BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1143.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776926.1| hypothetical protein Hsero_3539 [Herbaspiril... 263 2e-68 ref|YP_440479.1| hypothetical protein BTH_II2292 [Burkholderia t... 147 1e-33 ref|ZP_02372016.1| hypothetical protein BthaT_13435 [Burkholderi... 146 2e-33 ref|ZP_01768394.1| hypothetical protein BURPS305_2461 [Burkholde... 146 3e-33 ref|YP_001064128.1| hypothetical protein BURPS668_A3137 [Burkhol... 145 4e-33 >ref|YP_003776926.1| hypothetical protein Hsero_3539 [Herbaspirillum seropedicae SmR1] gb|ADJ65018.1| hypothetical protein Hsero_3539 [Herbaspirillum seropedicae SmR1] Length = 239 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 139/206 (67%), Positives = 167/206 (81%) Query: 18 LTLPVAPALRGMIDAALNAVMEEAAAEARLTMGTLGRCADYALVGARVLRLLLNRPYTAL 77 L++PVAPA+R +ID ALN VME+AAAEA L+ GTLGRCADYALVGARVL +LL+ PY A+ Sbjct: 23 LSVPVAPAMRDLIDTALNTVMEQAAAEAGLSRGTLGRCADYALVGARVLSVLLDHPYEAV 82 Query: 78 SGGEVIDCGSGLYVAMHPGRKARRSARKLSELKDYHCWIEALHPMPDGSLRREIIDFTMR 137 SGGE+IDCG GLYV + PGR+ARR AR+LSEL+DYHCWIEA +P+PDGS RRE IDFTMR Sbjct: 83 SGGEIIDCGGGLYVVLQPGREARRRARRLSELRDYHCWIEAWYPLPDGSRRRETIDFTMR 142 Query: 138 HDPLVAEVCGLPFTRSHRHDYLWAWQEEIAPLPLAARAQLPPQSRSGDWMWVDQDCLRLL 197 HD LVAEV LP+TR+ YLW WQ++IAP+P ARA L R+G WMW D+DC RLL Sbjct: 143 HDRLVAEVFSLPYTRAQPPSYLWEWQDQIAPVPQEARAHLSANGRNGAWMWADKDCQRLL 202 Query: 198 KKYEQDHEGLLARLTGQVLHKLVEAM 223 KKY+ DH+ LL RL GQVLH L++ + Sbjct: 203 KKYDADHQALLDRLAGQVLHALMQVL 228 >ref|YP_440479.1| hypothetical protein BTH_II2292 [Burkholderia thailandensis E264] gb|ABC34111.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 219 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 86/220 (39%), Positives = 118/220 (53%), Gaps = 7/220 (3%) Query: 5 ASFAAAPAANGAALTLPVAPALRGMIDAALNAVMEEAAAEARLTMGTLGRCADYALVGAR 64 AS P + L P+ AL +ID ++ + EA T RCADYA+VGAR Sbjct: 4 ASMQHEPETSPPILAAPIHAALHPVIDEVVHRSVSEAT-----TKNGYMRCADYAIVGAR 58 Query: 65 VLRLLLNRPYTALSGGEVIDCGSGLYVAMHPGRKARRSARKLSELKDYHCWIEALHPMPD 124 VL +L Y ++GGEV+D G G + R+ RR+AR LS+L YHCWIEA H D Sbjct: 59 VLSMLTGARYRPVAGGEVMDFGGGNLFVLCSTRERRRAARHLSQLARYHCWIEARHTDAD 118 Query: 125 GSLRREIIDFTMRHDPLVAEVCGLPFTRSHRHDYLWAWQEEIAPLPLAARAQLPPQSRSG 184 G R E+IDFTMRHD +VA + G+PFT S R Y W W +E +P R + Sbjct: 119 GRTRTEVIDFTMRHDAMVASMIGVPFTGS-RGTYWWGWDDE-HTVPAELRDHSAFAKQGP 176 Query: 185 DWMWVDQDCLRLLKKYEQDHEGLLARLTGQVLHKLVEAMQ 224 W W +++C LL+ YE++ R + LH L + ++ Sbjct: 177 HWRWAERECTMLLRAYERERPNYFGRQVSRALHLLADRIE 216 >ref|ZP_02372016.1| hypothetical protein BthaT_13435 [Burkholderia thailandensis TXDOH] ref|ZP_02385889.1| hypothetical protein BthaB_13208 [Burkholderia thailandensis Bt4] ref|ZP_05589394.1| hypothetical protein BthaA_18294 [Burkholderia thailandensis