BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1124.p (750 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001796732.1| hypothetical protein RALTA_B0297 [Cupriavidu... 588 e-166 ref|YP_001862228.1| peptidase M23B [Burkholderia phymatum STM815... 501 e-139 ref|ZP_07677449.1| hydroxyethylthiazole kinase [Ralstonia sp. 5_... 488 e-135 ref|NP_899694.1| hydroxyethylthiazole kinase [Chromobacterium vi... 393 e-107 ref|NP_670659.1| hypothetical protein y3360 [Yersinia pestis KIM... 392 e-106 >ref|YP_001796732.1| hypothetical protein RALTA_B0297 [Cupriavidus taiwanensis LMG 19424] emb|CAP63495.1| Conserved hypothetical protein; putative chitinase [Cupriavidus taiwanensis LMG 19424] Length = 725 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 322/746 (43%), Positives = 432/746 (57%), Gaps = 71/746 (9%) Query: 1 MLISPPFLPPRTAQQSEDEWLDLAMNGDAPGRGAFPVSFNLGWHGGIHLTAPRAGNA-HE 59 MLISPPFLPPR Q+E++WL+ AM+G PG G +PVS+NLGWHGG+HL AP GNA E Sbjct: 1 MLISPPFLPPRVDSQTEEQWLEAAMSGGEPGDGGYPVSYNLGWHGGVHLQAPARGNAGME 60 Query: 60 PVRAIADGTIVFVRPPTKGLPNLPIEHPLMYNGATSDGVVVIRHEAEIGEGEQ----ARV 115 PVRAIADG +V+ R ++ + PL Y G TSDGVVV+RHE EIG Q RV Sbjct: 61 PVRAIADGVVVYRRGSSEPPEAPAPDAPLNYGGRTSDGVVVVRHETEIGAEFQQNIPTRV 120 Query: 116 VFFSVYMHLHDIAQATLLKRFVHRKEIIGQAGYINGEKGRLHVEIICDDANLVRLAGRAA 175 +FFSVYMHLH + R + RK+ IGQAGYI G+ GR+H+EIICDDANL++L GR + Sbjct: 121 IFFSVYMHLHTVRSTVRQGRQILRKDEIGQAGYIKGQPGRIHLEIICDDANLIKLVGRGS 180 Query: 176 DPLSLASDGRNDVIFGETFFLIPAGTPIFDQEPLPHSAQAMTPAPKRKRRAGDEEPDPPV 235 +S SDGR+D +FGE +F + ++ Q P P + D P Sbjct: 181 GFVSKISDGRSDAVFGELYFYLAETVRVYPQRP-----------PLNRPSPSDGSP---- 225 Query: 236 ALTAIHATASDYLVGVRYPGAEGDVARTGEAVVTAYAMDGSRIGAPLPDKDGEAGLYRNA 295 + VG+RY +G + G A VT Y G+ +G L + D E LYR+A Sbjct: 226 -------LGENLFVGLRYAEGDGMQYKRGHAYVTTYRQSGTPLGTALIEPDAEYNLYRDA 278 Query: 296 ARIAKAFPDAQRPAPAAVYELLRFGRVIGPDKLPSPSLPHWRKVPYSEGFGWINLHASNI 355 I+ A+P RPAP+AVYELLRFGR++GPD L +PHWR++ G GW+NL+A + Sbjct: 279 NSISDAYPANARPAPSAVYELLRFGRIVGPDPLVPADVPHWRQIRTPAGTGWVNLNAQGV 338 Query: 356 RIFSDADFPPWKGWRLIDDDTDQDSRCDSRTIRSWLDSNCDGRVQAEEATARLSDPTIAA 415 R FSDADFP W+GW+LI+D D +S C++ I D N DG + A+EA RL P + A Sbjct: 339 RKFSDADFPHWRGWQLIEDTADGNSLCNAPEILGPADFNRDGSITADEAHTRLIAPEVKA 