BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1213.p (227 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774832.1| isochorismatase family protein [Herbaspirill... 428 e-118 ref|YP_553941.1| isochorismatase family protein [Burkholderia xe... 309 2e-82 ref|YP_001888967.1| isochorismatase hydrolase [Burkholderia phyt... 305 3e-81 ref|ZP_06838925.1| isochorismatase hydrolase [Burkholderia sp. C... 304 7e-81 ref|YP_477042.1| isochorismatase family protein [Synechococcus s... 296 1e-78 >ref|YP_003774832.1| isochorismatase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62924.1| isochorismatase family protein [Herbaspirillum seropedicae SmR1] Length = 227 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 214/227 (94%), Positives = 216/227 (95%) Query: 1 MIRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLTLA 60 MIRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALL LA Sbjct: 1 MIRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLALA 60 Query: 61 RAHQMLVVHTRESHLPDLSDCPRAKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLAP 120 R QMLVVHTRESHLPDLSDCPR KRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQL P Sbjct: 61 RQTQMLVVHTRESHLPDLSDCPRTKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLTP 120 Query: 121 LDGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVV 180 + GEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVV Sbjct: 121 MAGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVV 180 Query: 181 EDACASYFPEFHRATLEMLTAQGGIVGWRAPLAQLHSAVAAYTGETP 227 EDACASYFP FHRATL+MLTAQGGIVGWRAPLAQL SAV AY GE P Sbjct: 181 EDACASYFPAFHRATLDMLTAQGGIVGWRAPLAQLQSAVTAYAGEHP 227 >ref|YP_553941.1| isochorismatase family protein [Burkholderia xenovorans LB400] gb|ABE34591.1| Isochorismatase family protein [Burkholderia xenovorans LB400] Length = 231 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 156/215 (72%), Positives = 173/215 (80%) Query: 1 MIRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLTLA 60 ++ IDA P P+ F P TALVVIDMQRDF+E GGFG +LGNDV L IVPTVAALL A Sbjct: 6 LLTIDAQPGPFSFDPAKTALVVIDMQRDFIEPGGFGESLGNDVSLLAEIVPTVAALLAFA 65 Query: 61 RAHQMLVVHTRESHLPDLSDCPRAKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLAP 120 R HQ LVVHTRESH DLSDCP AKRLRG P IGD GPMGRILVRGEPGN I+ LAP Sbjct: 66 RQHQWLVVHTRESHAADLSDCPPAKRLRGAPNARIGDAGPMGRILVRGEPGNAIIEPLAP 125 Query: 121 LDGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVV 180 L GE+VIDKPGKGAFYAT L +L RGITHL+ AGVTTEVCVQTSMREANDRGY+ L++ Sbjct: 126 LAGELVIDKPGKGAFYATRLGEELAMRGITHLVFAGVTTEVCVQTSMREANDRGYDSLLI 185 Query: 181 EDACASYFPEFHRATLEMLTAQGGIVGWRAPLAQL 215 EDA ASYFP F +ATL+M+ +QGGIVGW APL+ L Sbjct: 186 EDATASYFPAFKQATLDMVRSQGGIVGWTAPLSSL 220 >ref|YP_001888967.1| isochorismatase hydrolase [Burkholderia phytofirmans PsJN] gb|ACD19597.1| isochorismatase hydrolase [Burkholderia phytofirmans PsJN] Length = 231 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 