BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1099.p (201 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774759.1| MobA-related protein [Herbaspirillum seroped... 224 6e-57 ref|YP_004754550.1| molybdopterin-guanine dinucleotide biosynthe... 142 2e-32 ref|YP_001352458.1| MobA-related protein [Janthinobacterium sp. ... 134 6e-30 ref|YP_004231650.1| hypothetical protein BC1001_5209 [Burkholder... 129 3e-28 ref|YP_003909500.1| hypothetical protein BC1003_4275 [Burkholder... 127 1e-27 >ref|YP_003774759.1| MobA-related protein [Herbaspirillum seropedicae SmR1] gb|ADJ62851.1| MobA-related protein [Herbaspirillum seropedicae SmR1] Length = 205 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 138/193 (71%), Positives = 155/193 (80%) Query: 5 SPPIALLLAAGRGSRFGAHEEKLLQPFVHHDGRPGIVATATAAALLEVMPVLAVAHGEGP 64 SPPIALLLAAGRGSRF A EEKLLQ F HHDGRPG+VATA AAALLEVMPVLAV G G Sbjct: 6 SPPIALLLAAGRGSRFDAREEKLLQAFPHHDGRPGMVATAAAAALLEVMPVLAVVPGPGA 65 Query: 65 LADALRALGCTVCMTGKDEPREMSASLRCGLQQSADASAWLVALADMPRVQPDTVRRLRD 124 LA+ALRA GC VCM REMSASLRCG+Q SA AS WLVALADMP V T+ LRD Sbjct: 66 LAEALRAQGCAVCMPAPASSREMSASLRCGVQHSAQASGWLVALADMPCVDLSTLCLLRD 125 Query: 125 ALAAGASMVVPVMQGRRGNPVGFAQSHLPALLSLQGDRGARALLESPALVEIAVEDAGIF 184 ALAAGA +V PVMQGRRG+PVGF ++HL ALL+L GD+GARALL++ + E+ V D GIF Sbjct: 126 ALAAGAPIVAPVMQGRRGHPVGFGRAHLDALLALHGDQGARALLKTHPVTELEVMDEGIF 185 Query: 185 SDVDTPEDLQRLR 197 +DVDT EDL+R+R Sbjct: 186 ADVDTAEDLRRVR 198 >ref|YP_004754550.1| molybdopterin-guanine dinucleotide biosynthesis protein A [Collimonas fungivorans Ter331] gb|AEK63727.1| Molybdopterin-guanine dinucleotide biosynthesis protein A [Collimonas fungivorans Ter331] Length = 203 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 94/191 (49%), Positives = 120/191 (62%), Gaps = 8/191 (4%) Query: 8 IALLLAAGRGSRF--GAHEEKLLQPFVHHDGRPGIVATATAAALLEVMPVLAVAHGEGP- 64 I LLLAAGRG RF KLLQP DGR V A L +P+ V G+ P Sbjct: 15 IGLLLAAGRGQRFDPSGARSKLLQPLPTADGR--TVLATAAGNLAAALPICVVLRGDAPD 72 Query: 65 LADALRALGCTVCMTGKDEPREMSASLRCGLQQSADASAWLVALADMPRVQPDTVRRLRD 124 LA + A C T D M+ASL CGL+Q+ADA+ W++ALADMP VQ T++ L Sbjct: 73 LAAQVAAYPWLPCATADDG---MAASLVCGLEQTADAAGWIIALADMPYVQAATIQALAS 129 Query: 125 ALAAGASMVVPVMQGRRGNPVGFAQSHLPALLSLQGDRGARALLESPALVEIAVEDAGIF 184 L GA + VP GRRGNPVGF+++HLP LL+LQGD GAR+LL+S +VE+AV+D GI Sbjct: 130 VLRQGADIAVPTCLGRRGNPVGFSRTHLPQLLALQGDHGARSLLQSHPVVEVAVDDPGIH 189 Query: 185 SDVDTPEDLQR 195 D+DT D+++ Sbjct: 190 QDIDTVADIRQ 200 >ref|YP_001352458.1| MobA-related protein [Janthinobacterium sp. Marseille] gb|ABR90198.1| MobA-related protein [Janthinobacterium sp. Marseille] Length = 199 