BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1125.p (832 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777698.1| VGR-related type VI secretion system protein... 1410 0.0 ref|YP_003774366.1| VGR-related protein [Herbaspirillum seropedi... 1086 0.0 ref|YP_004226544.1| type VI secretion system Vgr family protein ... 783 0.0 ref|ZP_02909846.1| type VI secretion system Vgr family protein [... 722 0.0 ref|ZP_02380057.1| Rhs element Vgr protein [Burkholderia ubonens... 722 0.0 >ref|YP_003777698.1| VGR-related type VI secretion system protein [Herbaspirillum seropedicae SmR1] gb|ADJ65790.1| VGR-related type VI secretion system protein [Herbaspirillum seropedicae SmR1] Length = 886 Score = 1410 bits (3649), Expect = 0.0, Method: Composition-based stats. Identities = 700/835 (83%), Positives = 755/835 (90%), Gaps = 3/835 (0%) Query: 1 MPSPSQKDSSRSQARITQHRRLLQLDSPLGPDLLLPQRLIATERLNHGYEVTLDLLATRT 60 MPSPS DS RSQARITQHRRLLQLDS LGPD+LLPQRL+ATERLN GYEVT+DLLAT T Sbjct: 1 MPSPSPNDSRRSQARITQHRRLLQLDSSLGPDILLPQRLVATERLNDGYEVTIDLLATHT 60 Query: 61 GIALEQLIAQPVTLWIRQHEGDTLPWHGYVHTAKRLGSDGEIDFCQLSFSPWLHFLRFRK 120 GIALEQLIAQPVTLWIRQH+GDTLP HGYVHTAKRLGSDGE+DFCQLS SPWLHFLRFRK Sbjct: 61 GIALEQLIAQPVTLWIRQHDGDTLPLHGYVHTAKRLGSDGELDFCQLSLSPWLHFLRFRK 120 Query: 121 DARIWQDKTTEDILADVFDGHPQARGHYRFELERPSLARSYCTQYETDWNFVQRLMEEEG 180 DARIWQDK TEDILADVF+ HPQARGHYRF+LERP R YCTQYETDW+FVQRLMEEEG Sbjct: 121 DARIWQDKRTEDILADVFNNHPQARGHYRFQLERPYTPRPYCTQYETDWHFVQRLMEEEG 180 Query: 181 WFAHHEQQEDGGGHALVITDNTFSLPGLPRQGIAFHGAGPRDELDKILQWSASRTLSSKS 240 WFAHHEQ+EDG GH LVITDNT++LPGLP+QGIAFHGA PRDELDKIL WSASRTLSSK Sbjct: 181 WFAHHEQREDGSGHVLVITDNTWNLPGLPQQGIAFHGAAPRDELDKILHWSASRTLSSKG 240 Query: 241 WRGRSDDYKSPRLQKEAEEQVMAEYGLLPAQLEVYEYTGAYSFAQQEQGNRQADLQVEQW 300 WRGRSDDYKSP ++KEAEEQVM EYG LPAQLE+YEYTGAYSF QEQGNRQADLQVEQW Sbjct: 241 WRGRSDDYKSPGMKKEAEEQVMPEYGQLPAQLEMYEYTGAYSFRLQEQGNRQADLQVEQW 300 Query: 301 ESAMQRYSAVSGVRNLACGRWFRLEDHPLHRKEPESDRQFVILAIDWFIENNLPLSHQAL 360 ES+MQRYSAVSGVRNLACGRWFRLE+HP HR EP+ +RQFVILAIDWF+ENNLPLSHQAL Sbjct: 301 