLAGISGNGQ Sbjct: 241 ARAEKAQVARPAVPVQASVGLEVRDLTVNNDRGVAAVRALSLQVRRGEIVGLAGISGNGQ 300 Query: 301 KELVEALLGQRRHLLGEIRIEDAPYAATREEMRRLRVFALPEEPLRNACIAGMSVAENMA 360 KELVEALLGQRR LLGEIR+E APYAATREEMRRLRVFALPEEPLRNACIAGMSVAENMA Sbjct: 301 KELVEALLGQRRLLLGEIRVEGAPYAATREEMRRLRVFALPEEPLRNACIAGMSVAENMA 360 Query: 361 LRNFDVAPFKRSGWRVNRSAMKRQAQSLIAAFNVKPPAPERPIGTLSGGNVQRAVLAREL 420 LRNFDVAPFKR GWR++RSAMKRQAQ+LI+AFNVKPP PERPIGTLSGGNVQRAVLAREL Sbjct: 361 LRNFDVAPFKRGGWRIDRSAMKRQAQALISAFNVKPPVPERPIGTLSGGNVQRAVLAREL 420 Query: 421 GEEGDAGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDELLELSDRI 480 GE+G GAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDELLELSDRI Sbjct: 421 GEDGQDGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDELLELSDRI 480 Query: 481 LVMTEGRIVQVAQDVATQGADRAALGRWMAGHSEQSTHAEAA 522 LVMTEGRIV VAQDVA +GADRAALGRWMAGH++QSTHAEAA Sbjct: 481 LVMTEGRIVHVAQDVAKEGADRAALGRWMAGHAQQSTHAEAA 522 >ref|ZP_03266231.1| ABC transporter related [Burkholderia sp. H160] gb|EEA02170.1| ABC transporter related [Burkholderia sp. H160] Length = 537 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 349/525 (66%), Positives = 408/525 (77%), Gaps = 21/525 (4%) Query: 3 ALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGSI 62 AL +E+I A KSFGSFRALD+VS+++ GT+HALLGENGAGKSTLVKGLVGY LD G+I Sbjct: 7 ALGVEVIGASKSFGSFRALDDVSIRVAPGTVHALLGENGAGKSTLVKGLVGYGLLDHGTI 66 Query: 63 VADRREVEIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWRSERTVLE 122 VAD REV I + R LGIGMVYQHFTLA L+VAENLLLARG+L W+I W +ER L+ Sbjct: 67 VADGREVHIATPRDAQALGIGMVYQHFTLAAGLSVAENLLLARGNLSWKIDWAAERKALD 126 Query: 123 EFMARMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVLGL 182 FM RMPF L L+ VSSL+AGEKQKLEILKQLYL +RFLILDEPTSVLTPQEADEVLGL Sbjct: 127 AFMRRMPFHLELDAPVSSLAAGEKQKLEILKQLYLEQRFLILDEPTSVLTPQEADEVLGL 186 Query: 183 MHALTRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMGHAR 242 M L + +LTVLMITHKF EV AY+D+VTVLRKGR VG+ V++T D LA WMMG Sbjct: 187 MRTLASRGDLTVLMITHKFREVMAYSDNVTVLRKGRFVGTCAVADTDRDRLAAWMMGSDA 246 Query: 243 AEKTQ------------VERPAVPADARFGLEVTELTVNNDRGVAAVRALSLQVKRGEIV 290 + +T+ RP P DA L ++ L+V ++RG AAVR SL V+ GEI+ Sbjct: 247 SAQTREGAAEVTDEFRLARRPHSP-DAPVRLSLSSLSVVDERGHAAVREASLSVRAGEIL 305 Query: 291 GLAGISGNGQKELVEALLGQRRHLLGEIRIEDAPYAATREEMRRLRVFALPEEPLRNACI 350 GLAG+SGNGQKEL+EAL+GQR+ G + +E +PYAATR EM R+RVFALPEEPLRNAC+ Sbjct: 306 GLAGVSGNGQKELIEALVGQRKVQSGAMAVEGSPYAATRMEMTRMRVFALPEEPLRNACV 365 Query: 351 AGMSVAENMALRNFDVAPFKRSGWRVNRSAMKRQAQSLIAAFNVKPPAPERPIGTLSGGN 410 AGMSVAENMALR+FD AP +R GW ++R AM+ +A+ LIA FNV+PP PER IGTLSGGN Sbjct: 366 