BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1148.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776921.1| Fe2+-dicitrate sensor membrane protein [Herb... 382 e-104 ref|YP_001353719.1| Fe2+-dicitrate sensor, membrane component [J... 192 8e-47 ref|YP_348854.1| putative FecR [Pseudomonas fluorescens Pf0-1] >... 186 4e-45 ref|YP_001353713.1| Fe2+-dicitrate sensor, membrane component [J... 170 2e-40 ref|YP_003980183.1| FecR family protein [Achromobacter xylosoxid... 167 2e-39 >ref|YP_003776921.1| Fe2+-dicitrate sensor membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65013.1| Fe2+-dicitrate sensor, membrane component protein [Herbaspirillum seropedicae SmR1] Length = 316 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 222/317 (70%), Positives = 256/317 (80%), Gaps = 1/317 (0%) Query: 16 MKNEDKIVEQAIEWMLQIEQGELSKGEQAAFEHWKAADPRHAVAYANLAQSVQQFDVPRQ 75 M ++KIVEQAIEWMLQ+EQG+L GE+AAFE WKAADPRHA+AYANL+QSVQQFDVPRQ Sbjct: 1 MGKDEKIVEQAIEWMLQLEQGDLPPGERAAFEQWKAADPRHAMAYANLSQSVQQFDVPRQ 60 Query: 76 VGAAPQVLRNTLQQKSRRRKALKQIAILAGLTVGAGLLADRVTPLAGLRADLHTGTGERR 135 VGAAP +LRNTLQQKS+RRKALK+IA LAGL VGA L DRVTP+A L ADLHTGTG+R+ Sbjct: 61 VGAAPVILRNTLQQKSKRRKALKRIAALAGLAVGAAALLDRVTPVAALTADLHTGTGQRQ 120 Query: 136 RTLLADGSTLILNARSAIDQQIASGTRQIRLLAGEIQLQVAQRADLPFIIQTVHGSAELL 195 RT LADGS + LNARSAID I+ RQ+RLL GEIQ+Q+A LPF I+TVHGS Sbjct: 121 RTTLADGSIITLNARSAIDHLISPVLRQVRLLEGEIQVQIAAANALPFSIETVHGSVSAT 180 Query: 196 GGTLAMALQPARTELVAVQAAQIGVVTRNNTRGEVTGGQHLWFDSDRIGTARANAGGETS 255 GTL + LQP RT+LVA QAA + + TRN + GQ WFD D IG RA G E S Sbjct: 181 AGTLMLGLQPLRTDLVAQQAAAL-LSTRNGQHATLAAGQRTWFDQDEIGAPRAAGGAENS 239 Query: 256 WVDGYYTAANNTLAEVVAALRPYRTGILRLDPAVAGLRISGAFPLDDSERALSALASALP 315 WV+GYYTA++N+L EVVAALRPYR G+LRLDPAVA LRISGAFPLDD++RALSALASALP Sbjct: 240 WVEGYYTASDNSLEEVVAALRPYRKGLLRLDPAVAQLRISGAFPLDDTDRALSALASALP 299 Query: 316 ISVTRVSPYWVTISART 332 I+V RVSPYWV+IS R+ Sbjct: 300 ITVNRVSPYWVSISGRS 316 >ref|YP_001353719.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] gb|ABR89807.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] Length = 329 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 117/309 (37%), Positives = 169/309 (54%), Gaps = 1/309 (0%) Query: 20 DKIVEQAIEWMLQIEQGELSKGEQAAFEHWKAADPRHAVAYANLAQSVQQFDVPRQVGAA 79 D IVE AI+W++ + G+ + AF+ W+ D RH A +L Q + FD Sbjct: 15 DPIVEAAIDWIICLRSGDAGPVQYEAFKQWRLQDVRHDTAIRHLEQVLGTFDSLPASSHV 