ESSMQRYSAVSGVRNLACGRWFRLEEHPQHRAEPDRERQFVILAIDWFVENNLPLSHQAL 360 Query: 361 DFPGSLSAALLAFKESIRRERQVDETENEHTGHCFNRFEVQRRKLPFRPARSHARPVMLP 420 DFPGSL AL+AFKESIRRERQV ET+NEHTGHCFNRFEVQRRKLPFRPAR+HARPVMLP Sbjct: 361 DFPGSLKGALMAFKESIRRERQVAETDNEHTGHCFNRFEVQRRKLPFRPARAHARPVMLP 420 Query: 421 QTAIVVGPAGEEVYTDPLDRIKVQFRWDRINPGNEAASCWVRVSYANAGEYWGAVHVPRI 480 QTAIVVGPA EEVYTD LDRIKVQFRWDRINPGNEAASCWVRVSY NAG+YWGA+ VPRI Sbjct: 421 QTAIVVGPASEEVYTDHLDRIKVQFRWDRINPGNEAASCWVRVSYPNAGQYWGAIQVPRI 480 Query: 481 GQEVIVSFLNGDPDRPVVTGRLFNEEQRPQWHSNGRLSGFKSKEFGGAGFNQLVMDDTSE 540 GQEVIVSFLNGDPDRPVVTGRLFN EQRPQWH+NGRLSG KSKEFGG GFNQ+VMDDT E Sbjct: 481 GQEVIVSFLNGDPDRPVVTGRLFNAEQRPQWHTNGRLSGVKSKEFGGTGFNQMVMDDTPE 540 Query: 541 QNRIHLYSTHTHAQLNLGHLVSQTGNERRHFFGTGFALSTDAYGAIVTHKGLYISTYGRP 600 QNRIHLYST+THAQLNLGHLVSQTGNERR FFG+GFALSTDAYGAIVTHKGLYISTYGRP Sbjct: 541 QNRIHLYSTNTHAQLNLGHLVSQTGNERRSFFGSGFALSTDAYGAIVTHKGLYISTYGRP 600 Query: 601 GAQGTQLDASEATGQLKTASAMSQQLSESAAKADAEALGGLDALGKMIEATQGTYPEAAQ 660 GAQGTQLDA EATGQLK+ + +S+ LSE+AAKA AE L G +AL I+ATQ Y + +Q Sbjct: 601 GAQGTQLDAREATGQLKSGANLSRTLSETAAKAGAEPLAGQEALRDFIDATQADYEDPSQ 660 Query: 661 SEAHRFKQAILLAASPDGIGLTTRKGLHAHAGEEITLSSGSDTSIATGKSLLASVAEKIS 720 ++A+RF+QAILLAASPDGIGLTT KG+H HAG EITLSSG+DTSIA GKSLLASVAEKIS Sbjct: 661 AQANRFQQAILLAASPDGIGLTTPKGVHTHAGGEITLSSGADTSIAVGKSLLASVAEKIS 720 Query: 721 LFAFKAGIKLFSAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFI 780 LFAFKAGIKLFSAKGKVEVQAQSDDL+LIAEKVARLLS SGRVEI AK+EV+I+AGGSFI Sbjct: 721 LFAFKAGIKLFSAKGKVEVQAQSDDLELIAEKVARLLSASGRVEIRAKEEVLITAGGSFI 780 Query: 781 QINASGITQGTAGTWEAKASQHAMTGPARVSYAMPLLPAS---DLNLPKRYPYSQ 832 ++NASGITQGT+G WEAKA HAM GP ++Y M A+ D R+PY Q Sbjct: 781 RLNASGITQGTSGAWEAKAGTHAMPGPTTLAYEMNKSSAALPFDEEFVLRWPYDQ 835 >ref|YP_003774366.1| VGR-related protein [Herbaspirillum seropedicae SmR1] emb|CAM32692.1| VGR-related protein [Herbaspirillum seropedicae] gb|ADJ62458.