398 Query: 416 RLRRVIARFPTEWESSSIDARWGWLKGCTRENATPLSSTDFDALRAHIKALAFWP----- 470 LRR+I +FPTEW++++IDA WGWLK + N P++ FD LR HI+ALAFW Sbjct: 399 FLRRLICKFPTEWDATAIDASWGWLKTRSPANQNPMTDRQFDRLRGHIEALAFWKEANLQ 458 Query: 471 -----------GGMDLPRVHWHWHPKEFIRQFRKCAWLSAKDLARIYPDE-KYPLKALEA 518 G L R HWH+ P+EF+R FRKC W+S + + +Y D + + + Sbjct: 459 IPQLNADGQITGSEALARTHWHFDPREFVRIFRKCGWMSPLEFSLVYTDAYQKKIGSRLD 518 Query: 519 EGRQRTPASIRETYRNDINKVMRKY-LISSPVRMTHFLGEGAVECNYLVMMAEGSVSFSR 577 R +RE YR +NKV+RKY L +S R+ HFLG+GA E L +M F R Sbjct: 519 TARNALSHEVRERYRTQLNKVVRKYHLNASSYRLAHFLGQGAEESRTLTLM------FER 572 Query: 578 KPTHESFQPEDTGFYTPKAKTDYLYYLTGRLGNIEEHDGPKFRGRGIKQLSGRENYGKYW 637 + +A + LY +GRLGN D ++RGRG+KQL+G+ NY +YW Sbjct: 573 R---------------SEASCNQLY--SGRLGNDLLGDAFRYRGRGMKQLTGKYNYTEYW 615 Query: 638 VYRGWLPPNSFEPSWWNPSRPEKAPRVPDPQRLSINHYNAIDSGGWYWTAGSKDND---F 694 VYRGW+ SF+ SWW + P + +P L+ + Y ID+GGWYW A + Sbjct: 616 VYRGWIARESFDRSWWERRGVVRRPVISNPDVLATDDYAVIDAGGWYWAASPHRGEPHML 675 Query: 695 KTINLQIRSATINETTVQKLAEAING 720 +IN + S V+ + AING Sbjct: 676 SSINRMVNSGRPTRENVRMVTLAING 701 >ref|YP_001862228.1| peptidase M23B [Burkholderia phymatum STM815] gb|ACC75182.1| peptidase M23B [Burkholderia phymatum STM815] Length = 746 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 312/797 (39%), Positives = 432/797 (54%), Gaps = 103/797 (12%) Query: 1 MLISPPFLPPRTAQQSEDEWLDLAMNGDAPGRGAFPVSFNLGWHGGIHLTAPRAGNAHEP 60 MLIS PFL R Q +D + G+ G+GAFPVS WHGGIHL AP +G+ EP Sbjct: 1 MLISLPFL--RAGTQEDDPTQPVTTLGERAGKGAFPVSREFSWHGGIHLDAPGSGDNVEP 58 Query: 61 VRAIADGTIVFVR-----PPTKGLPNLPIEHPLMY-NGATSDGVVVIRHEAEIGEGEQAR 114 VRAIADG +VF R P P + HPL+Y G TS+GVV+++H EIG+ + Sbjct: 59 VRAIADGQVVFARNSDEIPQHSDDPTVIAAHPLLYYAGWTSNGVVILKHTTEIGD--RVN 116 Query: 115 VVFFSVYMHLHDIAQATLLKRFVHRKEIIGQAGYINGEKGRLHVEIICDDANLVRLAGRA 174 V F+S+Y H+H + + K V+RK+ IG G I G+ R+H EI+ D AN+ L GR+ Sbjct: 117 VEFYSIYQHMHKVNVSRGQK--VYRKDRIGSPGAIYGQPNRIHFEIVADAANVAALMGRS 174 Query: 175 ADPLSLASDGRNDVIFGETFFLIPAGTPIFDQEPLPHSAQAMTPAPKRKRRAGDEEPDPP 234 + PL+ A GR + ++G+T ++PAGTP++ +P + A PA + +A P Sbjct: 175 SGPLT-APQGRTNSLWGDTHIVLPAGTPLYATDP--SAITAGHPAWQVPVQATTTAP--- 228 Query: 235 VALTAIHATASDYLVGVRYPGAEGDVARTGEAVVTAYAMDGSRIGAPLPDKDGEAGLYRN 