BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1119.p (353 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774777.1| 2-ketopantoate reductase [Herbaspirillum ser... 560 e-157 ref|YP_933498.1| 2-dehydropantoate 2-reductase [Azoarcus sp. BH7... 390 e-106 ref|YP_004381988.1| 2-dehydropantoate 2-reductase [Pseudomonas m... 349 5e-94 ref|YP_001340677.1| 2-dehydropantoate 2-reductase [Marinomonas s... 332 4e-89 ref|YP_004314674.1| 2-dehydropantoate 2-reductase [Marinomonas m... 307 2e-81 >ref|YP_003774777.1| 2-ketopantoate reductase [Herbaspirillum seropedicae SmR1] gb|ADJ62869.1| 2-ketopantoate reductase protein [Herbaspirillum seropedicae SmR1] Length = 353 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 305/337 (90%), Positives = 316/337 (93%), Gaps = 3/337 (0%) Query: 1 MRDDS---SKHLAPLRICIAGAGAIGGTLAVRLSAAGHQVSVLARGQTLQAIREHGLTLH 57 M DDS S APLRICIAGAGAIGGTLAVRL+AAGHQVSVLARGQTLQAIREHGLTLH Sbjct: 1 MSDDSISPSAPSAPLRICIAGAGAIGGTLAVRLAAAGHQVSVLARGQTLQAIREHGLTLH 60 Query: 58 DLHGRTHARPTASELPEFGIQDVIFLCAKSQDMSALLPQIAPMVGEETVVIPTNNGVPWW 117 DLHG HARP A P FG+QDVIFLCAKSQDM+ LLPQ+APMVGE TVVIPTNNGVPWW Sbjct: 61 DLHGTAHARPAADHRPSFGVQDVIFLCAKSQDMAGLLPQVAPMVGETTVVIPTNNGVPWW 120 Query: 118 YFHREGGRFDGETVKAVDPEGALSNAVALDRLIGSVLFITAEVESPGVIRSVNPHLMVLG 177 YFHREGGRFDG+TVKAVDPEGAL+ A+ L ++IGSVLFITAEVES GVIRSVNPHLMVLG Sbjct: 121 YFHREGGRFDGQTVKAVDPEGALAAALPLAQIIGSVLFITAEVESAGVIRSVNPHLMVLG 180 Query: 178 EPSGEMSERLMRVRAAVEAAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYG 237 EPSGEMSERL+RVRAAVE+AGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYG Sbjct: 181 EPSGEMSERLLRVRAAVESAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYG 240 Query: 238 LPELREVVSQIMRETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELA 297 LPELREVVSQIMRETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELA Sbjct: 241 LPELREVVSQIMRETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELA 300 Query: 298 AIGDAVLEMAERYVIPMPITRAIVSLARFRGEAAQQQ 334 AIGDAVLEMAERY IPMPITRAIVSLARFRGEAAQQQ Sbjct: 301 AIGDAVLEMAERYAIPMPITRAIVSLARFRGEAAQQQ 337 >ref|YP_933498.1| 2-dehydropantoate 2-reductase [Azoarcus sp. BH72] emb|CAL94611.1| 2-dehydropantoate 2-reductase [Azoarcus sp. BH72] Length = 336 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 201/318 (63%), Positives = 247/318 (77%), Gaps = 2/318 (0%) Query: 13 RICIAGAGAIGGTLAVRLSAAGHQVSVLARGQTLQAIREHGLTLHDLHGRTHARPT-ASE 71 +ICIAGAGAIG T+A RL+ A V+V ARG TL +R G+TL DL G TH P AS+ Sbjct: 8 KICIAGAGAIGCTIAARLAKADMDVTVFARGATLDVLRRDGITLTDLEG-THQVPVRASD 66 Query: 72 