BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1106.p (429 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774766.1| amidase family protein [Herbaspirillum serop... 493 e-137 ref|ZP_03570353.1| amidase [Burkholderia multivorans CGD2M] >gi|... 368 1e-99 ref|YP_373258.1| amidase [Burkholderia sp. 383] >gi|77971235|gb|... 363 2e-98 ref|ZP_03583793.1| amidase [Burkholderia multivorans CGD1] >gi|2... 363 3e-98 ref|YP_001585048.1| amidase [Burkholderia multivorans ATCC 17616... 362 5e-98 >ref|YP_003774766.1| amidase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62858.1| amidase family protein [Herbaspirillum seropedicae SmR1] Length = 388 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 342/388 (88%), Positives = 365/388 (94%) Query: 42 MSNTSARTVPGTGNALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPAQSHAE 101 M+ + RTVPGTGNALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPA +HA+ Sbjct: 1 MNAATPRTVPGTGNALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPASAHAD 60 Query: 102 VVQRLLDAGWQLTARANMHELAYGMTGINDWNGTAVNPQDASRMTGGSSSGSASAVGAGL 161 VV RLL+AGWQ+TARANMHELAYGMTGIN+WNGTAVNPQD + MTGGSSSGSASAVGAGL Sbjct: 61 VVARLLEAGWQITARANMHELAYGMTGINEWNGTAVNPQDPACMTGGSSSGSASAVGAGL 120 Query: 162 VDMSIGSDTGGSIRLPAACCGVIGFKPSFGRVSRAGAYPAVSSLDCVGPFARSMDLIISA 221 VD+SIGSDTGGSIRLPAACCGVIGFKPSFGRVSRAGAYPA+SSLDC+GPF+RSMDLIISA Sbjct: 121 VDVSIGSDTGGSIRLPAACCGVIGFKPSFGRVSRAGAYPALSSLDCLGPFSRSMDLIISA 180 Query: 222 MASIAPGFDRAAATAAAAQARVKLVAVQADPEIAEAVAAAFAASGWQGDVWTPQHMHAAF 281 MASI PGFDRAAA+ AA ARVKLV VQAD EIAEAVAAAFAASGW+G WTPQHM AAF Sbjct: 181 MASITPGFDRAAASTPAAHARVKLVTVQADTEIAEAVAAAFAASGWEGSPWTPQHMQAAF 240 Query: 282 EAGMTLINRETHDAFGHLLGLGKLGADIEKRLSAAAATTDDAVAQAEAVRAAFSAEVDAA 341 +AGMTLINRETHDAFGHLLGLGKLGADIEKRLSAAA+T+D AVA AE VR AFSAE+DAA Sbjct: 241 DAGMTLINRETHDAFGHLLGLGKLGADIEKRLSAAASTSDAAVAHAETVRTAFSAEIDAA 300 Query: 342 LADADALLLPTLPSLPPTLEAIRQGASVLMLSSLVRPFNLSGHPALSIPVPMAGSPLKAG 401 LADADALLLPTLP+LPPTLEAIRQG SVLMLSSLVRPFNLSGHPALSIPVP+AGSPLKAG Sbjct: 301 LADADALLLPTLPALPPTLEAIRQGTSVLMLSSLVRPFNLSGHPALSIPVPIAGSPLKAG 360 Query: 402 LQLVGRKGDDERICALGLHLEQALKQRP 429 LQLVGRKG+DER+CALGLHLEQ LK+ P Sbjct: 361 LQLVGRKGEDERLCALGLHLEQVLKRLP 388 >ref|ZP_03570353.1| amidase [Burkholderia multivorans CGD2M] ref|ZP_03576997.1| amidase [Burkholderia multivorans CGD2] gb|EEE08574.1| amidase [Burkholderia multivorans CGD2] gb|EEE16260.1| amidase [Burkholderia multivorans CGD2M] Length = 374 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 227/360 (63%), Positives = 275/360 (76%) Query: 56 ALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPAQSHAEVVQRLLDAGWQLTA 115 + F LGG GPT+AIKD IDIAG PT S ALADAPPA HA+VV+ LLDAGWQ+ Sbjct: 3 GFIDTFTLGGPGPTIAIKDTIDIAGYPTRAASRALADAPPAAQHADVVRLLLDAGWQIAG 62 Query: 116 RANMHELAYGMTGINDWNGTAVNPQDASRMTGGSSSGSASAVGAGLVDMSIGSDTGGSIR 