294 A+ I A G +T + G+ +G P+ DG GLY+ Sbjct: 229 -AIVTISEAA-------------------GLITLTTRSTRGTVLGTATPE-DG-YGLYQ- 265 Query: 295 AARIAKAFPDAQRPAPAAVYELLRFGRVIGPD-----KLPSPSLPHWRKV--PYSEGFGW 347 R + +P P+A YE+LRFGRVIGPD L LPH R++ P + Sbjct: 266 --RALQRYPGC----PSAGYEMLRFGRVIGPDAPAAGDLHQGRLPHIRQIRSPVDHTAVY 319 Query: 348 INLHASNIRIFSDADFPPWKGWRLIDDDTDQDSRCDSRTIRSWLD--------------- 392 +L+ +R++SDADFP W GW IDDDTD +SRCDS + LD Sbjct: 320 ADLNGPGVRVYSDADFPDWLGWTYIDDDTDGNSRCDSDVLIDMLDPSAPPAAGQPAPASG 379 Query: 393 --SNCDGRVQAEE-------ATARLSDPTIAARLRRVIARFPTEWESSSIDARWGWLKGC 443 + R QA++ A AR D + RL + + PT+W D RWGW+KG Sbjct: 380 AVAQTPARQQAQKRRERIARAYARSLDGPMRERLSYCVVKMPTDWSRDDFDTRWGWVKG- 438 Query: 444 TRENATP--------LSSTDFDALRAHIKALAFWPG----GMDLPRVHWHWHPKEFIRQF 491 T N P +S + + H ALAFW G+ L ++H+H+HP FI+ F Sbjct: 439 TDPNDLPANVLLTTCMSDEAYTKFKQHHSALAFWEDAQAQGLALDKLHYHFHPGRFIQTF 498 Query: 492 RKCAWLSAKDLARIYPDEKYPLKALEAEGRQRTPASIRETYRNDINKVMRKYLISSPVRM 551 RKC WLS +L+R+YPD +Y + P+ +RE YR +N+V RKY I++ R+ Sbjct: 499 RKCMWLSEAELSRVYPDNQYNHR------ETPDPSGLRERYRKQLNQVTRKYFINTATRL 552 Query: 552 THFLGEGAVECNYLVMMAEGSVSFSRKPTHESFQPEDTGFYTPKAKTDYLYYLTGRLGNI 611 THFLG+GAVE L M E S + H S QPE G+Y T Y YL RLGN+ Sbjct: 553 THFLGQGAVESFSLARMVEASTTH----FHASIQPETDGYYNDLHDT-YFNYLENRLGNV 607 Query: 612 EEHDGPKFRGRGIKQLSGRENYGKYWVYRGWLPPNSFEPSWWNPSRPE-KAPRVPDPQRL 670 + DG K+RGRG+KQL+G NY YWVYRGWL ++++PSWW + + P + DPQR+ Sbjct: 608 DTGDGIKYRGRGMKQLTGLANYASYWVYRGWLDKSTYDPSWWLKTHGHIRKPNIADPQRV 667 Query: 671 SINHYNAIDSGGWYWTAGSKDNDFKTINLQIRSATINETTVQKLAEAINGVNRKTQKPNN 730 S + YN ID+GGWYWTAG+ KTIN I ++ V ++ AING+N T +PN Sbjct: 668 STDPYNCIDTGGWYWTAGATRLQNKTINSVISEGELSHQAVFDVSAAINGINSHTHEPNG 727 Query: 731 LTERINETLWAQNILMD 747 L +R N+TL I++D Sbjct: 728 LGDRENQTLRISKIIVD 744 >ref|ZP_07677449.1| hydroxyethylthiazole kinase [Ralstonia sp. 5_7_47FAA] gb|EFP64182.1| hydroxyethylthiazole kinase [Ralstonia sp. 5_7_47FAA] Length = 761 Score = 488 bits (1257), Expect = e-135, Method: Composition-based stats. Identities = 304/781 (38%), Positives = 405/781 (51%), Gaps = 111/781 (14%) Query: 1 MLISPPFLPPRTAQQSEDEWLDLAMNGDAPGRGAFPVSFNLGWHGGIHLTAPRAGNAH-E 59 MLISPPFLPPR A Q+ED+WL+ AM G PG GA+PVS+NLGWHGG+HLTAP GN+ E Sbjct: 1 