BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1139.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777750.1| transport transmembrane protein [Herbaspiril... 644 0.0 ref|YP_001752940.1| major facilitator transporter [Methylobacter... 420 e-115 ref|YP_004115778.1| major facilitator superfamily protein [Panto... 415 e-114 ref|YP_001524937.1| major facilitator superfamily protein [Azorh... 407 e-111 ref|NP_770942.1| hypothetical protein bll4302 [Bradyrhizobium ja... 399 e-109 >ref|YP_003777750.1| transport transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65842.1| transport transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 353/384 (91%), Positives = 371/384 (96%) Query: 28 GWCVSYIDRAAITFAATQIASEFALKPSDLGILLSSFFLGYSLLQLPGGWLADRYGSRPV 87 GWCVSYIDRAAITFAATQIASEF LKPSDLGILLSSFFLGYSLLQLPGGWLADRYGSRPV Sbjct: 21 GWCVSYIDRAAITFAATQIASEFHLKPSDLGILLSSFFLGYSLLQLPGGWLADRYGSRPV 80 Query: 88 IVISILLWSVFTGVTGMAWSITSLVVIRFIFGLGEGAFPAASVKGVAENFSREERPKMSS 147 IVISILLWS+FTGVTGMAWS+TSLV+IRFIFG+GEGAFPAASVKGVAENFSR+ERPKMSS Sbjct: 81 IVISILLWSLFTGVTGMAWSVTSLVMIRFIFGVGEGAFPAASVKGVAENFSRDERPKMSS 140 Query: 148 LLMSSNYIGSMLAPLLIAPLIMHFGWRAVFHTIGIAGLVFALVYWFCVRPVRPGKDGPKA 207 LLMSSNYIGSMLAPLLIAPLI+H+GWRAVFH IGIAG+VFALVYWFCVRPVRPG G A Sbjct: 141 LLMSSNYIGSMLAPLLIAPLILHYGWRAVFHYIGIAGVVFALVYWFCVRPVRPGVGGAGA 200 Query: 208 INKEAFAALLRMPLMWKIVAVWFGLSIINKGLDSWMPTYLMTVRGLNLKAVGLLLPLPYI 267 INK+AF AL++MPLMW+IVAVWFGLSIINKGLD+WMPTYLMTVRGLNLKAVGLLLPLPYI Sbjct: 201 INKQAFMALMKMPLMWQIVAVWFGLSIINKGLDTWMPTYLMTVRGLNLKAVGLLLPLPYI 260 Query: 268 MAGLSTAIGGWVMVRFFDGREKLLLIASSLLTAVFVYCMYTAVTVEGVIAWQCLAYFFKS 327 MAGLSTAIGGWVMVRFFDGREKLLLI SSLLTAVFVYCMY+A +VEGVIAWQCLAYFFKS Sbjct: 261 MAGLSTAIGGWVMVRFFDGREKLLLIGSSLLTAVFVYCMYSAASVEGVIAWQCLAYFFKS 320 Query: 328 FVLATCIALPTKLLQAQMVGSGVGMVNLGGQLAGFISPLVIGFLVSAFANYDYAFSFLIG 387 FVLATCIALPTK+LQAQ+VGSGVGMVNLGGQLAGFISPLVIGFLVSAFANYDYAFSFLIG Sbjct: 321 FVLATCIALPTKMLQAQLVGSGVGMVNLGGQLAGFISPLVIGFLVSAFANYDYAFSFLIG 380 Query: 388 AALFSVLVSLFIRTSKTGGQMQPA 411 AA FSVLVSLFIRT K+ QMQPA Sbjct: 381 AAFFSVLVSLFIRTHKSDSQMQPA 404 >ref|YP_001752940.1| major facilitator transporter [Methylobacterium radiotolerans JCM 2831] gb|ACB22257.1| major