AGMSVAENMALRDFDRAPLRRGGWWLDRRAMRSRAERLIAEFNVRPPLPERAIGTLSGGN 425 Query: 411 VQRAVLARELGEEGDAGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDL 470 +QRAVLARELG A NVLIVANPVFGLDFASVADIHAR+L AR GAAVLLVSEDL Sbjct: 426 IQRAVLARELGH-----AVNVLIVANPVFGLDFASVADIHARILAARDAGAAVLLVSEDL 480 Query: 471 DELLELSDRILVMTEGRIVQVAQDVATQGADRAALGRWMAGHSEQ 515 DELLEL+DRI+VM EGR+V + A ADR LGR MAGH ++ Sbjct: 481 DELLELADRIVVMAEGRLV---YETAASEADRVVLGRHMAGHGDE 522 Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 105/246 (42%), Gaps = 18/246 (7%) Query: 20 ALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGSIVADRREVEIRSARVPNQ 79 A+ E SL +RAG I L G +G G+ L++ LVG + G++ + + Sbjct: 291 AVREASLSVRAGEILGLAGVSGNGQKELIEALVGQRKVQSGAMAVEGSPYAATRMEMTRM 350 Query: 80 LGIGMVYQHFTLA--PSLTVAENLLLARGD-LPWR----------IRWRSERTVLEEFMA 126 + + A ++VAEN+ L D P R +R R+ER ++ EF Sbjct: 351 RVFALPEEPLRNACVAGMSVAENMALRDFDRAPLRRGGWWLDRRAMRSRAER-LIAEFNV 409 Query: 127 RMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVLGLMHAL 186 R P ERA+ +LS G Q+ + ++L LI+ P L ++ + A Sbjct: 410 RPPLP---ERAIGTLSGGNIQRAVLARELGHAVNVLIVANPVFGLDFASVADIHARILA- 465 Query: 187 TRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMGHARAEKT 246 R VL+++ E+ AD + V+ +GRLV SE L M GH + Sbjct: 466 ARDAGAAVLLVSEDLDELLELADRIVVMAEGRLVYETAASEADRVVLGRHMAGHGDEGRP 525 Query: 247 QVERPA 252 Q PA Sbjct: 526 QTAEPA 531 >ref|ZP_06838924.1| ABC transporter related protein [Burkholderia sp. Ch1-1] gb|EFG73370.1| ABC transporter related protein [Burkholderia sp. Ch1-1] Length = 537 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 341/531 (64%), Positives = 406/531 (76%), Gaps = 18/531 (3%) Query: 2 HALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGS 61 AL +E++NA KSFG+FRALD VS+K++AGTIHALLGENGAGKSTLVKGLVGY LD G Sbjct: 7 QALGVEVLNASKSFGAFRALDGVSIKVKAGTIHALLGENGAGKSTLVKGLVGYGVLDDGQ 66 Query: 62 IVADRREVEIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWRSERTVL 121 I AD REV I S R LGIGMVYQHFTLA L+V ENLLLARG +PW+I W++ER L Sbjct: 67 IAADGREVHIHSPRDAQALGIGMVYQHFTLAAGLSVEENLLLARGQMPWKIAWKAERAAL 126 Query: 122 EEFMARMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVLG 181 FM RMPF+L L+ V+ L+AGEKQKLEILKQLYL++RFLILDEPTSVLTPQEADEVLG Sbjct: 127 AAFMQRMPFRLPLDAPVAGLAAGEKQKLEILKQLYLQQRFLILDEPTSVLTPQEADEVLG 186 Query: 182 LMHALTRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMG-- 239 LM LT + ELTVLMITHKF EV AYADDVTVLRKGR VG++ V+ TT D LA WMMG Sbjct: 187 LMRDLTTRGELTVLMITHKFREVMAYADDVTVLRKGRQVGTSAVANTTRDELAAWMMGTV 246 Query: 240 -------HARAEKTQVERPAVPADARFGLEVTELTVNNDRGVAAVRALSLQVKRGEIVGL 292 A + +V+R V A+ L + +++V +DRG AV+ +L