MLISPPFLPPRAADQTEDQWLEAAMPGGEPGNGAYPVSYNLGWHGGLHLTAPPRGNSGVE 60 Query: 60 PVRAIADGTIVFVRPPTKGLPNLPIEHPLMYNGATSDGVVVIRHEAEIGEGEQA----RV 115 VRAIADGT+V+ R + PL Y G TSDGVVVIRHE EIG RV Sbjct: 61 LVRAIADGTVVYRRGSAEPPAPPEENAPLNYRGRTSDGVVVIRHETEIGVATTGNAPTRV 120 Query: 116 VFFSVYMHLHDIAQATLLKRFVHRKEIIGQAGYINGEKGRLHVEIICDDANLVRLAGRAA 175 VFFS+YMHLH + R ++RK+ +GQAGYI G ++H EI+CDD NL +L GR + Sbjct: 121 VFFSIYMHLHTVRSTVQQGRRIYRKDELGQAGYIGGRPNQIHFEIVCDDTNLRQLIGRVS 180 Query: 176 DPLSLASDGRNDVIFGETFFLIPAGTPIFDQEPLPHSAQAMTPAPKRKRRAGDEEPDPPV 235 + LA DGR+D IFGE +F + A T +F Q P + +P PP Sbjct: 181 GDVPLAGDGRSDAIFGELYFHLAADTQVFPQHPPLN------------------QPSPPG 222 Query: 236 ALTAIHATASDYLVGVRYPGAEGDVARTGEAVVTAYAMDGSRIGAPLPDKDGEAGLYRNA 295 + VGVRY +G G A VT Y + G +G + + + E R+A Sbjct: 223 GT----PLGEEVFVGVRYAEGDGAQGARGHAYVTTYRLTGLPLGDAVTEAEAEYNRKRDA 278 Query: 296 ARIAKAFPDAQRPAPAAVYELLRFGRVIGPDKLPSPSLPHWRKVPYSEGFGWINLHASNI 355 +I A+P RP+P+AVYELLRFGRVIGPD L +PHWRK+ G GW+NL+A + Sbjct: 279 TQICDAYPANARPSPSAVYELLRFGRVIGPDALSPTDVPHWRKIRTPTGTGWVNLNAQGV 338 Query: 356 RIFSDADFPPWKGWRLIDDDTDQDSRCDSRTIRSWLDSNCDGRVQAEEATARLSDPTIAA 415 R FSDADFP W+GWRL++D DS C I LD + D + AEEA RL P + A Sbjct: 339 RKFSDADFPHWRGWRLVEDAQGGDSLCSDPAILRELDGDHDDTITAEEAHTRLDSPEVKA 398 Query: 416 RLRRVIARFPTEWESSSIDARWGWLKGCTRENATPLSSTDFDALRAHIKALAFW------ 469 L+++I +FPTEWE+++I+ARWGWLK + N P++ F ALRAHI+ALAFW Sbjct: 399 LLKKLICKFPTEWEAATIEARWGWLKQASPTNPEPMTEEQFQALRAHIEALAFWQQANLQ 458 Query: 470 ----------PGGMDLPRVHWHWHPKEFIRQFRKCAWLSAKDLARIYPDEKYPLKALEAE 519 GG LP HW + P+EF+R FR+C WL+A ++AR +P + L Sbjct: 459 VPQYDAQGQPSGGQPLPNAHWRFDPREFVRIFRRCGWLNADEMARCFPR-----RLLHLT 513 Query: 520 GRQRTPASIRETYRN--------DINKVMRKYLIS-SPVRMTHFLGEGAVECNYLVMMAE 570 G Q P S + N+ RKY +S S R+ HF V+ Sbjct: 514 GTQFVPHSTTWNVAHARSIAWVLPFNQATRKYGLSISRQRLLHFFAH--------VIPET 565 Query: 571 GSVSFSRKPTHESFQPEDTGFYTPKAKTDYLYYLTGRLGNIEEHDGPKFRGRGIKQLSGR 630 G++ F ++ ES YTP YY GRG+ QL+ Sbjct: 566 GNLHFVKEINGES------KTYTP-------YY-----------------GRGLIQLTHL 595 Query: 631 ENYGKYWVYRGW---LPPNSFEPSWWNPSRPEKAPRVPDPQRLSINHYNAIDSGGWYWTA 687 ENY Y +R + + F W+P + N YN DS +Y Sbjct: 596 ENYLPYGRFRKFPATVTTGQFSGLGWDPD-----VFIARNNEGDHNAYNCADSACFYVAT 650 Query: 688 