facilitator superfamily MFS_1 [Methylobacterium radiotolerans JCM 2831] Length = 409 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 236/420 (56%), Positives = 304/420 (72%), Gaps = 20/420 (4%) Query: 1 MDAAQAAMTKAQGEGRYKYLVLVLLYLGWCVSYIDRAAITFAATQIASEFALKPSDLGIL 60 MD AQ A GR YL LLY +C+SY+DRAAI A TQI EF L P++ G++ Sbjct: 1 MDPAQPARP-----GR-PYLGFALLYAAYCISYVDRAAIALALTQIGREFGLSPTEYGVI 54 Query: 61 LSSFFLGYSLLQLPGGWLADRYGSRPVIVISILLWSVFTGVTGMAWSITSLVVIRFIFGL 120 LS FF GYSL+QLPGGWLADR+GS+ V++ + + WS+FT +TG+AWS TSL+VIR IFGL Sbjct: 55 LSVFFFGYSLMQLPGGWLADRFGSKYVVIGTAVAWSIFTALTGLAWSFTSLIVIRLIFGL 114 Query: 121 GEGAFPAASVKGVAENFSREERPKMSSLLMSSNYIGSMLAPLLIAPLIMHFGWRAVFHTI 180 EG FPAA +K V+E F+ RPKMSSL++SSNY+GS+LAPL++APL+++FGWR F + Sbjct: 115 AEGGFPAACIKAVSEQFTGPARPKMSSLMISSNYVGSLLAPLVMAPLLIYFGWRHAFFIV 174 Query: 181 GIAGLVFALVYWFCVRPVRPGKD---------GPKAINKEAFAALLRMPLMWKIVAVWFG 231 G AGL+F LVY + P RP + GP A +E LLR PL+W+++ VWFG Sbjct: 175 GAAGLIFGLVYDRMI-PHRPPAEVPGAARAGRGPSAPARE----LLRNPLLWQLMLVWFG 229 Query: 232 LSIINKGLDSWMPTYLMTVRGLNLKAVGLLLPLPYIMAGLSTAIGGWVMVRFFDGREKLL 291 L INKGLD+WMPTYL+ RGL+LKAVGLL PLP+IMA ++TAIGGWVM+RFFDGREK + Sbjct: 230 LGCINKGLDAWMPTYLLQARGLDLKAVGLLTPLPFIMASIATAIGGWVMIRFFDGREKYM 289 Query: 292 LIASSLLTAVFVYCMYTAVTVEGVIAWQCLAYFFKSFVLATCIALPTKLLQAQMVGSGVG 351 ++ S++LT +F+Y MY A T+ GVI +Q + YFFKSFV A ALPTKL++ +G+ +G Sbjct: 290 IVVSTMLTGIFLYLMYQAPTIAGVITFQSITYFFKSFVFAAAFALPTKLMRDDQIGTSIG 349 Query: 352 MVNLGGQLAGFISPLVIGFLVSAFANYDYAFSFLIGAALFSVLVSLFIRTSKTGGQMQPA 411 MVNLGGQ AGFI+PLV+G LV + YD AF FL+ AA + LV+L IR+ T Q A Sbjct: 350 MVNLGGQCAGFIAPLVMGLLVDHYGTYDAAFDFLLTAAAVATLVALTIRSRSTAAVPQAA 409 >ref|YP_004115778.1| major facilitator superfamily protein [Pantoea sp. At-9b] gb|ADU69222.1| major facilitator superfamily MFS_1 [Pantoea sp. At-9b] Length = 403 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 230/394 (58%), Positives = 309/394 (78%), Gaps = 4/394 (1%) Query: 17 YKYLVLVLLYLGWCVSYIDRAAITFAATQIASEFALKPSDLGILLSSFFLGYSLLQLPGG 76 Y++ V++LLY+ WC+++IDR ++ A +++E L PS+LG++LS F+ G+ L+QLPGG Sbjct: 7 YRHWVVILLYIAWCIAFIDRVVLSMGAPALSAEMHLSPSELGLVLSVFYFGFWLMQLPGG 66 Query: 77 WLADRYGSRPVIVISILLWSVFTGVTGMAWSITSLVVIRFIFGLGEGAFPAASVKGVAEN 136 WLADRYG++ V++++I WS+FT +TG+AWS+ SL+VIR +FGLGEGAFP+A++K AEN Sbjct: 67 WLADRYGAKVVVIMAIGFWSLFTLLTGLAWSLASLLVIRLLFGLGEGAFPSAAIKNAAEN 126 Query: 137 FSREERPKMSSLLMSSNYIGSMLAPLLIAPLIMHFGWRAVFHTIGIAGLVFALVYWFCVR 196 + E++PK++SLL+SSNYIGSM+APLLIAPL++HF WR F IGI GLVF L+Y VR Sbjct: 127 YHAEQKPKITSLLVSSNYIGSMIAPLLIAPLLLHFHWRHTFMLIGILGLVFVLIYSLTVR 186 Query: 197 --PVRPGKDGPKAINKEAFAALLRMPLMWKIVAVWFGLSIINKGLDSWMPTYLMTVRGLN 254 PV + + IN ++++ PL+WKI AVWFGLS+INKGLDSWMP YLMT R L+ Sbjct: 187 NTPVSDSQQRQR-INLSDVKSVMKHPLLWKIAAVWFGLSLINKGLDSWMPVYLMTERHLD 245 Query: 255 LKAVGLLLPLPYIMAGLSTAIGGWVMVRFFDGREKLLLIASSLLTAVFVYCMYTAVTVEG 314 LKAVG+LLP+PY+MAG++TAIGGWVMV+FF+GRE L+L+ S+L TA+ + CMY A T+ G Sbjct: 246 LKAVGILLPIPYLMAGIATAIGGWVMVKFFNGRENLMLLFSALFTAIAIGCMYRAETLTG 305 Query: 315 VIAWQCLAYFFKSFVLATCIALPTKLLQAQMVGSGVGMVNLGGQLAGFISPLVIGFLVSA 374 VI Q YFFKSFVLA +ALPTK+L +MVGSG+G++N GGQ AGFI+PL IG +V Sbjct: 306 VIVAQAFTYFFKSFVLAIAVALPTKILAPRMVGSGIGVINFGGQAAGFIAPLAIGLMVQH 365 Query: 375 FANYDYAFSFLIGAALFSVLVSLFIRTSKTGGQM 408 F+ + AF FL+GAALFS L+SL IRT KT Q+ Sbjct: 366 FS-FGSAFLFLMGAALFSTLMSLTIRTEKTNTQV 398 >ref|YP_001524937.1| major facilitator superfamily protein [Azorhizobium caulinodans ORS 571] dbj|BAF88019.1| major facilitator superfamily protein [Azorhizobium caulinodans ORS 571] Length = 406 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 220/382 (57%), Positives = 289/382 (75%), Gaps = 2/382 (0%) Query: 22 LVLLYLGWCVSYIDRAAITFAATQIASEFALKPSDLGILLSSFFLGYSLLQLPGGWLADR 81 LLYL +C+SYIDRAA++ A T + EF+LKP +LG +LS FFLGY+++Q+PGGWLADR Sbjct: 15 FALLYLAFCISYIDRAAMSLALTHVGKEFSLKPDELGAVLSIFFLGYAIMQIPGGWLADR 74 Query: 82 YGSRPVIVISILLWSVFTGVTGMAWSITSLVVIRFIFGLGEGAFPAASVKGVAENFSREE 141 +GS+ V++++I WSVFT +T AWS+ SL+ IRFIFGL EG FPAAS+KGV+E ++ Sbjct: 75 FGSKYVVIVTIAAWSVFTILTSQAWSLVSLLAIRFIFGLAEGGFPAASIKGVSELVAKPN 134 Query: 142 RPKMSSLLMSSNYIGSMLAPLLIAPLIMHFGWRAVFHTIGIAGLVFALVYWFCVRPVRPG 201 RPK ++LL SSNY+GSM+APL++APLI+ FGWR F +GIAG+VFA+ Y+ V RP Sbjct: 135 RPKFTALLTSSNYLGSMVAPLIMAPLIISFGWRHAFEIVGIAGVVFAVAYFLAVPYRRPA 194 Query: 202 KDGPKAINKEAFAA--LLRMPLMWKIVAVWFGLSIINKGLDSWMPTYLMTVRGLNLKAVG 259 K L++ PLMW+++ VWFGLS +NKGLDSWMPTYL+ RGL+LKAVG Sbjct: 195 PRAASVNGKARTPVRDLMKNPLMWQLLVVWFGLSCVNKGLDSWMPTYLLQQRGLDLKAVG 