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 928 Score = 1086 bits (2808), Expect = 0.0, Method: Composition-based stats. Identities = 531/814 (65%), Positives = 654/814 (80%), Gaps = 2/814 (0%) Query: 9 SSRSQARITQHRRLLQLDSPLGPDLLLPQRLIATERLNHGYEVTLDLLATRTGIALEQLI 68 S+ + + Q +R+L+LDS LGPD+LLPQR++ +ERL GY+ T+DL++TR I L++LI Sbjct: 21 SALADTFVGQEKRILKLDSVLGPDVLLPQRMVGSERLGRGYDYTIDLVSTRDDIELKKLI 80 Query: 69 AQPVTLWIRQHEGDTLPWHGYVHTAKRLGSDGEIDFCQLSFSPWLHFLRFRKDARIWQDK 128 AQPVTLW++Q D P HGYVHTA+RLGSDG++ Q+ +PWLHFL++RKDARIWQD Sbjct: 81 AQPVTLWLQQDGSDYAPLHGYVHTARRLGSDGQLASFQIGMAPWLHFLKYRKDARIWQDS 140 Query: 129 TTEDILADVFDGHPQARGHYRFELERPSLARSYCTQYETDWNFVQRLMEEEGWFAHHEQQ 188 +DILADVFD H ARG+YRFE+ P+L RSYCTQYETDW+FVQRLMEEEGW+A+HEQ+ Sbjct: 141 KADDILADVFDQHAYARGNYRFEIVTPALPRSYCTQYETDWHFVQRLMEEEGWYAYHEQK 200 Query: 189 EDGGGHALVITDNTFSLPGLPRQGIAFHGAGPRDELDKILQWSASRTLSSKSWRGRSDDY 248 DG GH LVITDNT L + +AFHGAG +DE+++IL WSASR L+S R+DDY Sbjct: 201 PDGSGHVLVITDNTDQAKPLAPEQLAFHGAGTQDEVNRILHWSASRGLASTRLATRTDDY 260 Query: 249 KSPRLQKEAEEQVMAEYGLLPAQLEVYEYTGAYSFAQQEQGNRQADLQVEQWESAMQRYS 308 KSP QK+ +E+V+ E+G LP +LEVYEY+G YS+A+Q+ G+RQA L+VEQWES+M+R+ Sbjct: 261 KSPGDQKQTQERVLPEHGALPGELEVYEYSGPYSYAKQDDGDRQARLRVEQWESSMKRFM 320 Query: 309 AVSGVRNLACGRWFRLEDHPLHRKEPESDRQFVILAIDWFIENNLPLSHQALDFPGSLSA 368 VSG R LA GRWF L DHP HR + + D QF+++A++WFIENNLPLS A DFPGSL Sbjct: 321 GVSGARTLAAGRWFTLTDHPAHRGDSKQDSQFMLIAVEWFIENNLPLSGTARDFPGSLKP 380 Query: 369 ALLAFKESIRRERQVDETENEHTGHCFNRFEVQRRKLPFRPARSHARPVMLPQTAIVVGP 428 L AFK S+ R D N TGHCFNRFEVQRRKLP+R H +PVM PQTA+VVGP Sbjct: 381 QLDAFKASMGRSND-DAGGNARTGHCFNRFEVQRRKLPYRSPFDHTKPVMHPQTAVVVGP 439 Query: 429 AGEEVYTDPLDRIKVQFRWDRINPGNEAASCWVRVSYANAGEYWGAVHVPRIGQEVIVSF 488 GEEV+TD L+R+KVQFRWDRINPG+E ASCWVRVSY NAGE WG V VPR+GQE+I+SF Sbjct: 440 QGEEVFTDKLNRVKVQFRWDRINPGDEKASCWVRVSYPNAGENWGEVKVPRVGQELIISF 499 Query: 489 LNGDPDRPVVTGRLFNEEQRPQWHSNGRLSGFKSKEFGGAGFNQLVMDDTSEQNRIHLYS 548 LNGDPDRPV TGRLFN+EQ PQWH++GRLSG KSKEFGG GFNQLVMDDT+ QNR+HLYS Sbjct: 500 LNGDPDRPVATGRLFNQEQPPQWHTDGRLSGLKSKEFGGNGFNQLVMDDTTSQNRVHLYS 559 Query: 549 THTHAQLNLGHLVSQTGNERRHFFGTGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLD 608 + ++AQLNLG+LVSQ NERR+F+G+GFALSTD YGA+VT KGLY+S+YGRPG QGTQLD Sbjct: 560 SQSNAQLNLGYLVSQADNERRNFYGSGFALSTDDYGAVVTQKGLYLSSYGRPGPQGTQLD 619 Query: 609 ASEATGQLKTASAMSQQLSESAAKADAEALGGLDALGKMIEATQGTYPEAAQSEAHRFKQ 668 ASEAT +K ++ +++ LS+SA++A AEAL D+L ++AT+ Y Q A+RFK+ Sbjct: 620 ASEATSLMKASADLARGLSDSASRAGAEALAQ-DSLKDFVDATEDKYSGQGQGSANRFKK 678 Query: 669 AILLAASPDGIGLTTRKGLHAHAGEEITLSSGSDTSIATGKSLLASVAEKISLFAFKAGI 728 +L+ A+P GIGL T +G H+ +E TL+SG DTSIA+GKSLLA+V EKISLFA AG+ Sbjct: 679 PLLMMAAPAGIGLATDQGTQVHSAQETTLTSGKDTSIASGKSLLATVKEKISLFAQNAGM 738 Query: 729 KLFSAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFIQINASGIT 788 KLF+AKGKVE+QAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFIQIN++GIT Sbjct: 739 KLFAAKGKVEIQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFIQINSAGIT 798 Query: 789 QGTAGTWEAKASQHAMTGPARVSYAMPLLPASDL 822 QGT G WEAKAS H+M GPA ++ MP + S+L Sbjct: 799 QGTPGKWEAKASLHSMPGPASQNFVMPHVQKSEL 832 >ref|YP_004226544.1| type VI secretion system Vgr family protein [Burkholderia sp. CCGE1001] gb|ADX53484.1| type VI secretion system Vgr family protein [Burkholderia sp. CCGE1001] Length = 929 Score = 783 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 399/819 (48%), Positives = 547/819 (66%), Gaps = 14/819 (1%) Query: 16 ITQHRRLLQLDSPLGPDLLLPQRLIATERLNHGYEVTLDLLATRTGIALEQLIAQPVTLW 75 + Q RLL+LD+PLG ++LLPQRL+ R+ YE TLD+++T GI L++LIAQPVTLW Sbjct: 14 LAQSDRLLKLDTPLGENVLLPQRLVGNSRIGRHYEFTLDVVSTSDGIELKKLIAQPVTLW 73 Query: 76 IRQHEGDTLPWHGYVHTAKRLGSDGEIDFCQLSFSPWLHFLRFRKDARIWQDKTTEDILA 135 ++Q + P HGYVHTA+RLGSD + Q+ FS W+HFLRFRKDARIWQDK+ ++IL Sbjct: 74 MQQSDRSYTPHHGYVHTARRLGSDSALTSYQIEFSSWMHFLRFRKDARIWQDKSVDEILT 133 Query: 136 DVFDGHPQARGHYRFELERPSLARSYCTQYETDWNFVQRLMEEEGWFAHHEQQEDGGGHA 195 DVF+ HPQARG +RF L P RS+C QYE DWNF RLME EG F + EQ EDG H Sbjct: 134 DVFNMHPQARGAFRFTLRNPLPQRSFCVQYEDDWNFCHRLMEAEGVFGYFEQAEDGKSHT 193 Query: 196 LVITDNTFSLPGLPRQGIAFHGAGPRDELDKILQWSASRTLSSKSWRGRSDDYKSPRLQ- 254 LV+TDN L L Q + F+ +G E D +QWS +RTL S + R+ DYK+P Sbjct: 194 LVVTDNLDVLEPLSPQAVEFYRSGTDSETDAFVQWSGTRTLQSTTLTTRTFDYKAPSSAA 