GSKDNDFKTINLQIRSATINETTVQKLAEAINGVNRKTQKPNNLTERINETLWAQNILMD 747 + L A + + +++ +NG N + N L R+ L+ +N L+D Sbjct: 651 -------RAGMLSHMDAGVGQDNAVVVSKDVNG-NVSIENLNGLDARLQAVLYLRNALLD 702 Query: 748 D 748 D Sbjct: 703 D 703 >ref|NP_899694.1| hydroxyethylthiazole kinase [Chromobacterium violaceum ATCC 12472] gb|AAQ57704.1| probable hydroxyethylthiazole kinase [Chromobacterium violaceum ATCC 12472] Length = 713 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 252/768 (32%), Positives = 383/768 (49%), Gaps = 108/768 (14%) Query: 1 MLISPPFLPPRTAQQSEDEWLDLAMNGDAPGRGAFPVSFNLGWHGGIHLTAPRAGNAHEP 60 M+ISPP L S+++WL M + RG FP++ + WHGG H+ G EP Sbjct: 1 MIISPPILKMPQGNASDEQWLASLMPFSS--RGGFPIASRMAWHGGQHIEHTDTGAHGEP 58 Query: 61 VRAIADGTIVFVRPPTKGLPNLPIEHPLMYNGATSDGVVVIRHEAEIGEGEQARVVFFSV 120 VR IADGT+V+ R P+ P+ + PL Y G T +G VVI+H EIGEG ++ ++S+ Sbjct: 59 VRTIADGTVVYKRTPS---PDAD-KKPLAYQGETDNGCVVIKHNTEIGEGPDGQIEYYSI 114 Query: 121 YMHLHDIAQATLLKRFVHRKEIIGQAGYINGEKGRLHVEIICDDANLVRLAGRAADPLSL 180 YMHL ++ K+ V+RK+ +G G NG K +H+EIICDDANL ++ GR++ L + Sbjct: 115 YMHLKEVFVKN--KQPVNRKDSLGSVGSCNG-KNAIHLEIICDDANLKKIVGRSSGKLDI 171 Query: 181 ASDGRNDVIFGETFFLIPAGTPIFDQEPLPHSAQAMTPAPKRKRRAGDEEPDPPVALTAI 240 ++DGR+ +++G+ F +P GTP + A +P+ +G + Sbjct: 172 STDGRDKIVYGDMHFYLPPGTPFY----------ASIASPQAPSDSG----------APV 211 Query: 241 HATASDYLVGVRYPGAEGDVARTGEAVVTAYAMDGSRIGAPL--------PDKDGEAGLY 292 H ++ V +R+ G+ ++T D + G + D E LY Sbjct: 212 HTSSVPLFVTMRF--------ERGKCLLTTRQEDPQQEGLYIELDQALTNSDDKYEYNLY 263 Query: 293 RNAARIAKAFPDAQRPAPAAVYELLRFGRVIGPDK---LPSPSLPHWRKVPYSEGFGWIN 349 A + AF AP+A YELLRFGRVI + + + ++PHW KV Y G GW++ Sbjct: 264 SKATSLGDAF----HIAPSAAYELLRFGRVINTENETPIAAGAVPHWHKVNYPGGQGWVD 319 Query: 350 LHASNIRIFSDADFPPWKGWRLIDDDTDQDSRCDSRTIRSWLDSNCDGRVQAEEATARLS 409 L+A I+ FSDADFP W GW LIDDD DS+C+S T+ W+ N ++ A+ TA L Sbjct: 320 LNAVGIKKFSDADFPHWSGWSLIDDDPTPDSQCNSPTLEKWIVGNSGKKLTADALTAALG 379 Query: 410 DPTIAARLRRVIARFPTEWESSSIDARWGWLKGCTRENATPLSSTDFDALRAHIKALAFW 469 D I +RL R I +FPTEWE ID R+ WLK + P++ + + +++AL+FW Sbjct: 380 DTKIQSRLARAICKFPTEWEKGQIDTRYDWLKKKSDVLDEPMTEELYADFKTYVEALSFW 439 Query: 470 -PGGMDLPRVHWHWHPKEFIRQFRKCAWLSAKDLARIYPDEKYPLKALEAEGRQR--TPA 526 G+++ HWH+HP+ F FR+C W+ D+AR+ A+ E + T Sbjct: 440 