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 85/191 (44%), Positives = 112/191 (58%), Gaps = 9/191 (4%) Query: 8 IALLLAAGRGSRF--GAHEEKLLQPFVHHDGRPGIVATATAAALLEVMP--VLAVAHGEG 63 + +LLAAG+G RF + KLLQ + D V A A LL V+P V + E Sbjct: 10 VGILLAAGKGMRFDPSGAQNKLLQTTMDGD----TVVVAAATTLLAVLPHVTAVVRNAED 65 Query: 64 PLADALRALGCTVCMTGKDEPREMSASLRCGLQQSADASAWLVALADMPRVQPDTVRRLR 123 +A L LGC V + D + M ASL C L+Q+ A+ W++AL DMPRVQ T+ L Sbjct: 66 AVAMELAQLGCKVVVC-PDADQGMGASLVCALEQNRQATGWIIALGDMPRVQTSTIVALA 124 Query: 124 DALAAGASMVVPVMQGRRGNPVGFAQSHLPALLSLQGDRGARALLESPALVEIAVEDAGI 183 + L GA +V P G RGNPVGF HLPALL L GD+GAR+LL++ + ++ V+D GI Sbjct: 125 NELRNGAGIVAPFYHGERGNPVGFGMQHLPALLMLGGDQGARSLLKNHPVTQVEVDDRGI 184 Query: 184 FSDVDTPEDLQ 194 D+DT DLQ Sbjct: 185 HYDIDTAADLQ 195 >ref|YP_004231650.1| hypothetical protein BC1001_5209 [Burkholderia sp. CCGE1001] gb|ADX58590.1| hypothetical protein BC1001_5209 [Burkholderia sp. CCGE1001] Length = 195 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 116/197 (58%), Gaps = 7/197 (3%) Query: 1 MSTLSPPIALLLAAGRGSRFGAH--EEKLLQPFVHHDGRPGIVATATAAALLEVMPVLAV 58 M+ S +LLAAG GSRF H + KLL DG P + A LL V VLAV Sbjct: 1 MAYASLATGILLAAGVGSRFDPHGVQNKLLARL--PDGTP-VAQEAAHRLLLAVPTVLAV 57 Query: 59 AH-GEGPLADALRALGCTVCMTGKDEPREMSASLRCGLQQSADASAWLVALADMPRVQPD 117 G LA L GC V E R M ASL G+Q S DA W+VALADMPR+Q Sbjct: 58 VRPGAEALARLLNDAGCDVAFAPAAE-RGMGASLAAGIQASEDAEGWIVALADMPRIQSS 116 Query: 118 TVRRLRDALAAGASMVVPVMQGRRGNPVGFAQSHLPALLSLQGDRGARALLESPALVEIA 177 T+ + AL GAS+V P G+RG+PVGF +H ALLSL GD GARALL+S ++ + Sbjct: 117 TIEAVARALDGGASLVAPFYAGQRGHPVGFGAAHREALLSLDGDSGARALLKSERVMRLD 176 Query: 178 VEDAGIFSDVDTPEDLQ 194 V+DAGI DVDTPEDL+ Sbjct: 177 VDDAGILRDVDTPEDLR 193 >ref|YP_003909500.1| hypothetical protein BC1003_4275 [Burkholderia sp. CCGE1003] gb|ADN60209.1| hypothetical protein BC1003_4275 [Burkholderia sp. CCGE1003] Length = 195 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 113/197 (57%), Gaps = 7/197 (3%) Query: 1 MSTLSPPIALLLAAGRGSRFGAH--EEKLLQPFVHHDGRPGIVATATAAALLEVMPVLAV 58 M+ S LLLAAG GSRF H + KLL DG P + A A LL V VLAV Sbjct: 1 MAYASLATGLLLAAGVGSRFDPHGLQNKLLARL--PDGTP-VAAEAARRLLLAVPKVLAV 57 Query: 59 AH-GEGPLADALRALGCTVCMTGKDEPREMSASLRCGLQQSADASAWLVALADMPRVQPD 117 G LA L GC V + R M ASL G+Q S DA W+VALADMPR++P Sbjct: 58 VRPGAEALARVLNDAGCDVAFAPAAQ-RGMGASLAAGVQASEDAEGWIVALADMPRIEPS 116 Query: 118 TVRRLRDALAAGASMVVPVMQGRRGNPVGFAQSHLPALLSLQGDRGARALLESPALVEIA 177 T+ L AL GA +V P G+RG+PVGF H ALLSL GD GAR+LL S L + Sbjct: 117 TIEALARALDGGAGLVAPFYAGQRGHPVGFGAVHRDALLSLDGDSGARSLLASERLTRLD 176 Query: 178 VEDAGIFSDVDTPEDLQ 194 V+D GI DVDTPEDL+ Sbjct: 177 VDDPGILRDVDTPEDLR 193