E264] Length = 214 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 24 PALRGMIDAALNAVMEE----AAAEARLTMGTLGRCADYALVGARVLRLLLNRPYTALSG 79 P L I AAL+ V++E + +EA G + RCADYA+VGARVL +L Y ++G Sbjct: 10 PILAAPIHAALHPVIDEVVHRSVSEATTKNGYM-RCADYAIVGARVLSMLTGARYRPVAG 68 Query: 80 GEVIDCGSGLYVAMHPGRKARRSARKLSELKDYHCWIEALHPMPDGSLRREIIDFTMRHD 139 GEV+D G G + R+ RR+AR LS+L YHCWIEA H DG R E+IDFTMRHD Sbjct: 69 GEVMDFGGGNLFVLCSTRERRRAARHLSQLARYHCWIEARHTDADGRTRTEVIDFTMRHD 128 Query: 140 PLVAEVCGLPFTRSHRHDYLWAWQEEIAPLPLAARAQLPPQSRSGDWMWVDQDCLRLLKK 199 +VA + G+PFT S R Y W W +E +P R + W W +++C LL+ Sbjct: 129 AMVASMIGVPFTGS-RGTYWWGWDDE-HTVPAELRDHSAFAKQGPHWRWAERECTMLLRA 186 Query: 200 YEQDHEGLLARLTGQVLHKLVEAMQ 224 YE++ R + LH L + ++ Sbjct: 187 YERERPNYFGRQVSRALHLLADRIE 211 >ref|ZP_01768394.1| hypothetical protein BURPS305_2461 [Burkholderia pseudomallei 305] gb|EBA46836.1| hypothetical protein BURPS305_2461 [Burkholderia pseudomallei 305] Length = 214 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 117/215 (54%), Gaps = 9/215 (4%) Query: 11 PAANGAALTLPVAPALRGMIDAALNAVMEEAAAEARLTMGTLGRCADYALVGARVLRLLL 70 P + L P+ AL +ID ++ + EA T RCADYA+VGARVL +L Sbjct: 5 PETSPPILAAPIRAALHPVIDEVVHRSVSEAT-----TKDGYMRCADYAIVGARVLSMLT 59 Query: 71 NRPYTALSGGEVIDCGSGLYVAMHPGRKARRSARKLSELKDYHCWIEALHPMPDGSLRRE 130 Y ++GGEV+D G G A+ R+ RR+AR LS+L YHCWIEA H DG R E Sbjct: 60 GVRYRPVAGGEVMDFGGGNLFALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTE 119 Query: 131 IIDFTMRHDPLVAEVCGLPFTRSHRHDYLWAWQEE-IAPLPLAARAQLPPQSRSGDWMWV 189 +IDFTMRHD +VA + G+PFT S R Y W W +E I P L Q W W Sbjct: 120 VIDFTMRHDAMVASMVGMPFTGS-RGTYWWGWDDEHIVPAELRDHPAFAKQGPR--WRWA 176 Query: 190 DQDCLRLLKKYEQDHEGLLARLTGQVLHKLVEAMQ 224 +++C LL+ YE++ R + LH L + ++ Sbjct: 177 ERECTVLLRAYERERPNYFGRQVSRALHLLADRIE 211 >ref|YP_001064128.1| hypothetical protein BURPS668_A3137 [Burkholderia pseudomallei 668] gb|ABN87248.1| hypothetical protein BURPS668_A3137 [Burkholderia pseudomallei 668] Length = 214 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 117/215 (54%), Gaps = 9/215 (4%) Query: 11 PAANGAALTLPVAPALRGMIDAALNAVMEEAAAEARLTMGTLGRCADYALVGARVLRLLL 70 P + L P+ AL +ID ++ + EA T RCADYA+VGARVL +L Sbjct: 5 PETSPPILAAPIRAALHPVIDEVVHRSVSEAT-----TKDGYMRCADYAIVGARVLSMLT 59 Query: 71 NRPYTALSGGEVIDCGSGLYVAMHPGRKARRSARKLSELKDYHCWIEALHPMPDGSLRRE 130 Y ++GGEV+D G G A+ R+ RR+AR LS+L YHCWIEA H DG R E Sbjct: 60 GVRYRPVAGGEVMDFGGGKLFALCSTRERRRAARHLSQLARYHCWIEARHTDADGRARTE 119 Query: 131 IIDFTMRHDPLVAEVCGLPFTRSHRHDYLWAWQEE-IAPLPLAARAQLPPQSRSGDWMWV 189 +IDFTMRHD +VA + G+PFT S R Y W W +E I P L Q W W Sbjct: 120 VIDFTMRHDAMVASMVGMPFTGS-RGTYWWGWDDEHIVPAELRDHPAFAKQGPR--WRWA 176 Query: 190 DQDCLRLLKKYEQDHEGLLARLTGQVLHKLVEAMQ 224 +++C LL+ YE++ R + LH L + ++ Sbjct: 177 ERECTVLLRAYERERPNYFGRQVSRALHLLADRIE 211