175 +ANMHELA+GMTGIND+ GT +NPQDASR+ GGSSSGSAS VG G VD ++G+DTGGSIR Sbjct: 63 KANMHELAFGMTGINDYTGTPINPQDASRIPGGSSSGSASLVGLGAVDAALGTDTGGSIR 122 Query: 176 LPAACCGVIGFKPSFGRVSRAGAYPAVSSLDCVGPFARSMDLIISAMASIAPGFDRAAAT 235 PAACCGV G KP+FGRVSR G PA ++LDCVGPFAR MD + + MA+IAPGFDR A Sbjct: 123 GPAACCGVFGLKPTFGRVSRRGVAPAETTLDCVGPFARDMDTLSATMAAIAPGFDRVRAA 182 Query: 236 AAAAQARVKLVAVQADPEIAEAVAAAFAASGWQGDVWTPQHMHAAFEAGMTLINRETHDA 295 A+AA V V V A+P IA A+ A A+G + +HAAF+AG+ +IN ET A Sbjct: 183 ASAAGCTVAQVVVDAEPAIARALRTALDAAGLRTHTLVLDDLHAAFDAGLVVINAETSRA 242 Query: 296 FGHLLGLGKLGADIEKRLSAAAATTDDAVAQAEAVRAAFSAEVDAALADADALLLPTLPS 355 FGHL+ G+LGAD++ RL AAA TT A+ AEAVR F+A++DAAL ADAL+LPTLP+ Sbjct: 243 FGHLVATGRLGADLDARLRAAATTTAAALDAAEAVRVRFTAQIDAALEHADALVLPTLPA 302 Query: 356 LPPTLEAIRQGASVLMLSSLVRPFNLSGHPALSIPVPMAGSPLKAGLQLVGRKGDDERIC 415 LP TL+ R G SV+ +SSL+RPFNLSGHPALS+P+P+ GSPLKAGLQ+VGRKG DE++C Sbjct: 303 LPITLDEARNGVSVIAMSSLIRPFNLSGHPALSVPLPLDGSPLKAGLQIVGRKGADEQVC 362 >ref|YP_373258.1| amidase [Burkholderia sp. 383] gb|ABB12614.1| Amidase [Burkholderia sp. 383] Length = 374 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 229/362 (63%), Positives = 277/362 (76%) Query: 56 ALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPAQSHAEVVQRLLDAGWQLTA 115 + F LGG GPT+AIKD IDIAG PT S ALADAPPA HA+VV+ LLDAGWQ+ Sbjct: 3 GFIDTFTLGGPGPTIAIKDTIDIAGYPTRAASRALADAPPATRHADVVRLLLDAGWQIAG 62 Query: 116 RANMHELAYGMTGINDWNGTAVNPQDASRMTGGSSSGSASAVGAGLVDMSIGSDTGGSIR 175 +ANMHELA+GMTGIND+ GT VNPQDA+R+ GGSSSGSAS VG G VD ++G+DTGGSIR Sbjct: 63 KANMHELAFGMTGINDYTGTPVNPQDATRIPGGSSSGSASLVGLGTVDAALGTDTGGSIR 122 Query: 176 LPAACCGVIGFKPSFGRVSRAGAYPAVSSLDCVGPFARSMDLIISAMASIAPGFDRAAAT 235 PAACCGV G KP+FGRVSR G P ++LDCVGPFAR + +++ MA+IAPGFDR A Sbjct: 123 GPAACCGVAGLKPTFGRVSRRGVSPIETTLDCVGPFARDIRTLVAVMAAIAPGFDRVQAA 182 Query: 236 AAAAQARVKLVAVQADPEIAEAVAAAFAASGWQGDVWTPQHMHAAFEAGMTLINRETHDA 295 A+AA V + V ADP IA A+ AA ASG + M A+F AG+T+IN ET A Sbjct: 183 ASAAGCTVAHITVDADPAIAAALDAAVRASGLRSHAVVLDEMPASFAAGLTVINAETSRA 242 Query: 296 FGHLLGLGKLGADIEKRLSAAAATTDDAVAQAEAVRAAFSAEVDAALADADALLLPTLPS 355 FGHL+ GKLGAD++ RL AAA TT A+ +AEAVR F+A+VDAAL AD L+LPTLP+ Sbjct: 243 FGHLVATGKLGADLDARLRAAATTTPAALKEAEAVRTRFTAQVDAALEHADVLVLPTLPA 302 Query: 356 LPPTLEAIRQGASVLMLSSLVRPFNLSGHPALSIPVPMAGSPLKAGLQLVGRKGDDERIC 415 LP TL+ R G SV+ +SSL+RPFNLSGHPALS+P+P+AGSPLKAGLQ+VGRKG DE++C Sbjct: 303 LPITLQQARDGVSVIAMSSLIRPFNLSGHPALSLPLPLAGSPLKAGLQIVGRKGADEQVC 362 Query: 416 AL 417 A+ Sbjct: 363 AI 364 >ref|ZP_03583793.1| amidase [Burkholderia multivorans CGD1] gb|EEE02236.1| amidase [Burkholderia multivorans CGD1] Length = 374 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 230/360 (63%), Positives = 278/360 (77%) Query: 56 ALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPAQSHAEVVQRLLDAGWQLTA 