152/214 (71%), Positives = 169/214 (78%) Query: 2 IRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLTLAR 61 + IDA P P+ F TALVVIDMQRDF+E GGFG +LGNDV L IVPTVAALL AR Sbjct: 7 LTIDAQPGPFSFDSAKTALVVIDMQRDFIEPGGFGESLGNDVSLLADIVPTVAALLAFAR 66 Query: 62 AHQMLVVHTRESHLPDLSDCPRAKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLAPL 121 H VVHTRESH PDLSDCP AKRLRG P IGD GPMGRIL+RGEPGN I+ LAPL Sbjct: 67 KHHWFVVHTRESHAPDLSDCPPAKRLRGAPNARIGDAGPMGRILIRGEPGNAIVEPLAPL 126 Query: 122 DGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVVE 181 GE+VIDKPGKGAF+AT L +L RG+THL+ AGVTTEVCVQTSMREANDRGY+ L++E Sbjct: 127 AGELVIDKPGKGAFHATRLGEELAMRGVTHLVFAGVTTEVCVQTSMREANDRGYDSLLIE 186 Query: 182 DACASYFPEFHRATLEMLTAQGGIVGWRAPLAQL 215 DA ASYFP F +ATLEM+ +QGGIVGW AP A L Sbjct: 187 DATASYFPAFKQATLEMVRSQGGIVGWTAPFASL 220 >ref|ZP_06838925.1| isochorismatase hydrolase [Burkholderia sp. Ch1-1] gb|EFG73371.1| isochorismatase hydrolase [Burkholderia sp. Ch1-1] Length = 231 Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 154/215 (71%), Positives = 170/215 (79%) Query: 1 MIRIDAFPYPYQFHPRSTALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLTLA 60 ++ I A P P+ F P TALVVIDMQRDF+E GGFG +LGNDV L IVPTVAALL A Sbjct: 6 LLSIAAQPGPFSFDPAKTALVVIDMQRDFIEPGGFGESLGNDVSLLAEIVPTVAALLAFA 65 Query: 61 RAHQMLVVHTRESHLPDLSDCPRAKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLAP 120 R H LVVHTRESH DLSDCP AKRLRG P IGD GPMGRILVRGEPGN I+ L P Sbjct: 66 RQHHWLVVHTRESHAADLSDCPPAKRLRGAPNARIGDAGPMGRILVRGEPGNAIIEPLVP 125 Query: 121 LDGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLVV 180 L GE+VIDKPGKGAFYAT L +L RGITHL+ AGVTTEVCVQTSMREANDRGY+ L++ Sbjct: 126 LAGELVIDKPGKGAFYATRLGEELAMRGITHLVFAGVTTEVCVQTSMREANDRGYDSLLI 185 Query: 181 EDACASYFPEFHRATLEMLTAQGGIVGWRAPLAQL 215 EDA ASYFP F +ATLEM+ +QGGIVGW APL+ L Sbjct: 186 EDATASYFPAFKQATLEMVRSQGGIVGWTAPLSSL 220 >ref|YP_477042.1| isochorismatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gb|ABD01779.1| isochorismatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 224 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 148/222 (66%), Positives = 170/222 (76%), Gaps = 1/222 (0%) Query: 1 MIRIDAFPYPYQFHPRST-ALVVIDMQRDFVEEGGFGSALGNDVRPLGAIVPTVAALLTL 59 M RI A PY Y+ S ALV+IDMQRDF+E GGFG LGNDV LG+IVPT+ LL Sbjct: 1 MFRIPALPYEYEVPSLSQLALVIIDMQRDFLEPGGFGEMLGNDVTQLGSIVPTLKGLLDF 60 Query: 60 ARAHQMLVVHTRESHLPDLSDCPRAKRLRGNPTLGIGDVGPMGRILVRGEPGNQILPQLA 119 R + V+HT E H PDLSDCP +KR RG +L IGD GPMGRIL+RGEPGN I+P+LA Sbjct: 61 FRQKGLTVIHTLEGHQPDLSDCPPSKRKRGKGSLTIGDEGPMGRILIRGEPGNTIIPELA 120 Query: 120 PLDGEIVIDKPGKGAFYATDLHAQLQERGITHLLVAGVTTEVCVQTSMREANDRGYECLV 179 PL GEIVI KPGKGAFYAT+L A LQ+RGITHLL GVTTEVCVQT+MREANDRGYECL+ Sbjct: 121 PLAGEIVIPKPGKGAFYATELQAILQKRGITHLLFTGVTTEVCVQTTMREANDRGYECLL 180 Query: 180 VEDACASYFPEFHRATLEMLTAQGGIVGWRAPLAQLHSAVAA 221 VED ASYFPEF +ATLEM+ AQGGIVGW + + A++ Sbjct: 181 VEDCTASYFPEFKQATLEMIRAQGGIVGWTSSAQNIQKALSG 222