BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1194.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774815.1| hypothetical protein Hsero_1391 [Herbaspiril... 490 e-136 ref|YP_001100703.1| hypothetical protein HEAR2453 [Herminiimonas... 353 2e-95 ref|YP_001354211.1| hypothetical protein mma_2521 [Janthinobacte... 351 7e-95 ref|YP_004753921.1| hypothetical protein CFU_3274 [Collimonas fu... 314 1e-83 ref|ZP_08273667.1| Protein sirB1 [Oxalobacteraceae bacterium IMC... 310 2e-82 >ref|YP_003774815.1| hypothetical protein Hsero_1391 [Herbaspirillum seropedicae SmR1] gb|ADJ62907.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 273/285 (95%), Positives = 281/285 (98%) Query: 1 MGDMTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLALKLRQRLP 60 MGDMTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLA KL+QRLP Sbjct: 1 MGDMTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLAAKLKQRLP 60 Query: 61 QDASQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVISTRRGIPISLAVVYIELAQ 120 DASQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRV+STRRGIPISLAVVYIELAQ Sbjct: 61 SDASQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVLSTRRGIPISLAVVYIELAQ 120 Query: 121 QIGLEMKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSRQELEERLEPYLAHQPEEDFGDE 180 IGL+MKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSR+ELEERLEP+L HQP+E+FGDE Sbjct: 121 HIGLDMKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSREELEERLEPFLTHQPDEEFGDE 180 Query: 181 LPLAAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLA 240 LPLAAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLA Sbjct: 181 LPLAAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLA 240 Query: 241 YANLGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRKPS 285 YANLGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRKP+ Sbjct: 241 YANLGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRKPN 285 >ref|YP_001100703.1| hypothetical protein HEAR2453 [Herminiimonas arsenicoxydans] emb|CAL62582.1| Conserved hypothetical protein; putative TPR domain [Herminiimonas arsenicoxydans] Length = 279 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 185/278 (66%), Positives = 234/278 (84%), Gaps = 3/278 (1%) Query: 4 MTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLALKLRQRLPQDA 63 MT+ +L+YF++LV+QDDSIPLFE+AL + QD P +D A E +DTLA KL+QRLP DA Sbjct: 1 MTIKTLEYFSTLVQQDDSIPLFEAALAIAQDAEPGLDLAALEEEVDTLAAKLKQRLPDDA 60 Query: 64 SQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVISTRRGIPISLAVVYIELAQQIG 123 S +QKLRMLNH+F+ E+ F+GNVN+YY+PDNSY+HRV+STRRGIPISLA++Y+ELAQQI Sbjct: 61 SHLQKLRMLNHYFYNELGFSGNVNDYYNPDNSYLHRVLSTRRGIPISLAILYMELAQQID 120 Query: 124 LEMKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSRQELEERLEPYLAHQPEEDFGDELPL 183 LE++GVSFPGHFLMKLSVQSG++VLDP NG+SLSR+ELEER+EPY+ E+DF D+ Sbjct: 121 LEVQGVSFPGHFLMKLSVQSGQVVLDPFNGSSLSREELEERVEPYIL---EQDFPDDFQF 177 Query: 184 AAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLAYAN 243 AYL AA PR+IL RMLRNLK +FM+ + WQ++L+VQERL+ILLP +ITE+RDRGLAYAN Sbjct: 178 NAYLDAASPRDILVRMLRNLKLLFMQQEHWQRLLEVQERLLILLPRDITERRDRGLAYAN 237 Query: 244 LGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREAL 281 L QAAL+D+EAYL RP+A DA LR LPDL++A+ Sbjct: 238 LECPQAALQDIEAYLEQRPYAMDAAELRARLPDLKDAI 275 >ref|YP_001354211.1| hypothetical protein mma_2521 [Janthinobacterium sp. Marseille] gb|ABR89275.