EEAGLEINNTHWHFHPRLFFSHFRRCGWMGKDDIARLIRKTLPNPSAINREDQNSALTKG 499 Query: 527 SIRETYRN-----------DINKVMRKYLISSPVRMTHFLGEGAVECNYLVMMAEGSVSF 575 +I E +I+ VMRKYLI +P+R++H + + A E L M EG Sbjct: 500 NIYEYLSTANEKRPAQLYPNISTVMRKYLIVTPLRISHLISQLAEETGRLKAMVEGG--- 556 Query: 576 SRKPTHESFQPEDTGFYTPKAKTDYLYYLTGRLGNIEEHDGPKFRGRGIKQLSGRENYGK 635 D+ F + TD +LGN + DG KF+GRG+ QL+GRENY + Sbjct: 557 -----------PDSYFDKYEPGTDQ----GKKLGNTAKGDGKKFKGRGLIQLTGRENYIR 601 Query: 636 YWVYRGWLPPNSFEPSWWNPSRPEKAPRVPDPQRLSINHYNAIDSGGWYWTAGSKDNDFK 695 Y YR + S N S Q L + Y D+ G++W + ++ Sbjct: 602 YGKYR------RIDFSIENQS-----------QTLLTSAYKTCDAAGYFWASKQRNK--- 641 Query: 696 TINLQIRSATINETTVQKLAEA---INGVNRKTQKPNNLTERINETLW 740 IN + + + + + A+ + + T+ N NE W Sbjct: 642 -INEKKKMVPLGDLGINSWADKGADLESSKQVTKCINTAAHHFNEVRW 688 >ref|NP_670659.1| hypothetical protein y3360 [Yersinia pestis KIM 10] ref|NP_994750.1| hypothetical protein YP_3469 [Yersinia pestis biovar Microtus str. 91001] ref|YP_071739.1| hypothetical protein YPTB3244 [Yersinia pseudotuberculosis IP 32953] ref|ZP_01889056.1| hypothetical protein YPE_2295 [Yersinia pestis CA88-4125] ref|ZP_02224288.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. F1991016] ref|ZP_02225870.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. IP275] ref|ZP_02229879.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. E1979001] ref|ZP_02238692.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. B42003004] ref|ZP_02307763.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] ref|ZP_02311264.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] ref|ZP_02316940.1| M23 peptidase domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] ref|ZP_02333928.1| hypothetical protein YpesF_15359 [Yersinia pestis FV-1] ref|YP_002346017.1| hypothetical protein YPO0969 [Yersinia pestis CO92] ref|ZP_04457832.1| hypothetical protein YPS_1597 [Yersinia pestis Pestoides A] ref|ZP_04461051.1| hypothetical protein YPH_3244 [Yersinia pestis biovar Orientalis str. PEXU2] ref|ZP_04462702.1| hypothetical protein YPF_0887 [Yersinia pestis biovar Orientalis str. India 195] ref|ZP_04518905.1| hypothetical protein YP516_3598 [Yersinia pestis Nepal516] ref|ZP_06204650.1| peptidase, M23 family [Yersinia pestis KIM D27] ref|YP_003567514.1| hypothetical protein YPZ3_1342 [Yersinia pestis Z176003] gb|AAM86910.1|AE013937_6 hypothetical [Yersinia pestis KIM 10] gb|AAS63627.1| hypothetical protein YP_3469 [Yersinia pestis biovar Microtus str. 91001] emb|CAH22482.