V+ GEI+GL Sbjct: 247 ATGDAPVMAAVTEERVQRKPVDESAQVRLALRDVSVEDDRGHTAVKHATLSVRAGEILGL 306 Query: 293 AGISGNGQKELVEALLGQRRHLLGEIRIEDAPYAATREEMRRLRVFALPEEPLRNACIAG 352 AG+SGNGQKELVEAL+GQRR G++++ PY ATRE+M + RVFA+PEEPL+NAC+ G Sbjct: 307 AGVSGNGQKELVEALVGQRRVKTGDMQVAGRPYHATREQMTQRRVFAIPEEPLKNACVGG 366 Query: 353 MSVAENMALRNFDVAPFKRSGWRVNRSAMKRQAQSLIAAFNVKPPAPERPIGTLSGGNVQ 412 MSVA+N+ALR+FD P +R GW ++R AM+ +A LI FNV+PP PER IGTLSGGNVQ Sbjct: 367 MSVAQNLALRDFDREPLRRGGWWLDRRAMRERAAQLIGEFNVRPPVPERAIGTLSGGNVQ 426 Query: 413 RAVLARELGEEGDAGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDE 472 RAVLARELG+ D VLIVANPVFGLDFASVADIHARL+ AR GAAVLLVSEDLDE Sbjct: 427 RAVLARELGQPVD-----VLIVANPVFGLDFASVADIHARLMAARDAGAAVLLVSEDLDE 481 Query: 473 LLELSDRILVMTEGRIVQVAQDVATQGADRAALGRWMAGHSEQST-HAEAA 522 LLEL+DRI+V+ EG +V + ADR LG+ MAGH + +T HA A Sbjct: 482 LLELADRIMVIAEGELV---FETPAARADRTVLGQHMAGHGDTATPHAAPA 529 >ref|YP_553942.1| ABC transporter duplicated ATPase subunits [Burkholderia xenovorans LB400] gb|ABE34592.1| nucleoside ABC transporter ATP-binding protein [Burkholderia xenovorans LB400] Length = 537 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 339/531 (63%), Positives = 404/531 (76%), Gaps = 18/531 (3%) Query: 2 HALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGS 61 AL +E++NA KSFG+FRALD VS+K++AGTIHALLGENGAGKSTLVKGLVGY LD G Sbjct: 7 QALGVEVLNASKSFGAFRALDGVSIKVKAGTIHALLGENGAGKSTLVKGLVGYGVLDDGQ 66 Query: 62 IVADRREVEIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWRSERTVL 121 I AD REV I S R LGIGMVYQHFTLA L+V ENLLLARG +PW+I W++ER L Sbjct: 67 IAADGREVHIHSPRDAQALGIGMVYQHFTLAAGLSVEENLLLARGQMPWKIDWKAERAAL 126 Query: 122 EEFMARMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVLG 181 FM RMPF+L L+ V+ L+AGEKQKLEILKQLYL++RFLILDEPTSVLTPQEADEVLG Sbjct: 127 AAFMQRMPFRLPLDAPVAGLAAGEKQKLEILKQLYLQQRFLILDEPTSVLTPQEADEVLG 186 Query: 182 LMHALTRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMG-- 239 LM LT + ELTVLMITHKF EV AYADDVTVLRKGR VG++ V+ TT D LA WMMG Sbjct: 187 LMRDLTTRGELTVLMITHKFREVMAYADDVTVLRKGRQVGTSAVANTTRDELAAWMMGTV 246 Query: 240 -------HARAEKTQVERPAVPADARFGLEVTELTVNNDRGVAAVRALSLQVKRGEIVGL 292 A + +V+R V A+ L + +++V +DRG AV+ +L V+ GEI+GL Sbjct: 247 ATGDAPVMAAVTEARVQRKPVDESAQVRLALRDVSVEDDRGHTAVKHATLSVRAGEILGL 306 Query: 293 AGISGNGQKELVEALLGQRRHLLGEIRIEDAPYAATREEMRRLRVFALPEEPLRNACIAG 352 AG+SGNGQKELVEAL+GQRR G++++ PY ATRE+M + RVFA+PEEPL+NAC+ Sbjct: 307 AGVSGNGQKELVEALVGQRRVKTGDMQVAGKPYHATREQMTQRRVFAIPEEPLKNACVGA 366 Query: 353 MSVAENMALRNFDVAPFKRSGWRVNRSAMKRQAQSLIAAFNVKPPAPERPIGTLSGGNVQ 412 MSVA+N+ALR+FD P +R GW ++R AM+ +A LI FNV+PP PER