74 Query: 80 PQVLRNTLQQKSRRRKALKQIAILAGLTVGAGLLADRVTPLAGLRADLHTGTGERRRTLL 139 R L + RRK L+ L + G GLLA R+TPL + ADL T TG+R+ L Sbjct: 75 RSSARRALLKSPDRRKLLRNTLALLLVGSGTGLLAQRITPLNTVTADLRTSTGQRKHMHL 134 Query: 140 ADGSTLILNARSAIDQQIASGTRQIRLLAGEIQLQVAQRADLPFIIQTVHGSAELLGGTL 199 ADGS + LNARSA D TR+I L +GEI + VA A PFI+++ GS LG T Sbjct: 135 ADGSQIWLNARSAADIDFDESTRRIHLRSGEIVVDVAADAQRPFIVESAEGSMRALG-TR 193 Query: 200 AMALQPARTELVAVQAAQIGVVTRNNTRGEVTGGQHLWFDSDRIGTARANAGGETSWVDG 259 + Q ++AV + + + ++ + G+ FD +I +G +WVDG Sbjct: 194 FLVRQEEGATVLAVLHSSVRIDAKDGASRTLVAGETARFDQSQITVIDTASGAAAAWVDG 253 Query: 260 YYTAANNTLAEVVAALRPYRTGILRLDPAVAGLRISGAFPLDDSERALSALASALPISVT 319 + + L+EV+AA+RPYR+G LR+ P LR++G FPLDDS+R L+ALA LPI + Sbjct: 254 FIEVHDRPLSEVIAAMRPYRSGFLRVTPQAGALRVTGTFPLDDSKRTLAALAETLPIVIR 313 Query: 320 RVSPYWVTI 328 + YW++I Sbjct: 314 SRTDYWISI 322 >ref|YP_348854.1| putative FecR [Pseudomonas fluorescens Pf0-1] gb|ABA74863.1| Putative FecR protein [Pseudomonas fluorescens Pf0-1] Length = 315 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 120/318 (37%), Positives = 175/318 (55%), Gaps = 6/318 (1%) Query: 16 MKNEDKIVEQAIEWMLQIEQGELSKGEQAAFEHWKAADPRHAVAYANLAQSVQQFDVPRQ 75 M+ ++ ++++A +WM ++ G +S E+AAF+ W+ AD RH + + Sbjct: 1 MRPDETLIDEAAQWMALLQSGHVSLQERAAFDAWRTADSRHQQIIEQMGGGLNLLRHANL 60 Query: 76 VGAAPQVLRNTLQQKSRRRKALKQIAILAGLTVGAGLLADRV--TPLAGLRADLHTGTGE 133 G + + ++L S RR+ L + G+ V AGLL R P AG +L TGTGE Sbjct: 61 RGLPRESVLHSLNAPSSRRRFLSGSLSVLGIAVLAGLLGRRYGWLPEAG---ELSTGTGE 117 Query: 134 RRRTLLADGSTLILNARSAIDQQIASGTRQIRLLAGEIQLQVAQRADLPFIIQTVHGSAE 193 RR LADGS L LNARS + + + R + L +GE+ + VA+ PF+++T HG Sbjct: 118 RREFTLADGSALTLNARSRVVPRFNNIERLLDLRSGELLIDVAKNLARPFVVETEHGRMR 177 Query: 194 LLGGTLAMALQPARTELVAVQAAQIGVVTRNNTRGEVTGGQHLWFDSDRIGTARANAGGE 253 LG + T LV + + Q+ VVT + R V G+ L F++ I G E Sbjct: 178 ALGTKFLVQRGEDSTRLVMLHS-QVEVVTASGARQVVEAGESLLFNAQEILALEPGNGQE 236 Query: 254 TSWVDGYYTAANNTLAEVVAALRPYRTGILRLDPAVAGLRISGAFPLDDSERALSALASA 313 ++WV G + L+EV+ +LR YR GIL L P VAGLR+SG +PLDDS+R L L + Sbjct: 237 SAWVQGRLEVRDRPLSEVIDSLRSYRRGILHLSPEVAGLRLSGLYPLDDSDRTLQLLERS 296 Query: 314 LPISVTRVSPYWVTISAR 331 LPI VT +PYWV+I AR Sbjct: 297 LPIRVTWHNPYWVSIEAR 314 >ref|YP_001353713.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] gb|ABR89825.