115 + F LGG GPT+AIKD IDIAG PT S ALADAPPA HA+VV+ LLDAGWQ+ Sbjct: 3 GFIDTFTLGGPGPTIAIKDTIDIAGYPTRAASRALADAPPATQHADVVRLLLDAGWQIAG 62 Query: 116 RANMHELAYGMTGINDWNGTAVNPQDASRMTGGSSSGSASAVGAGLVDMSIGSDTGGSIR 175 +ANMHELA+GMTGIND+ GT +NPQDASR+ GGSSSGSAS VG G+VD ++G+DTGGSIR Sbjct: 63 KANMHELAFGMTGINDYTGTPLNPQDASRIPGGSSSGSASLVGLGVVDAALGTDTGGSIR 122 Query: 176 LPAACCGVIGFKPSFGRVSRAGAYPAVSSLDCVGPFARSMDLIISAMASIAPGFDRAAAT 235 PAACCGV G KP+FGRVSR G PA ++LDCVGPFAR MD + +AMA+IAPGFDR A Sbjct: 123 APAACCGVFGLKPTFGRVSRRGVAPAETTLDCVGPFARDMDTLSAAMAAIAPGFDRVRAA 182 Query: 236 AAAAQARVKLVAVQADPEIAEAVAAAFAASGWQGDVWTPQHMHAAFEAGMTLINRETHDA 295 A+AA V V V A+P IA A+ AA A+ + +HAAF+AG+ +IN ET A Sbjct: 183 ASAAGCTVAQVVVDAEPAIARALRAALDAASLRTHTLVLDDLHAAFDAGLVVINAETSRA 242 Query: 296 FGHLLGLGKLGADIEKRLSAAAATTDDAVAQAEAVRAAFSAEVDAALADADALLLPTLPS 355 FGHL+ G+LGAD++ RL AAA TT A+ AEAVRA F+A+VDAAL ADAL+LPTLP+ Sbjct: 243 FGHLVATGRLGADLDARLRAAATTTAAALDAAEAVRARFTAQVDAALEHADALVLPTLPA 302 Query: 356 LPPTLEAIRQGASVLMLSSLVRPFNLSGHPALSIPVPMAGSPLKAGLQLVGRKGDDERIC 415 LP TL+ R G SV+ +SSL+RPFNLSGHPALS+P+P+ GSPLKAGLQ+VGRKG DE++C Sbjct: 303 LPITLDEARNGVSVIAMSSLIRPFNLSGHPALSVPLPLDGSPLKAGLQIVGRKGADEQVC 362 >ref|YP_001585048.1| amidase [Burkholderia multivorans ATCC 17616] ref|YP_001947839.1| amidase [Burkholderia multivorans ATCC 17616] gb|ABX18756.1| Amidase [Burkholderia multivorans ATCC 17616] dbj|BAG45303.1| amidase [Burkholderia multivorans ATCC 17616] Length = 374 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 231/360 (64%), Positives = 278/360 (77%) Query: 56 ALLSRFHLGGSGPTVAIKDCIDIAGQPTCGGSAALADAPPAQSHAEVVQRLLDAGWQLTA 115 + F LGG GPT+AIKD IDIAG PT S ALADAPPA HA+VV+ LLDAGWQ+ Sbjct: 3 GFIDTFTLGGPGPTIAIKDTIDIAGYPTRAASRALADAPPATQHADVVRLLLDAGWQIAG 62 Query: 116 RANMHELAYGMTGINDWNGTAVNPQDASRMTGGSSSGSASAVGAGLVDMSIGSDTGGSIR 175 +ANMHELA+GMTGIND+ GT +NPQDASR+ GGSSSGSAS VG G VD ++G+DTGGSIR Sbjct: 63 KANMHELAFGMTGINDYTGTPLNPQDASRIPGGSSSGSASLVGLGAVDAALGTDTGGSIR 122 Query: 176 LPAACCGVIGFKPSFGRVSRAGAYPAVSSLDCVGPFARSMDLIISAMASIAPGFDRAAAT 235 PAACCGV G KP+FGRVSR G PA ++LDCVGPFAR MD + +AMA+IAPGFDR A Sbjct: 123 GPAACCGVFGLKPTFGRVSRRGVAPAETTLDCVGPFARDMDTLSAAMAAIAPGFDRVRAA 182 Query: 236 AAAAQARVKLVAVQADPEIAEAVAAAFAASGWQGDVWTPQHMHAAFEAGMTLINRETHDA 295 A+AA V V V A+P IA A+ AA A+G + +HAAF+AG+ +IN ET A Sbjct: 183 ASAAGCTVAQVGVDAEPAIARALRAALDAAGLRTHTLVLDDLHAAFDAGLVVINAETSRA 242 Query: 296 FGHLLGLGKLGADIEKRLSAAAATTDDAVAQAEAVRAAFSAEVDAALADADALLLPTLPS 355 FGHL+ G+LGAD++ RL AAA TT A+ AEAVRA F+A+VDAAL ADAL+LPTLP+ Sbjct: 243 FGHLVATGRLGADLDARLRAAATTTAAALDAAEAVRARFTAQVDAALEHADALVLPTLPA 302 Query: 356 LPPTLEAIRQGASVLMLSSLVRPFNLSGHPALSIPVPMAGSPLKAGLQLVGRKGDDERIC 415 LP TL+ R G SV+ +SSL+RPFNLSGHPALS+P+P+ GSPLKAGLQ+VGRKG DE++C Sbjct: 303 LPITLDEARNGVSVIAMSSLIRPFNLSGHPALSVPLPLDGSPLKAGLQIVGRKGADEQVC 362