253 Query: 255 --KEAEEQVMAEYGLLPAQLEVYEYTGAYSFAQQEQGNRQADLQVEQWESAMQRYSAVSG 312 K + G LP+Q EVYEYTG YS+A+Q +G++ + L++E+WES +R+ + Sbjct: 254 NPKGTTIPTLTTQGNLPSQAEVYEYTGPYSYAEQARGDQLSKLRMEEWESRAKRFQGMGA 313 Query: 313 VRNLACGRWFRLEDHPLHRKEPESDRQFVILAIDWFIENNLPLSHQALDFPGSLSAALLA 372 VR + GRWF L DHP H + +RQF ++ ++W IENNLP+S DFP SL++ L A Sbjct: 314 VRRIDAGRWFELADHPDHSVGSQQERQFAVIGVEWTIENNLPVSSGTTDFPHSLNSTLAA 373 Query: 373 FKESIRRERQVDETENEHTGHCFNRFEVQRRKLPFRPARSHARPVMLPQTAIVVGPAGEE 432 + + + ++ + G E QRR +P+R HA+P M QTA VVGPA +E Sbjct: 374 ARAQYGMQALIIKSSDGSEGFFMASVEAQRRTVPYRSPLEHAKPPMHLQTATVVGPANQE 433 Query: 433 VYTDPLDRIKVQFRWDRINPGNEAASCWVRVSYANAGEYWGAVHVPRIGQEVIVSFLNGD 492 V+TD L+RIKV+ WDR+NPG+E ASCW+RV+++NAG +GAVHVPRIG+EVIVSFL+GD Sbjct: 434 VFTDTLNRIKVRMHWDRLNPGDETASCWMRVAHSNAGGSYGAVHVPRIGEEVIVSFLDGD 493 Query: 493 PDRPVVTGRLFNEEQRPQWHSNGRLSGFKSKEFGGAGFNQLVMDDTSEQNRIHLYSTHTH 552 DRP+VTGRL+N + P WHSNG LSG+KSKE+ G+GFNQ+VMDD + QNRI LYS+ T+ Sbjct: 494 CDRPIVTGRLYNGSKTPDWHSNGILSGYKSKEYHGSGFNQMVMDDATGQNRIQLYSSSTN 553 Query: 553 AQLNLGHLVSQTGNERRHFFGTGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLDASEA 612 AQL+LG+LVSQTGN R + G+GF L +DAYGA+ +GLYIST+ GA LD A Sbjct: 554 AQLHLGYLVSQTGNTRGAYLGSGFDLKSDAYGAVRAGQGLYISTHPTTGAATQPLDVRNA 613 Query: 613 TGQLKTASAMSQQLSESAAKADAEAL-GGLDALGKMIEATQGTYPEAAQSEAHR------ 665 QL ++ ++ + LS+S+ A +L G ++L +ATQ + AA + + Sbjct: 614 NAQLVSSESVMESLSQSSETHQAGSLKDGYESLKAFTDATQNSVSGAADTGGNTAGGGTG 673 Query: 666 ----FKQAILLAASPDGIGLTTRKGLHAHAGEEITLSSGSDTSIATGKSLLASVAEKISL 721 FK+ ++L ASP G +T+K A + I L SG T IA+GKSLLASV EKISL Sbjct: 674 NANVFKEPVILFASPAGFATSTQKSAQISADQHINLVSGQSTHIASGKSLLASVTEKISL 733 Query: 722 FAFKAGIKLFSAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFIQ 781 F +G+KLF+ KGKVE++A SD++++ A+K +LLS S +E+ + +++++GG++I+ Sbjct: 734 FVQNSGMKLFAGKGKVEIRAHSDNVEVTAQKTLKLLSASETIEVASAKGILLTSGGAYIR 793 Query: 782 INASGITQGTAGTWEAKASQHAMTGPARVSYAMPLLPAS 820 I I GT + K SQH+ GPAR++Y++P LP S Sbjct: 794 IEGGNIQIHAPGTVDIKGSQHSFEGPARMNYSLPDLPQS 832 >ref|ZP_02909846.1| type VI