254 Query: 260 LLLPLPYIMAGLSTAIGGWVMVRFFDGREKLLLIASSLLTAVFVYCMYTAVTVEGVIAWQ 319 LL P+P++MA +STA+GGWVM RFF REK LL+AS+ LT +F+Y MY A TV GVI +Q Sbjct: 255 LLTPVPFLMATISTAMGGWVMTRFFAQREKYLLMASATLTGIFLYAMYKAETVAGVIFFQ 314 Query: 320 CLAYFFKSFVLATCIALPTKLLQAQMVGSGVGMVNLGGQLAGFISPLVIGFLVSAFANYD 379 L YFFKSFVLAT IALPTK+L +G+G+G+VN+GGQ AG ++P V+G LV++F YD Sbjct: 315 SLVYFFKSFVLATVIALPTKVLADDQIGTGIGIVNVGGQGAGSVAPYVMGVLVASFGVYD 374 Query: 380 YAFSFLIGAALFSVLVSLFIRT 401 AF+FL+ SV+V+ IRT Sbjct: 375 AAFNFLLVMTAMSVVVAATIRT 396 >ref|NP_770942.1| hypothetical protein bll4302 [Bradyrhizobium japonicum USDA 110] dbj|BAC49567.1| bll4302 [Bradyrhizobium japonicum USDA 110] Length = 407 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 216/397 (54%), Positives = 299/397 (75%), Gaps = 5/397 (1%) Query: 20 LVLVLLYLGWCVSYIDRAAITFAATQIASEFALKPSDLGILLSSFFLGYSLLQLPGGWLA 79 + VLLY+ +C+SYIDRAAI+ A QI +F L+ +DLGI++S+FFLGY+ +Q+PGGWL+ Sbjct: 11 IAFVLLYIAYCISYIDRAAISLALAQIGKDFNLQAADLGIVISAFFLGYAAMQVPGGWLS 70 Query: 80 DRYGSRPVIVISILLWSVFTGVTGMAWSITSLVVIRFIFGLGEGAFPAASVKGVAENFSR 139 DR+GS+ V++++I++WS+FT T +AWS+ SL+ IRFIFG+ EG FP AS++ +AE F + Sbjct: 71 DRFGSKYVVIVTIVMWSLFTAFTSLAWSLISLIAIRFIFGIAEGGFPPASIRAIAEVFKK 130 Query: 140 EERPKMSSLLMSSNYIGSMLAPLLIAPLIMHFGWRAVFHTIGIAGLVFALVYW----FCV 195 + RPKMS LL+SSNY GSM+APL++APLI+ GWR F+ IGIAG+VFA+VY+ + Sbjct: 131 DSRPKMSGLLLSSNYAGSMVAPLIMAPLILWLGWRHAFNAIGIAGIVFAVVYFVFVPYLG 190 Query: 196 RPVRPGKDGP-KAINKEAFAALLRMPLMWKIVAVWFGLSIINKGLDSWMPTYLMTVRGLN 254 RP + P KA ++ L++ PL+W+++ VWFGLS +NKGLDSWMP YL+ RGL+ Sbjct: 191 RPGKADAGAPVKAESRAPMRELMKNPLLWQLMVVWFGLSCVNKGLDSWMPLYLLQQRGLD 250 Query: 255 LKAVGLLLPLPYIMAGLSTAIGGWVMVRFFDGREKLLLIASSLLTAVFVYCMYTAVTVEG 314 LK VG+L P+P++MA ++TA+GGWVM FF REK LLI SS LT +F+Y MY + T+ Sbjct: 251 LKTVGVLAPIPFVMATIATAMGGWVMTTFFSEREKYLLIGSSALTGIFLYAMYKSETITM 310 Query: 315 VIAWQCLAYFFKSFVLATCIALPTKLLQAQMVGSGVGMVNLGGQLAGFISPLVIGFLVSA 374 +IA+Q L YFFKSFVLA+ IALPTKLL+ +GSGVGMVNLGGQ AGF++P+ IGF+V+ Sbjct: 311 LIAFQSLVYFFKSFVLASVIALPTKLLRDDQIGSGVGMVNLGGQSAGFVAPVAIGFIVTG 370 Query: 375 FANYDYAFSFLIGAALFSVLVSLFIRTSKTGGQMQPA 411 ++D AF FL+ SV+V+ I T++ QPA Sbjct: 371 TGSFDAAFGFLVAMTALSVVVAATISTAQPKLVAQPA 407