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] emb|CAL19637.1| hypothetical protein YPO0969 [Yersinia pestis CO92] gb|EDM40713.1| hypothetical protein YPE_2295 [Yersinia pestis CA88-4125] gb|EDR33393.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. IP275] gb|EDR36862.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. F1991016] gb|EDR44621.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. E1979001] gb|EDR50429.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. B42003004] gb|EDR58273.1| M23 peptidase domain protein [Yersinia pestis biovar Orientalis str. MG05-1020] gb|EDR59738.1| M23 peptidase domain protein [Yersinia pestis biovar Antiqua str. UG05-0454] gb|EDR65731.1| M23 peptidase domain protein [Yersinia pestis biovar Mediaevalis str. K1973002] gb|EEO75665.1| hypothetical protein YP516_3598 [Yersinia pestis Nepal516] gb|EEO82911.1| hypothetical protein YPF_0887 [Yersinia pestis biovar Orientalis str. India 195] gb|EEO87305.1| hypothetical protein YPH_3244 [Yersinia pestis biovar Orientalis str. PEXU2] gb|EEO91369.1| hypothetical protein YPS_1597 [Yersinia pestis Pestoides A] gb|ACY58216.1| hypothetical protein YPD4_1308 [Yersinia pestis D106004] gb|EFA46857.1| peptidase, M23 family [Yersinia pestis KIM D27] gb|ADE64252.1| hypothetical protein YPZ3_1342 [Yersinia pestis Z176003] gb|ADV97518.1| hypothetical protein YPC_0826 [Yersinia pestis biovar Medievalis str. Harbin 35] gb|AEL70715.1| hypothetical protein A1122_00130 [Yersinia pestis A1122] Length = 740 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 259/756 (34%), Positives = 364/756 (48%), Gaps = 139/756 (18%) Query: 1 MLISPPFLPPRTAQQSEDEWLDLAMNGDAPGRGAFPVSFNLGWHGGIHLTAPRAGNAHEP 60 M+ISPPFL R A QS+ +W+D M R +P++ + WHGGIH+ +G E Sbjct: 1 MIISPPFLRDRDATQSDADWVDAMM--PVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEK 58 Query: 61 VRAIADGTIVFVRPPTKGLPNLPIEHPLMYNG--ATSDGVVVIRHEAEIGEGEQARVVFF 118 VRAIADGT+V R P+K P + PL Y+ T DG V+++HE EIG G+ +VVF+ Sbjct: 59 VRAIADGTVVSFRMPSK--PWERDQFPLKYSPLRGTDDGYVLLKHETEIGSGDDGKVVFY 116 Query: 119 SVYMHLHDIAQATLLKRFVHRKEIIGQAGYINGEKGRLHVEIICDDANLVRLAGRAADPL 178 S+YMHL + ++RK +G +G +G+ H +I CD+AN +L GR L Sbjct: 117 SLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQN-EFHFQIFCDEANTRKLVGRTTGEL 175 Query: 179 SLASDGRNDVIFGETFFLIPAGTPIFDQEPLPHSAQAMTPAPKRKRRAGDEEPDPPVALT 238 ++ GR DV++G+ F +PAGT ++ P + A L Sbjct: 176 NINESGRKDVVYGDIHFYLPAGTKFYEARPSANIATTTN-------------------LN 216 Query: 239 AIHATASDYLVGVRYPGAEGDVARTGEAVVTAYAMDGSRIGAPLPDKDG---EAGLYRNA 295 +H +A + G + T +A A +G+PL + DG E LY+ A Sbjct: 217 EVHTSAVPLYASMSLSKGAGTMI-TRQACANAEGA-FEPVGSPLVNADGKDYEYNLYKTA 274 Query: 296 ARIAKAFPDAQRPAPAAVYELLRFGRVIGPD--KLPSPSLPHWRKVPYSEGFGWINLHAS 353 +P + P+A YELLRFGR+I + L P W V Y G G +NL + Sbjct: 275 T---SRYPQS----PSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVNLAVA 327 Query: 354 NIRIFSDADFPPWKGWRLIDDDTDQDSRCDSRTIRSWLDSNCDGRVQAEEATARLSDPTI 413 ++ FSDADFP W GW+LIDDD D S+C+S IR + + Sbjct: 328 TVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKD-----------------RY 370 Query: 414 AARLRRVIARFPTEWESSSIDARWGWL-KGCTRENATP-------------------LSS 453 AA+ ++I P EWE S+ID R+ WL G E TP ++ Sbjct: 371 AAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESKDRILMNE 430 Query: 454 TDFDALRAHIKALAFWPGGMDLPRVHWHWHPKEFIRQFRKCAWLSAKDLARIYPDEKYPL 513 D+ + H +AL F G + +V WH+ P+ FI FRK WL DL+R+Y Sbjct: 431 EDYGRFKQHAEALCFDSGALGSGKV-WHFDPRGFIENFRKSRWLDEIDLSRVY------- 482 Query: 514 KALEAEGRQRTPASIRETYRNDINKVMRKYLISSPVRMTHFLGEGAVECNYLVMMAEGSV 573 T +RE YR IN ++ KY +++P+R HFLG+GA+E L +M EGSV Sbjct: 483 --------STTAKDVREKYRTSINFILIKYGMNNPIRTAHFLGQGAIESQNLNLMVEGSV 534 Query: 574 SFSRKPTHESFQPEDTGFYTP---------------------------KAKTDYLYYLTG 606 SFSR P H SF E G+Y ++ + L + G Sbjct: 535 SFSRHPDHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRDSRNNLLTVVIG 594 Query: 607 RLGN------------IEEH-----DGPKFRGRGIKQLSGRENYGKYWVYRGWLPPNSFE 649 R N I+ + DG KFRGRG KQL+G NY YW YRGWL ++ Sbjct: 595 RDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYD 654 Query: 650 PSWW-NPSRPEKAPRVPDPQRLSINHYNAIDSGGWY 684 SWW NP+R + P + +PQ +S YN IDSGG + Sbjct: 655 NSWWRNPNR-LRVPLIDNPQNISTEPYNCIDSGGQF 689