secretion system Vgr family protein [Burkholderia ambifaria MEX-5] gb|EDT39018.1| type VI secretion system Vgr family protein [Burkholderia ambifaria MEX-5] Length = 940 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 379/824 (45%), Positives = 533/824 (64%), Gaps = 21/824 (2%) Query: 16 ITQHRRLLQLDSPLGPDLLLPQRLIATERLNHGYEVTLDLLATRTGIALEQLIAQPVTLW 75 + Q R+++LD+P G ++LLP ++ T RL +E+ +D+++ + I L+ LIAQPVTLW Sbjct: 14 LLQSDRIVKLDTPAGRNVLLPHIVVGTARLGGNFEIVVDVVSLQDSIELKSLIAQPVTLW 73 Query: 76 IRQHEGDTLPWHGYVHTAKRLGSDGEIDFCQLSFSPWLHFLRFRKDARIWQDKTTEDILA 135 +Q + P HGYVHTAKRLG+DG + QL+FS WL+FL+FRKDARI+QD+T E IL Sbjct: 74 TQQADKTYRPRHGYVHTAKRLGADGRLVSLQLTFSSWLYFLKFRKDARIFQDQTVETILE 133 Query: 136 DVFDGHPQARGHYRFELERPSLARSYCTQYETDWNFVQRLMEEEGWFAHHEQQEDGGGHA 195 VF GHPQA G YR ++++PS ARS+C QYE DWNFV RLME EGW + E +DG H Sbjct: 134 TVFQGHPQAVGAYRIDVQKPSPARSFCVQYEDDWNFVHRLMESEGWLYYFEHADDGKSHT 193 Query: 196 LVITDNTFSLPGLPRQGIAFHGAGPRDELDKILQWSASRTLSSKSWRGRSDDYKSPRLQK 255 LVITD+ +SL L + + F+ AG + D ++ WS +RTL S S+ + DYK+P +K Sbjct: 194 LVITDDLYSLKPLEPEHVRFYRAGITRQPDALVHWSGTRTLQSTSYSTSTFDYKNPEARK 253 Query: 256 EAEEQVMAEYGLLPAQLEVYEYTGAYSFAQQEQGNRQADLQVEQWESAMQRYSAVSGVRN 315 E +A G LP Q EVYEYTG Y++ +++G+R L++E WES +R+ V+ V + Sbjct: 254 EKSFPTVANQGELPQQAEVYEYTGPYTYLDEDRGDRLTKLKLEDWESRAKRFHGVASVPS 313 Query: 316 LACGRWFRLEDHPLHRKEPESDRQFVILAIDWFIENNLPLSHQALDFPGSLSAALL---- 371 + G WF L DHP H + DR+F ++ W+I NNLP+ + +P SL A L Sbjct: 314 IDVGGWFSLLDHPEHDGDGAEDRKFAVVEATWYIRNNLPIG-ETRPYPHSLDARLAEVRD 372 Query: 372 AFKESIRRERQVDETENEHTGHCFNRFEVQRRKLPFRPARSHARPVMLPQTAIVVGPAGE 431 A +ES D + +E G E QR+K+PFR H +PVM QTA VVGP E Sbjct: 373 AHEESAPAFTVKDASGSE--GFFLVDVEAQRQKVPFRSPFEHRKPVMHLQTATVVGPGNE 430 Query: 432 EVYTDPLDRIKVQFRWDRINPGNEAASCWVRVSYANAGEYWGAVHVPRIGQEVIVSFLNG 491 EVYTD L+RI V+ WDR A+CWVRVSY++ G +G+VHVPR+G+EV + +L G Sbjct: 431 EVYTDALNRILVRMHWDRRE--GVGATCWVRVSYSDTGGGYGSVHVPRVGEEVTIEWLGG 488 Query: 492 DPDRPVVTGRLFNEEQRPQWHSNGRLSGFKSKEFGGAGFNQLVMDDTSEQNRIHLYSTHT 551 D DRP+ TGR++N +P+WHSNG LSGF SKE+GG G+N LVMDD + QNR+ L+S+ Sbjct: 489 DCDRPIATGRVYNGATQPRWHSNGILSGFSSKEYGGNGYNHLVMDDATGQNRLQLFSSQG 548 Query: 552 HAQLNLGHLVSQTGNERRHFFGTGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLDASE 611 + L+LG+L++Q GN R + G+GF L TDAYGAI ++GL+++T+ GA QL+ + Sbjct: 549 SSMLHLGYLIAQDGNVRGSYLGSGFDLRTDAYGAIRANRGLFLTTHPGSGAAHQQLEVRQ 608 Query: 612 ATGQLKTASAMSQQLSESAAKADAEAL-GGLDALGKMIEATQGTYPEAAQ---------- 660 A QL +A + + LS+ ++ AE+L G DAL +AT Q Sbjct: 609 AQQQLTSAHNLVESLSDIGSQHQAESLKAGQDALKAFTDATTDNVQGQDQGSGGRTAGGG 668 Query: 661 -SEAHRFKQAILLAASPDGIGLTTRKGLHAHAGEEITLSSGSDTSIATGKSLLASVAEKI 719 A+ FK+ ILLAASP GI L+T++ +H A E + + SG T IA GKSLLASVAE+I Sbjct: 669 TGAANAFKKPILLAASPVGIALSTQRSVHLGADEHVNVVSGQSTHIAAGKSLLASVAERI 728 Query: 720 SLFAFKAGIKLFSAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSF 779 SLFA AG+KLF+AKGKVE+QAQSD++++ A+K ++LS + +VE+ A V++++GG++ Sbjct: 729 SLFAQNAGMKLFAAKGKVEIQAQSDNIEVTAQKTVKVLSATEKVEVAASQGVLLTSGGAY 788 Query: 780 IQINASGITQGTAGTWEAKASQHAMTGPARVSYAMPLLPASDLN 823 I+I I G + K +QHA +GP + Y +P LP DL+ Sbjct: 789 IRIQGGNIEIHAPGKIDIKGAQHAFSGPTSMPYDLPALPKGDLH 832 >ref|ZP_02380057.1| Rhs element Vgr protein [Burkholderia ubonensis Bu] Length = 965 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 371/822 (45%), Positives = 528/822 (64%), Gaps = 16/822 (1%) Query: 16 ITQHRRLLQLDSP-LGPDLLLPQRLIATERLNHGYEVTLDLLATRTGIALEQLIAQPVTL 74 + Q RLL+ D P L P+ ++P+R + L + VTLD+++ I L+ LIAQP+TL Sbjct: 14 LIQQDRLLKTDIPSLPPNTIVPRRAVTCSELGRDFRVTLDMVSAAGNIELKALIAQPITL 73 Query: 75 WIRQHEGDTLPWHGYVHTAKRLGSDGEIDFCQLSFSPWLHFLRFRKDARIWQDKTTEDIL 134 WI+Q + LP +GY+HTA+RLG+DG + QL++ W+HFL+FR D R WQD + ++I+ Sbjct: 74 WIQQADKSYLPINGYIHTARRLGADGSLSTYQLTYGSWMHFLKFRSDMRYWQDMSADEII 133 Query: 135 ADVFDGHPQARGHYRFELERPSLARSYCTQYETDWNFVQRLMEEEGWFAHHEQQEDGGGH 194 ADVF+ HPQARGH++F L +P RSYC Q ETDWNFV RLME+EG F +Q +DG H Sbjct: 134 ADVFNQHPQARGHFQFALSKPLPQRSYCRQSETDWNFVHRLMEDEGLFGFWQQSKDGNAH 193 Query: 195 ALVITDNTFSLPGLPRQGIAFHGAGPRDELDKILQWSASRTLSSKSWRGRSDDYKSPRLQ 254 V+TDN SL P + + F+ +G E D QW+ SRTL S R+ DYKSP Sbjct: 194 