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 279 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 181/280 (64%), Positives = 231/280 (82%), Gaps = 3/280 (1%) Query: 4 MTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLALKLRQRLPQDA 63 MT+ SL+YF++LV+QDDSIPLFE+AL + QD P +D A + +DTLA+KL+QRLP DA Sbjct: 1 MTIQSLEYFSTLVQQDDSIPLFEAALAIAQDAEPNLDLAASQAEVDTLAVKLKQRLPDDA 60 Query: 64 SQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVISTRRGIPISLAVVYIELAQQIG 123 S +QKLRMLNH+F+ E+ F+GNVN+YY+P+NSY+HRVI TRRGIPISLAV+Y+ELAQQI Sbjct: 61 STLQKLRMLNHYFYNELGFSGNVNDYYNPENSYLHRVIDTRRGIPISLAVLYMELAQQID 120 Query: 124 LEMKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSRQELEERLEPYLAHQPEEDFGDELPL 183 L+++G+SFPGHFLMKLSVQSG++VLDP NGASLSR+ELEER+EPY+ E+DF D+ L Sbjct: 121 LDVQGISFPGHFLMKLSVQSGQVVLDPFNGASLSREELEERVEPYIM---EQDFPDDFQL 177 Query: 184 AAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLAYAN 243 AYL AA PR+IL RMLRNLK +FM+ +RWQ++L+VQERL+ILLP EI E+RDRG+AY N Sbjct: 178 TAYLDAASPRDILVRMLRNLKTLFMQQERWQRLLEVQERLLILLPHEIAERRDRGIAYMN 237 Query: 244 LGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRK 283 L QAAL+DLEAY+ RP+A D LR P LR+ + + Sbjct: 238 LECPQAALQDLEAYVKHRPYAMDTAELRAHFPKLRDDISR 277 >ref|YP_004753921.1| hypothetical protein CFU_3274 [Collimonas fungivorans Ter331] gb|AEK63098.1| hypothetical protein CFU_3274 [Collimonas fungivorans Ter331] Length = 283 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 179/281 (63%), Positives = 221/281 (78%), Gaps = 1/281 (0%) Query: 4 MTLTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLALKLRQRLPQDA 63 MT+TSLDYF SLV+Q + +PLFE+AL + QD YP++DF + LD LA LR RLP DA Sbjct: 1 MTITSLDYFTSLVQQANDVPLFEAALAIAQDVYPKLDFDAPQNDLDRLANTLRLRLPADA 60 Query: 64 SQIQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVISTRRGIPISLAVVYIELAQQIG 123 S IQKLR+LN FF+QE+ FA NVN+YYD DNSY+HRVI+ RRGIPISLA+VY+ELAQQIG Sbjct: 61 SAIQKLRLLNQFFYQELGFAINVNHYYDTDNSYLHRVIAKRRGIPISLALVYMELAQQIG 120 Query: 124 LEMKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSRQELEERLEPYL-AHQPEEDFGDELP 182 L +KGVSFPGHFLMKL+V SG+I++DP NGASLSR+ELEERLEPYL EE L Sbjct: 121 LPVKGVSFPGHFLMKLTVPSGDIMIDPANGASLSREELEERLEPYLPTENDEERAASRLS 180 Query: 183 LAAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLAYA 242 L +YL+ AHP +IL R+LRNLKAI+ + WQ++L+VQ+R++ILLP + E+RDRGLA+A Sbjct: 181 LISYLQIAHPHDILVRILRNLKAIYQQGNHWQRLLEVQQRILILLPGDAVERRDRGLAFA 240 Query: 243 NLGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRK 283 L QAALEDLE YLA RP A DA LRE + +LREA ++ Sbjct: 241 QLDCPQAALEDLEHYLAQRPLAADAATLREQVMELREACKR 281 >ref|ZP_08273667.1| Protein sirB1 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32858.1| Protein sirB1 [Oxalobacteraceae bacterium IMCC9480] Length = 277 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 173/283 (61%), Positives = 218/283 (77%), Gaps = 14/283 (4%) Query: 6 LTSLDYFASLVRQDDSIPLFESALTLGQDFYPEMDFAEEEMALDTLALKLRQRLPQDASQ 65 +T LDYFASLV+QDDSIPLFE+ALTL QD P+ D A ++ +D +A KL QR+P D + Sbjct: 2 ITPLDYFASLVQQDDSIPLFEAALTLAQDTDPQFDIAGAQVEVDRMAAKLLQRIPPDTAH 61 Query: 66 IQKLRMLNHFFFQEMAFAGNVNNYYDPDNSYIHRVISTRRGIPISLAVVYIELAQQIGLE 125 + KLR+LN +F+ E+ F GN+NNYYDPDNSY+HRV TRRGIPISLA++Y+E+AQQIGL+ Sbjct: 62 VPKLRLLNQYFYAELGFGGNINNYYDPDNSYLHRVARTRRGIPISLAMIYMEIAQQIGLD 121 Query: 126 MKGVSFPGHFLMKLSVQSGEIVLDPMNGASLSRQELEERLEPYLAHQPEEDFGDEL---- 181 ++G+SFPGHFLMKLS Q+GEI+LDP+NG+SLSR+ELEERLEP F D++ Sbjct: 122 VRGISFPGHFLMKLSTQAGEIILDPVNGSSLSREELEERLEP---------FADQIRQAG 172 Query: 182 -PLAAYLRAAHPREILARMLRNLKAIFMESQRWQQVLDVQERLVILLPEEITEKRDRGLA 240 PLA YL A R+IL RMLRNLK++F E RWQ +LDVQ+RL+ILLP ++ E+RDRGLA Sbjct: 173 KPLATYLEPASARDILTRMLRNLKSLFFEYDRWQSLLDVQQRLLILLPGDVAERRDRGLA 232 Query: 241 YANLGQAQAALEDLEAYLALRPHAEDAPNLREMLPDLREALRK 283 YA L AL+D+EAYLA RP A DA LR LP LR A+R+ Sbjct: 233 YARLDCPSPALDDIEAYLAARPDAADANVLRGQLPSLRAAIRR 275