BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1207.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774827.1| lipoprotein signal peptidase [Herbaspirillum... 305 1e-81 ref|YP_001352517.1| lipoprotein signal peptidase [Janthinobacter... 249 1e-64 ref|ZP_08273615.1| Lipoprotein signal peptidase [Oxalobacteracea... 239 1e-61 ref|YP_004753908.1| lipoprotein signal peptidase [Collimonas fun... 238 3e-61 ref|YP_001099159.1| lipoprotein signal peptidase [Herminiimonas ... 232 1e-59 >ref|YP_003774827.1| lipoprotein signal peptidase [Herbaspirillum seropedicae SmR1] gb|ADJ62919.1| lipoprotein signal peptidase [Herbaspirillum seropedicae SmR1] Length = 171 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 164/171 (95%), Positives = 170/171 (99%) Query: 1 MATKKRSSSSGSSSTTQGLLPWLGIATIVLLLDQLTKITILKLFHYGESVPVTGFFNLVL 60 MATKKRSSSS +SS+TQGLLPWLGIATIVLLLDQL+KITILKLFHYGES+PVTGFFNLVL Sbjct: 1 MATKKRSSSSSASSSTQGLLPWLGIATIVLLLDQLSKITILKLFHYGESLPVTGFFNLVL 60 Query: 61 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN 120 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN Sbjct: 61 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN 120 Query: 121 VIDRVVYGHVIDFLDVYVGNWHWPAFNLADSAICVGAVLFVVDELRRVSKK 171 VIDRVVYGHVIDFLDVYVGNWHWPAFN+ADSAICVGAVLFVVDELRRVS+K Sbjct: 121 VIDRVVYGHVIDFLDVYVGNWHWPAFNIADSAICVGAVLFVVDELRRVSRK 171 >ref|YP_001352517.1| lipoprotein signal peptidase [Janthinobacterium sp. Marseille] sp|A6SW70|LSPA_JANMA RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II gb|ABR88314.1| signal peptidase II [Janthinobacterium sp. Marseille] Length = 165 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 128/170 (75%), Positives = 147/170 (86%), Gaps = 5/170 (2%) Query: 1 MATKKRSSSSGSSSTTQGLLPWLGIATIVLLLDQLTKITILKLFHYGESVPVTGFFNLVL 60 MA+ KR SS SS +LPWLGIA +++LLDQ+TKITI +LF YGES VT FFNLVL Sbjct: 1 MASNKRYFSSSSS-----MLPWLGIAAVLVLLDQITKITITRLFVYGESHAVTSFFNLVL 55 Query: 61 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN 120 VYNKGAAFSFLA+ GWQRY FT +GIGAA+FII+LL+KH GQR+FCWALALILGGAIGN Sbjct: 56 VYNKGAAFSFLASETGWQRYFFTIMGIGAAIFIIYLLKKHAGQRLFCWALALILGGAIGN 115 Query: 121 VIDRVVYGHVIDFLDVYVGNWHWPAFNLADSAICVGAVLFVVDELRRVSK 170 VIDRV+YGHVIDFLDV++G WHWPAFN+ADSAIC+GAVLF+ DELRRV K Sbjct: 116 VIDRVLYGHVIDFLDVHIGGWHWPAFNIADSAICIGAVLFIYDELRRVGK 165 >ref|ZP_08273615.1| Lipoprotein signal peptidase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32916.1| Lipoprotein signal peptidase [Oxalobacteraceae bacterium IMCC9480] Length = 166 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 120/170 (70%), Positives = 145/170 (85%), Gaps = 4/170 (2%) Query: 1 MATKKRSSSSGSSSTTQGLLPWLGIATIVLLLDQLTKITILKLFHYGESVPVTGFFNLVL 60 MATK R S++ S GL PWLGIA I++L+DQLTKITI KLF YGES+PVT FFNLVL Sbjct: 1 MATKNRFSTAPRS----GLGPWLGIAAIIVLIDQLTKITITKLFAYGESLPVTSFFNLVL 56 Query: 61 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN 120 V+N+GAAFSFLA GWQRY F+A+G AAVFII+LL+++ GQR+FCWAL LILGGA+GN Sbjct: 57 VHNQGAAFSFLANESGWQRYFFSALGTAAAVFIIYLLKRNAGQRLFCWALTLILGGAVGN 116 Query: 121 VIDRVVYGHVIDFLDVYVGNWHWPAFNLADSAICVGAVLFVVDELRRVSK 170 VIDR ++G+VIDFLDV+V WHWPAFN+ADS IC+GA+LFV+DELRRV+K Sbjct: 117 VIDRGMHGYVIDFLDVHVAGWHWPAFNVADSTICIGAILFVLDELRRVNK 166 >ref|YP_004753908.1| lipoprotein signal peptidase [Collimonas fungivorans Ter331] gb|AEK63085.1| Lipoprotein signal peptidase [Collimonas fungivorans Ter331] Length = 177 Score = 238 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 131/170 (77%), Positives = 147/170 (86%), Gaps = 3/170 (1%) Query: 1 MATKKRSSSSGSSSTTQGLLPWLGIATIVLLLDQLTKITILKLFHYGESVPVTGFFNLVL 60 MATKKRSSSS S+ GL PWL IA +VLLLDQLTKITI++LF YGES VT FFNLVL Sbjct: 11 MATKKRSSSS---SSNYGLAPWLAIAALVLLLDQLTKITIVRLFSYGESHAVTSFFNLVL 67 Query: 61 VYNKGAAFSFLAASGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGN 120 VYNKGAAFSFL+ GWQRY FTA+GI AA+FI LL++H GQRMFC ALALILGGAIGN Sbjct: 68 VYNKGAAFSFLSTESGWQRYFFTALGIAAALFITFLLKRHAGQRMFCTALALILGGAIGN 127 Query: 121 VIDRVVYGHVIDFLDVYVGNWHWPAFNLADSAICVGAVLFVVDELRRVSK 170 V+DR+ YGHVIDFLD+YV NWHWPAFN+ADSAIC+GAVLFV+DELRRV+K Sbjct: 128 VVDRIAYGHVIDFLDIYVRNWHWPAFNIADSAICIGAVLFVIDELRRVNK 177 >ref|YP_001099159.1| lipoprotein signal peptidase [Herminiimonas arsenicoxydans] emb|CAL61032.1| Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II) [Herminiimonas arsenicoxydans] Length = 166 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 114/157 (72%), Positives = 134/157 (85%) Query: 14 STTQGLLPWLGIATIVLLLDQLTKITILKLFHYGESVPVTGFFNLVLVYNKGAAFSFLAA 73 ST G+ WLGIA I+++LDQ+TKI I F YGE++PVT FFNLVLVYNKGAAFSFLA+ Sbjct: 5 STNTGIARWLGIAAILIILDQITKIAITSTFVYGEAMPVTPFFNLVLVYNKGAAFSFLAS 64 Query: 74 SGGWQRYLFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGNVIDRVVYGHVIDF 133 GWQR+ FT IGIGA+ FII+LL+K+ GQR+ WAL LILGGAIGNVIDR++YGHVIDF Sbjct: 65 ETGWQRHFFTVIGIGASAFIIYLLKKNQGQRLLSWALTLILGGAIGNVIDRILYGHVIDF 124 Query: 134 LDVYVGNWHWPAFNLADSAICVGAVLFVVDELRRVSK 170 LDVY+GNWHWPAFN+ADSAIC+GAVLFV DEL+R K Sbjct: 125 LDVYIGNWHWPAFNIADSAICIGAVLFVYDELKRSKK 161