TFVMTDNIHSLDEAPSRRVRFYRSGTGSETDAFTQWAGSRTLQSTLHTTRTFDYKSPSAP 253 Query: 255 KEAEEQVM---AEYGLLPAQLEVYEYTGAYSFAQQEQGNRQADLQVEQWESAMQRYSAVS 311 + A G LP Q EVYEYTGAY+++ Q++G + + +++E+WES +R+ V Sbjct: 254 FNPNGTTLPTRAGQGSLPEQAEVYEYTGAYTYSDQDRGEQLSKVRLEEWESRAKRFFGVG 313 Query: 312 GVRNLACGRWFRLEDHPLHRKEPESDRQFVILAIDWFIENNLPLSHQALDFPGSLSAALL 371 GVR + GR F L DHP H ++PE++R+F + + +IENNLPLS Q +FP SL L Sbjct: 314 GVRGIDAGRRFVLADHPEHDRDPENEREFAAIKVWRYIENNLPLSAQEANFPHSLQGDLA 373 Query: 372 AFKESIRRERQVDETENEHT-GHCFNRFEVQRRKLPFRPARSHARPVMLPQTAIVVGPAG 430 K E + + G E QR +P+R H +P M +TAIVVGP G Sbjct: 374 QAKAGRASEGAFKVAHADGSAGFYLVEVESQRVSVPYRSPFEHEKPAMQLETAIVVGPKG 433 Query: 431 EEVYTDPLDRIKVQFRWDRINPGNEAASCWVRVSYANAGEYWGAVHVPRIGQEVIVSFLN 490 EEVYTD L+RIKV F WDR NPGNE ASCWVRV+ ++ G +G+VHVPR+G+EV+V ++ Sbjct: 434 EEVYTDELNRIKVMFIWDRQNPGNERASCWVRVAQSDTGGGYGSVHVPRVGEEVLVGYVG 493 Query: 491 GDPDRPVVTGRLFNEEQRPQWHSNGRLSGFKSKEFGGAGFNQLVMDDTSEQNRIHLYSTH 550 GD DRP+V R++N +PQWHSNG LSG++SKE+ GAGFN++V+DD + QNR L+S+ Sbjct: 494 GDCDRPIVLHRIYNGAVKPQWHSNGILSGYRSKEYSGAGFNEMVLDDATGQNRARLFSSS 553 Query: 551 THAQLNLGHLVSQTGNERRHFFGTGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLDAS 610 ++ L+LG+L+ Q+GN R + G+GF L TD+YGA+ +GLY++T+ + A LD Sbjct: 554 ANSGLHLGYLIDQSGNARGAYLGSGFDLKTDSYGAVRAGRGLYVTTHPKQ-ANSQPLDVK 612 Query: 611 EATGQLKTASAMSQQLSESAAKADAEALG-GLDALGKMIEATQGTYP---------EAAQ 660 EA QL A ++ LSE + + AE L G DAL K ++ATQ + P Sbjct: 613 EAQQQLVNAESLVDTLSEVSEQHHAEPLKPGYDALKKFVDATQDSVPGAASGGRTAGGGT 672 Query: 661 SEAHRFKQAILLAASPDGIGLTTRKGLHAHAGEEITLSSGSDTSIATGKSLLASVAEKIS 720 A+ FK+ ++L SP GI L+T++ +H A + + L SG T IA+GKSL+ASVA+K+S Sbjct: 673 GNANAFKEPVMLLGSPAGIALSTQQNVHVAADQHLNLVSGRSTHIASGKSLIASVADKLS 732 Query: 721 LFAFKAGIKLFSAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFI 780 LF AG+KLF+ KGKVE+QAQSD++++ A+K ++LS++ VEI A +++++GG++I Sbjct: 733 LFVQNAGMKLFAGKGKVEIQAQSDNVEMTAQKTVKVLSSTATVEIAADKGIVLTSGGAYI 792 Query: 781 QINASGITQGTAGTWEAKASQHAMTGPARVSYAMPLLPASDL 822 +I I G + K +QH GPA +SY +P LP +L Sbjct: 793 RIQGGNIEIHAPGKVDVKGAQHLFNGPANMSYPLPPLPTGEL 834