IGTLSGGNVQ Sbjct: 367 MSVAQNLALRDFDREPLRRGGWWLDRRAMRERAAQLIGEFNVRPPVPERAIGTLSGGNVQ 426 Query: 413 RAVLARELGEEGDAGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDE 472 RAVLARELG+ D VLIVANPVFGLDFASVADIHARL+ AR GAAVLLVSEDLDE Sbjct: 427 RAVLARELGQPVD-----VLIVANPVFGLDFASVADIHARLMAARDAGAAVLLVSEDLDE 481 Query: 473 LLELSDRILVMTEGRIVQVAQDVATQGADRAALGRWMAGHSEQST-HAEAA 522 LLEL+DRI+V+ EG +V + ADR LG+ MAGH + + HA A Sbjct: 482 LLELADRIMVIAEGELV---FETPAARADRTVLGQHMAGHGDTAAPHAAPA 529 >ref|YP_001888968.1| ABC transporter-like protein [Burkholderia phytofirmans PsJN] gb|ACD19598.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 536 Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats. Identities = 334/529 (63%), Positives = 404/529 (76%), Gaps = 17/529 (3%) Query: 2 HALELEIINAGKSFGSFRALDEVSLKIRAGTIHALLGENGAGKSTLVKGLVGYSPLDQGS 61 AL +E+++A KSFG+FRALD+VS+K++AGTIHALLGENGAGKSTLVKGLVGY LD G Sbjct: 6 QALGVEVMHASKSFGAFRALDDVSIKVKAGTIHALLGENGAGKSTLVKGLVGYGVLDDGQ 65 Query: 62 IVADRREVEIRSARVPNQLGIGMVYQHFTLAPSLTVAENLLLARGDLPWRIRWRSERTVL 121 I AD REV I S R LGIGMVYQHFTLA L+V ENLLLARG +PW+I W++ER L Sbjct: 66 IAADGREVLIHSPRDAQALGIGMVYQHFTLASGLSVEENLLLARGQMPWKIDWKTERAAL 125 Query: 122 EEFMARMPFKLGLERAVSSLSAGEKQKLEILKQLYLRRRFLILDEPTSVLTPQEADEVLG 181 FM RMPF+L L+ V++L+AGEKQKLEILKQLYL++RFLILDEPTSVLTPQEADEVLG Sbjct: 126 LAFMQRMPFRLPLDAPVAALAAGEKQKLEILKQLYLQQRFLILDEPTSVLTPQEADEVLG 185 Query: 182 LMHALTRQQELTVLMITHKFHEVTAYADDVTVLRKGRLVGSARVSETTPDALAHWMMG-- 239 LM LT + ELTVLMITHKF EV AYADDVTVLRKGR VG++ V+ T+ D LA WMMG Sbjct: 186 LMRELTTRGELTVLMITHKFREVMAYADDVTVLRKGRQVGTSAVANTSRDELAAWMMGTV 245 Query: 240 -------HARAEKTQVERPAVPADARFGLEVTELTVNNDRGVAAVRALSLQVKRGEIVGL 292 A + +V+R + A+ L + +++V +DRG AV+ +L V+ GEI+GL Sbjct: 246 ATSDAPVMAAVIEERVQRKPLAESAQVRLALRDVSVEDDRGHMAVKHATLSVRAGEILGL 305 Query: 293 AGISGNGQKELVEALLGQRRHLLGEIRIEDAPYAATREEMRRLRVFALPEEPLRNACIAG 352 AG+SGNGQKELVEAL+GQRR G++++ PY ATRE+M + R+FA+PEEPL+NAC+ Sbjct: 306 AGVSGNGQKELVEALVGQRRVKTGDMQVAGKPYQATREQMTQRRLFAIPEEPLKNACVGA 365 Query: 353 MSVAENMALRNFDVAPFKRSGWRVNRSAMKRQAQSLIAAFNVKPPAPERPIGTLSGGNVQ 412 MSVA+N+ALR+FD P +R GW ++R AM+ +A LI FNV+PP PER IGTLSGGNVQ Sbjct: 366 MSVAQNLALRDFDREPLRRGGWWLDRRAMRARATQLIGEFNVRPPVPERAIGTLSGGNVQ 425 Query: 413 RAVLARELGEEGDAGAANVLIVANPVFGLDFASVADIHARLLQARARGAAVLLVSEDLDE 472 RAVLARELG+ D VLIVANPVFGLDFASVADIHARL+ AR GAAVLLVSEDLDE Sbjct: 426 RAVLARELGQPVD-----VLIVANPVFGLDFASVADIHARLMAARDAGAAVLLVSEDLDE 480 Query: 473 LLELSDRILVMTEGRIVQVAQDVATQGADRAALGRWMAGHSEQSTHAEA 521 LLEL+DRI+V+ EG +V + ADR LG+ MAGH + T A Sbjct: 481 LLELADRIMVIAEGELV---YETPAARADRTVLGQHMAGHGDTPTQPAA 526