LPEFGIQDVIFLCAKSQDMSALLPQIAPMVGEETVVIPTNNGVPWWYFHREGGRFDGETV 131 P+FG+QDVIF+CAK+ D+ A+LP++AP++GE T+V+P NGVPWWYFH EGGRF + V Sbjct: 67 QPDFGVQDVIFVCAKAHDLPAMLPRLAPLIGEHTIVVPAVNGVPWWYFHGEGGRFADQPV 126 Query: 132 KAVDPEGALSNAVALDRLIGSVLFITAEVESPGVIRSVNPHLMVLGEPSGEMSERLMRVR 191 +A DPEG L+ A+ +IG V+FITAE PG + + NPHL++ GEP MSERL + Sbjct: 127 RATDPEGKLAAALPFKHVIGCVVFITAESPQPGHVVARNPHLIMFGEPDNSMSERLRALC 186 Query: 192 AAVEAAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYGLPELREVVSQIMRE 251 A VE GIEAR +RIRDKLWTKIIANISTNPLSVI+ TL++LY PEL+E V IMRE Sbjct: 187 AIVERGGIEARPLERIRDKLWTKIIANISTNPLSVISGATLEELYTQPELQETVVAIMRE 246 Query: 252 TLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELAAIGDAVLEMAERYV 311 LLVA+S+GARV+IDPLTFL LG AMG RTSMLQD E+ RPLELAAIGDAVLE+AER+ Sbjct: 247 VLLVAASYGARVEIDPLTFLDLGAAMGPVRTSMLQDFEKNRPLELAAIGDAVLELAERFG 306 Query: 312 IPMPITRAIVSLARFRGE 329 IPMP+TR +++LARFRG+ Sbjct: 307 IPMPVTRKVIALARFRGK 324 >ref|YP_004381988.1| 2-dehydropantoate 2-reductase [Pseudomonas mendocina NK-01] gb|AEB60236.1| 2-dehydropantoate 2-reductase [Pseudomonas mendocina NK-01] Length = 334 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 188/318 (59%), Positives = 248/318 (77%), Gaps = 1/318 (0%) Query: 11 PLRICIAGAGAIGGTLAVRLSAAGHQVSVLARGQTLQAIREHGLTLHDLHGRTHARPTAS 70 PLR+CIAGAGAIG TLA RL +G VS+LARG+TL A+R++G+ L DL G +AS Sbjct: 6 PLRVCIAGAGAIGCTLAARLVESGQPVSLLARGKTLTALRDNGIQLTDLDGEHRVHVSAS 65 Query: 71 E-LPEFGIQDVIFLCAKSQDMSALLPQIAPMVGEETVVIPTNNGVPWWYFHREGGRFDGE 129 + + G QD++F+C K+ ++ LLP++AP++G +TVV+P NGVPWWYFH GRF Sbjct: 66 DDCRKLGEQDLLFICTKAPALAGLLPELAPLIGPDTVVVPVVNGVPWWYFHGIEGRFARH 125 Query: 130 TVKAVDPEGALSNAVALDRLIGSVLFITAEVESPGVIRSVNPHLMVLGEPSGEMSERLMR 189 V+AVDP G LS ++ L ++G V+FITAE +PGV+RS NPHLM+ GEP+G+MSERL R Sbjct: 126 RVEAVDPGGKLSASLDLRHILGCVVFITAESSAPGVVRSNNPHLMIFGEPNGQMSERLER 185 Query: 190 VRAAVEAAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYGLPELREVVSQIM 249 VRA + A+GIEARAT+RIRD+LWTKIIAN+++NPLSV+T TL+QLYG EL+ VV +I+ Sbjct: 186 VRALIAASGIEARATERIRDQLWTKIIANLTSNPLSVVTGATLEQLYGQAELKTVVGKIL 245 Query: 250 RETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELAAIGDAVLEMAER 309 +ETLL A+++GAR+ DP TF++LG MGA RTSMLQD E+GRPLELAAIGDAV+E+A Sbjct: 246 QETLLTAAAYGARIQFDPQTFMELGAGMGAVRTSMLQDYEQGRPLELAAIGDAVVELAGY 305 Query: 310 YVIPMPITRAIVSLARFR 327 + MP T+ I++LARFR Sbjct: 306 QGLAMPTTQDILALARFR 323 >ref|YP_001340677.1| 2-dehydropantoate 2-reductase [Marinomonas sp. MWYL1] gb|ABR70742.1| 2-dehydropantoate 2-reductase [Marinomonas sp. MWYL1] Length = 327 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 168/316 (53%), Positives = 223/316 (70%), Gaps = 1/316 (0%) Query: 12 LRICIAGAGAIGGTLAVRLSAAGHQVSVLARGQTLQAIREHGLTLHDLHGRTHARPTAS- 70 + ICIAGAGAIG TLA RL+ +G V VLARG TL+ I++ G+ L D+ G AS Sbjct: 1 MNICIAGAGAIGCTLAARLAKSGQNVKVLARGATLETIKKKGIHLTDIEGEHRVDIVASN 60 Query: 71 ELPEFGIQDVIFLCAKSQDMSALLPQIAPMVGEETVVIPTNNGVPWWYFHREGGRFDGET 130 E G QD+IF+C K+ + +L I PM+ E+T+VIP NG+PWWYF GRF + Sbjct: 61 SAEELGQQDLIFVCCKAPALPTMLELITPMLHEKTIVIPVVNGIPWWYFKGIEGRFSDDY 120 Query: 131 VKAVDPEGALSNAVALDRLIGSVLFITAEVESPGVIRSVNPHLMVLGEPSGEMSERLMRV 190 ++A+DPEG++S + + LIG V+FITA SPGV+ S NPHL+V GE +MSERL V Sbjct: 121 IQAIDPEGSVSKLLPQNHLIGCVVFITAFRNSPGVVTSTNPHLIVFGEVDHQMSERLEEV 180 Query: 191 RAAVEAAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYGLPELREVVSQIMR 250 R +E AGIEARATD IRD++WTK+ ANI++NPLSV+T+GTL+QLYG L+ +V +I+ Sbjct: 181 RKVIEDAGIEARATDNIRDQIWTKVAANITSNPLSVVTKGTLEQLYGDKRLKPLVRKILD 240 Query: 251 ETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELAAIGDAVLEMAERY 310 E LLVA+++GAR+ DP TF++LG MGA +TSMLQD E +PLEL AIG AVLE+A + Sbjct: 241 EVLLVAAAYGARIRFDPHTFMELGAGMGAVKTSMLQDYEADQPLELDAIGYAVLELANKV 300 Query: 311 VIPMPITRAIVSLARF 326 IPM T+ ++ L F Sbjct: 301 SIPMTATQQLLDLTHF 316 >ref|YP_004314674.1| 2-dehydropantoate 2-reductase [Marinomonas mediterranea MMB-1] gb|ADZ92838.1| 2-dehydropantoate 2-reductase [Marinomonas mediterranea MMB-1] Length = 325 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 219/325 (67%), Gaps = 3/325 (0%) Query: 12 LRICIAGAGAIGGTLAVRLSAAGHQVSVLARGQTLQAIREHGLTLHDLHGRTHARPTASE 71 ++ICIAGAGAIG LA RL+ Q+ +LARG L I+E G+ L DL G H AS+ Sbjct: 1 MKICIAGAGAIGCALAARLAKVHKQLCLLARGDNLIRIKEQGIHLSDLDGEHHVHVRASD 60 Query: 72 LPEF-GIQDVIFLCAKSQDMSALLPQIAPMVGEETVVIPTNNGVPWWYFHREGGRFDGET 130 F G QD+I +C K+ + +L I PM+ TVVIP NG+PWWYF RF GE Sbjct: 61 DANFLGPQDLILVCTKTMALETILTSIQPMIHSNTVVIPVVNGIPWWYFKGIESRFGGEN 120 Query: 131 VKAVDPEGALSNAVALDRLIGSVLFITAEVESPGVIRSVNPHLMVLGEPSGEMSERLMRV 190 ++A+DP+ L + ++IGSV+F+TA G +++ NPHL+VLGE + EM++RL + Sbjct: 121 IRALDPKDQLETLLPHSQIIGSVIFLTASRVGLGNVKANNPHLIVLGEINHEMTDRLEAI 180 Query: 191 RAAVEAAGIEARATDRIRDKLWTKIIANISTNPLSVITQGTLQQLYGLPELREVVSQIMR 250 R E AGIE+R+TD IRD+LWTK+ AN+++NPLSV+TQ TL+Q+Y P L +V I+ Sbjct: 181 RTVFELAGIESRSTDNIRDQLWTKVAANLTSNPLSVVTQSTLEQIYSDPRLTPLVRSILD 240 Query: 251 ETLLVASSHGARVDIDPLTFLQLGEAMGAFRTSMLQDLERGRPLELAAIGDAVLEMAERY 310 ET+L A++ GA++ DP TF++LG MGA +TSMLQD E G PLE AIG++VLE+A + Sbjct: 241 ETMLTAAAFGAKIRFDPPTFMELGAGMGAIKTSMLQDYEAGLPLETDAIGNSVLELASKM 300 Query: 311 VIPMPITRAIVSLARFRGEAAQQQT 335 + MP T+ I++LA F E QQ++ Sbjct: 301 DLSMPTTKHIINLAEFMSE--QQRS 323