BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1177.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774801.1| glycolate/propanediol utilization protein [H...   217   5e-55
ref|YP_001353934.1| GlcG protein [Janthinobacterium sp. Marseill...   198   3e-49
ref|YP_001099468.1| hypothetical protein HEAR1163 [Herminiimonas...   191   4e-47
ref|YP_004753154.1| hypothetical protein CFU_2504 [Collimonas fu...   184   4e-45
ref|YP_001791854.1| hypothetical protein Lcho_2824 [Leptothrix c...   182   1e-44

>ref|YP_003774801.1| glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae SmR1]
 emb|CAM32543.1| Glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae]
 gb|ADJ62893.1| glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae SmR1]
          Length = 135

 Score =  217 bits (552), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 129/135 (95%), Positives = 131/135 (97%)

Query: 1   MQTKPFLSLDDVKKIAAGAEAEARANNWNVAISVVDDGGHLLWLQRMDGAAPISSQIAPA 60
           MQTKPFL+LDDVKKIAAGAEAEARANNWNV ISVVDDGGHLLWLQRMDGAAPISSQIAPA
Sbjct: 1   MQTKPFLTLDDVKKIAAGAEAEARANNWNVVISVVDDGGHLLWLQRMDGAAPISSQIAPA 60

Query: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPIVVDGQCVGAVGVSGVKSS 120
           KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVP+VVDG  VGAVGVSGVKSS
Sbjct: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPVVVDGHYVGAVGVSGVKSS 120

Query: 121 EDVQIGKAGIAALGL 135
           EDVQI KAGIAALGL
Sbjct: 121 EDVQIAKAGIAALGL 135


>ref|YP_001353934.1| GlcG protein [Janthinobacterium sp. Marseille]
 gb|ABR88715.1| GlcG protein [Janthinobacterium sp. Marseille]
          Length = 135

 Score =  198 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 102/134 (76%), Positives = 120/134 (89%)

Query: 1   MQTKPFLSLDDVKKIAAGAEAEARANNWNVAISVVDDGGHLLWLQRMDGAAPISSQIAPA 60
           MQTK  L+L+DVKKIAA AE EA  + W V I++VDDGGHLLWLQR+DGAAPISS IAPA
Sbjct: 1   MQTKQVLTLEDVKKIAAAAETEANLHKWCVTIAIVDDGGHLLWLQRLDGAAPISSHIAPA 60

Query: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPIVVDGQCVGAVGVSGVKSS 120
           KA+TAALGRRESK+YED+INNGR SF++AP L+G+LEGGVPIV++GQC+GAVGVSGVKS+
Sbjct: 61  KAKTAALGRRESKVYEDIINNGRFSFITAPTLEGMLEGGVPIVINGQCLGAVGVSGVKST 120

Query: 121 EDVQIGKAGIAALG 134
           EDVQI KAGI A+G
Sbjct: 121 EDVQIAKAGIIAIG 134


>ref|YP_001099468.1| hypothetical protein HEAR1163 [Herminiimonas arsenicoxydans]
 emb|CAL61341.1| conserved hypothetical protein, putative GlcG protein
           [Herminiimonas arsenicoxydans]
          Length = 135

 Score =  191 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 101/134 (75%), Positives = 121/134 (90%)

Query: 1   MQTKPFLSLDDVKKIAAGAEAEARANNWNVAISVVDDGGHLLWLQRMDGAAPISSQIAPA 60
           MQ+K  L+L+DVKKIAA AE EA  N WNV I++VDDGGHLLWLQRMDGAAPISS IAPA
Sbjct: 1   MQSKQILTLEDVKKIAAAAETEATLNKWNVTIAIVDDGGHLLWLQRMDGAAPISSHIAPA 60

Query: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPIVVDGQCVGAVGVSGVKSS 120
           KA+TAALGRRESK+YED+INNGR SF++AP L+G+LEGGVP++++GQC+GAVGVSGVKS+
Sbjct: 61  KAKTAALGRRESKVYEDIINNGRFSFMTAPTLEGMLEGGVPVIINGQCLGAVGVSGVKST 120

Query: 121 EDVQIGKAGIAALG 134
           EDVQI KAG+ A+G
Sbjct: 121 EDVQIAKAGLIAIG 134


>ref|YP_004753154.1| hypothetical protein CFU_2504 [Collimonas fungivorans Ter331]
 gb|AEK62331.1| hypothetical protein CFU_2504 [Collimonas fungivorans Ter331]
          Length = 151

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 104/135 (77%), Positives = 120/135 (88%)

Query: 1   MQTKPFLSLDDVKKIAAGAEAEARANNWNVAISVVDDGGHLLWLQRMDGAAPISSQIAPA 60
           M++K  L+LDDVKKIAA AEAEA  N+W V IS+VD+GGHLLWLQRMDG APIS+ I+PA
Sbjct: 17  MKSKQVLTLDDVKKIAAAAEAEAVKNHWAVTISIVDEGGHLLWLQRMDGCAPISAHISPA 76

Query: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPIVVDGQCVGAVGVSGVKSS 120
           KA+TAALG+RESKIYEDMINNGR SF++AP L+GLLEGGVPIVV G+ +GAVGVSGVKSS
Sbjct: 77  KAKTAALGQRESKIYEDMINNGRFSFITAPNLEGLLEGGVPIVVGGEYLGAVGVSGVKSS 136

Query: 121 EDVQIGKAGIAALGL 135
           EDVQI KAGIAAL +
Sbjct: 137 EDVQIAKAGIAALSV 151


>ref|YP_001791854.1| hypothetical protein Lcho_2824 [Leptothrix cholodnii SP-6]
 gb|ACB35089.1| protein of unknown function DUF336 [Leptothrix cholodnii SP-6]
          Length = 135

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 101/134 (75%), Positives = 120/134 (89%)

Query: 1   MQTKPFLSLDDVKKIAAGAEAEARANNWNVAISVVDDGGHLLWLQRMDGAAPISSQIAPA 60
           M+TKP L+L+DV+++AA AEAEA  NNW V I++VDDGGHLLWLQR+DGAA +S+ IAPA
Sbjct: 1   MKTKPVLTLEDVRRMAAAAEAEALNNNWAVTIAIVDDGGHLLWLQRLDGAAALSAHIAPA 60

Query: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPIVVDGQCVGAVGVSGVKSS 120
           KART+ALGRRES+IYE+MIN GR SFLSAP +DGLLEGGVPI+VDG+C+GAVGVSGVKS 
Sbjct: 61  KARTSALGRRESRIYEEMINQGRTSFLSAPEIDGLLEGGVPIMVDGECIGAVGVSGVKSV 120

Query: 121 EDVQIGKAGIAALG 134
           ED Q+ KAGIAALG
Sbjct: 121 EDAQVAKAGIAALG 134