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] Length = 299 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 15/303 (4%) Query: 38 LSKGEQAAFEHWKAADPRHAVAYANLAQSVQQ---------FDVPRQVGAAPQVLRNTLQ 88 ++ E+ AFE W+AADP H +A+ +A + + P QV AA + L NT Sbjct: 1 MTDSERRAFEQWRAADPSHELAWNRVAGLLNESLSVVRDAGLRAPGQVQAAQRALLNT-- 58 Query: 89 QKSRRRKALKQIAILAGLTVGAGLLADRVTPLAGLRADLHTGTGERRRTLLADGSTLILN 148 RRRK L+ + AG+ + LLA+R + L ADL TGTG+R+ LADGS++ LN Sbjct: 59 ---RRRKLLRGALVFAGVGTTSVLLAERQIAVGQLWADLQTGTGQRQTFALADGSSVQLN 115 Query: 149 ARSAIDQQIASGTRQIRLLAGEIQLQVAQRADLPFIIQTVHGSAELLGGTLAMALQPART 208 ARSA+D RQ+RL AGE+ VA A PF++QT HG LG ++ Q ++ Sbjct: 116 ARSAVDIDFNQDRRQLRLRAGELIASVAPDAGRPFLVQTTHGIIRALGTRFLVSQQDRQS 175 Query: 209 ELVAVQAAQIGVVTRNNTRGEVTGGQHLWFDSDRIGTARANAGGETSWVDGYYTAANNTL 268 ++V ++ + + + TR+ + G+ FD +I NA +W DG N TL Sbjct: 176 QVVVLEHS-VELRTRDGQHMRLREGEGATFDHSQIERIAGNASAHAAWSDGMLAVENATL 234 Query: 269 AEVVAALRPYRTGILRLDPAVAGLRISGAFPLDDSERALSALASALPISVTRVSPYWVTI 328 AEVVAAL+PY +G +RL P A LR G FPL+D L LA LP+ + + ++I Sbjct: 235 AEVVAALKPYYSGYIRLSPEAASLRTFGVFPLEDPGHVLRTLAHTLPLKMHHYGNWLISI 294 Query: 329 SAR 331 + Sbjct: 295 DVK 297 >ref|YP_003980183.1| FecR family protein [Achromobacter xylosoxidans A8] gb|ADP17468.1| FecR family protein 16 [Achromobacter xylosoxidans A8] Length = 326 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 117/327 (35%), Positives = 165/327 (50%), Gaps = 17/327 (5%) Query: 22 IVEQAIEWMLQIEQGELSKGEQAAFEHWKAADPRHAVAYANLAQSVQQFDVPRQVGAAP- 80 + +Q I W+L + G+ + + F W+AADP H A+ L S++ R A P Sbjct: 1 MADQVINWLLLLRSGKATAQDYNDFLAWRAADPAHENAWQQLTGSLEGSTFGRLGDAYPA 60 Query: 81 ---------------QVLRNTLQQKSRRRKALKQIAILAGLTVGAGLLADRVTPLAGLRA 125 RR+ L LAG A + + PL + A Sbjct: 61 GYATAGPAIAPHAAPPGPGPGPVIAPPRRRFLAGALALAGTGACAAYVGNAFYPLGNVAA 120 Query: 126 DLHTGTGERRRTLLADGSTLILNARSAIDQQIASGTRQIRLLAGEIQLQVAQRADLPFII 185 D T TGERRR +L+DGS L+L+ARS ++ RQ+RLL G + + VA + PF++ Sbjct: 121 DAATATGERRRYVLSDGSQLLLDARSRVNLDFTPAYRQVRLLDGAVTVSVAPDSRRPFLV 180 Query: 186 QTVHGSAELLGGTLAMALQPARTELVAVQAAQIGVVTRNNTRGEVTGGQHLWFDSDRIGT 245 QT G+ LG T M Q A+ LV V ++ V T + G V G FD+ R+ T Sbjct: 181 QTAEGTVRALG-TRYMVRQQAQRTLVVVHEHEVEVETMSGGHGTVRAGTGARFDAARMDT 239 Query: 246 ARANAGGETSWVDGYYTAANNTLAEVVAALRPYRTGILRLDPAVAGLRISGAFPLDDSER 305 RA E +W G+ A LAEV+AALRPYR+G LR+ A GL +SG FPLDD++ Sbjct: 240 PRAELMAEAAWEAGWVEARGRPLAEVIAALRPYRSGTLRVSMAAGGLPVSGHFPLDDTDA 299 Query: 306 ALSALASALPISVTRVSPYWVTISART 332 AL L +PI V R +P++V+I+ T Sbjct: 300 ALDTLRDIMPIHVRRFTPWFVSINVAT 326