BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1098.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774744.1| oxidoreductase, molybdopterin-binding protei... 499 e-139 ref|YP_003607267.1| oxidoreductase molybdopterin binding protein... 416 e-114 ref|YP_001888664.1| molybdopterin binding oxidoreductase [Burkho... 412 e-113 ref|ZP_06842750.1| oxidoreductase molybdopterin binding [Burkhol... 411 e-113 ref|YP_553564.1| oxidoreductase, molybdopterin-binding protein [... 411 e-113 >ref|YP_003774744.1| oxidoreductase, molybdopterin-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ62836.1| oxidoreductase, molybdopterin-binding protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 243/261 (93%), Positives = 249/261 (95%), Gaps = 3/261 (1%) Query: 1 MKDKEDIKPPRPEKAGKILLADHRPALLNVQRRLMLRSALSVGALSMLSGCDLQDNDSVD 60 MKDK+D P+ EK ILLADHRPAL+ VQRRLMLRSALS+GALSMLSGCDLQDNDSVD Sbjct: 1 MKDKDDKHAPKTEK---ILLADHRPALVQVQRRLMLRSALSLGALSMLSGCDLQDNDSVD 57 Query: 61 KVLWAMSRWNDRVQALLFRSQKLAPTYAASQITNPFPFNAFYDEFNAPDIDGSDWKLEVS 120 KVLWAMSRWNDRVQALLFRS KLAPTYAASQIT+PFPFNAFYDEFNAPDIDGSDWKLEVS Sbjct: 58 KVLWAMSRWNDRVQALLFRSHKLAPTYAASQITHPFPFNAFYDEFNAPDIDGSDWKLEVS 117 Query: 121 GLVSDKRSWNLERLRALPQAAQITRHICIEGWSAIGQWSGVPLSLFLQAVGADLTAKYVG 180 GLVSDKRSW LERLRALPQA QITRHICIEGWSAIGQWSGVPL LFLQAVGADLTA+YVG Sbjct: 118 GLVSDKRSWTLERLRALPQAGQITRHICIEGWSAIGQWSGVPLRLFLQAVGADLTARYVG 177 Query: 181 FKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIF 240 FKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIF Sbjct: 178 FKCADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIF 237 Query: 241 VSNQNPGGYWEDQGYNWFSGI 261 VSNQNPGGYWEDQGYNWFSGI Sbjct: 238 VSNQNPGGYWEDQGYNWFSGI 258 >ref|YP_003607267.1| oxidoreductase molybdopterin binding protein [Burkholderia sp. CCGE1002] gb|ADG17756.1| oxidoreductase molybdopterin binding protein [Burkholderia sp. CCGE1002] Length = 268 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 196/259 (75%), Positives = 222/259 (85%), Gaps = 6/259 (2%) Query: 3 DKEDIKPPRPEKAGKILLADHRPALLNVQRRLMLRSALSVGALSMLSGCDLQDNDSVDKV 62 + ED + PR I+LA+HRP + +QRRL LRS+LS+GAL+MLSGC+LQDNDSVDKV Sbjct: 16 NTEDARRPR------IVLAEHRPQIEQLQRRLFLRSSLSIGALAMLSGCNLQDNDSVDKV 69 Query: 63 LWAMSRWNDRVQALLFRSQKLAPTYAASQITNPFPFNAFYDEFNAPDIDGSDWKLEVSGL 122 LWAMSRWNDRVQA LF KLAPTYAA IT+PFPFNAFY EF+APDIDGS ++LEVSGL Sbjct: 70 LWAMSRWNDRVQAWLFNRNKLAPTYAARDITDPFPFNAFYPEFDAPDIDGSTFRLEVSGL 129 Query: 123 VSDKRSWNLERLRALPQAAQITRHICIEGWSAIGQWSGVPLSLFLQAVGADLTAKYVGFK 182 V+DKRSW+LERLR LPQ +QITRH+CIEGWSAIGQWSGVP FLQ +GADL+A+YVGFK Sbjct: 130 VADKRSWSLERLRTLPQVSQITRHVCIEGWSAIGQWSGVPFRTFLQLIGADLSARYVGFK 189 Query: 183 CADRYYSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIFVS 242 CADRYYSSLDM TALHPQT L LDF LP +YGYPLK+RVPTKLGFKNPKH+ AIFV+ Sbjct: 190 CADRYYSSLDMATALHPQTQLTLDFRNAPLPAKYGYPLKLRVPTKLGFKNPKHIAAIFVT 249 Query: 243 NQNPGGYWEDQGYNWFSGI 261 N NPGGYWEDQGYNWFSG+ Sbjct: 250 NTNPGGYWEDQGYNWFSGL 268 >ref|YP_001888664.1| molybdopterin binding oxidoreductase [Burkholderia phytofirmans PsJN] gb|ACD19294.1| oxidoreductase molybdopterin binding [Burkholderia phytofirmans PsJN] Length = 258 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 193/254 (75%), Positives = 221/254 (87%) Query: 8 KPPRPEKAGKILLADHRPALLNVQRRLMLRSALSVGALSMLSGCDLQDNDSVDKVLWAMS 67 KP R + I+LADH+P + +QRRL LRS+LS+GAL+MLSGC++QD DSVDKVLWAMS Sbjct: 5 KPNRDARRSPIVLADHQPQIERLQRRLFLRSSLSIGALAMLSGCNMQDGDSVDKVLWAMS 64 Query: 68 RWNDRVQALLFRSQKLAPTYAASQITNPFPFNAFYDEFNAPDIDGSDWKLEVSGLVSDKR 127 RWNDRVQ LF KLAPTY+A +IT+PFPFNAFY EF+A DIDGS ++LEVSGLVSDKR Sbjct: 65 RWNDRVQGWLFDRNKLAPTYSAREITDPFPFNAFYPEFDALDIDGSTYQLEVSGLVSDKR 124 Query: 128 SWNLERLRALPQAAQITRHICIEGWSAIGQWSGVPLSLFLQAVGADLTAKYVGFKCADRY 187 +WNL++LRALPQA+QITRHICIEGWSAIGQWSGVP FL+ VGADL+A+YVGFKCADRY Sbjct: 125 TWNLDQLRALPQASQITRHICIEGWSAIGQWSGVPFRTFLERVGADLSARYVGFKCADRY 184 Query: 188 YSSLDMPTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIFVSNQNPG 247 YSSLDM TALHPQT L LDF E LP +YGYPLK+RVPTKLGFKNPKH+ AIFV+N NPG Sbjct: 185 YSSLDMATALHPQTQLTLDFRNEPLPAKYGYPLKLRVPTKLGFKNPKHIAAIFVTNTNPG 244 Query: 248 GYWEDQGYNWFSGI 261 GYWEDQGYNWFSG+ Sbjct: 245 GYWEDQGYNWFSGL 258 >ref|ZP_06842750.1| oxidoreductase molybdopterin binding [Burkholderia sp. Ch1-1] gb|EFG69709.1| oxidoreductase molybdopterin binding [Burkholderia sp. Ch1-1] Length = 258 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 190/248 (76%), Positives = 217/248 (87%) Query: 14 KAGKILLADHRPALLNVQRRLMLRSALSVGALSMLSGCDLQDNDSVDKVLWAMSRWNDRV 73 + +I+LADH+P + +QRRL LRS+LS+GAL+MLSGC++QD DSVDKVLWAMS WNDRV Sbjct: 11 RKSRIVLADHQPQIERLQRRLFLRSSLSIGALAMLSGCNMQDGDSVDKVLWAMSHWNDRV 70 Query: 74 QALLFRSQKLAPTYAASQITNPFPFNAFYDEFNAPDIDGSDWKLEVSGLVSDKRSWNLER 133 Q LF KLAPTY+A QIT+PFPFNAFY EF+APDIDGS ++LEVSGLVSDKRSWNL++ Sbjct: 71 QGWLFDRNKLAPTYSARQITDPFPFNAFYPEFDAPDIDGSTYQLEVSGLVSDKRSWNLDQ 130 Query: 134 LRALPQAAQITRHICIEGWSAIGQWSGVPLSLFLQAVGADLTAKYVGFKCADRYYSSLDM 193 LRALPQ +QITRHICIEGWSAIGQW GVP FL+ VGADL+A+YVGFKCADRYYSSLDM Sbjct: 131 LRALPQVSQITRHICIEGWSAIGQWRGVPFRTFLERVGADLSARYVGFKCADRYYSSLDM 190 Query: 194 PTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIFVSNQNPGGYWEDQ 253 TALHPQT L LDF E LP +YGYPLK+RVPTKLGFKNPKH+ AIFV+N NPGGYWEDQ Sbjct: 191 ATALHPQTQLTLDFRNEPLPAKYGYPLKLRVPTKLGFKNPKHIAAIFVTNTNPGGYWEDQ 250 Query: 254 GYNWFSGI 261 GYNWFSG+ Sbjct: 251 GYNWFSGL 258 >ref|YP_553564.1| oxidoreductase, molybdopterin-binding protein [Burkholderia xenovorans LB400] gb|ABE34214.1| oxidoreductase, molybdopterin-binding protein [Burkholderia xenovorans LB400] Length = 258 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 190/248 (76%), Positives = 218/248 (87%) Query: 14 KAGKILLADHRPALLNVQRRLMLRSALSVGALSMLSGCDLQDNDSVDKVLWAMSRWNDRV 73 + +I+LADH+P + +QRRL LRS+LS+GAL+MLSGC++QD DSVDKVLWAMSRWNDRV Sbjct: 11 RKSRIVLADHQPQIERLQRRLFLRSSLSIGALAMLSGCNMQDGDSVDKVLWAMSRWNDRV 70 Query: 74 QALLFRSQKLAPTYAASQITNPFPFNAFYDEFNAPDIDGSDWKLEVSGLVSDKRSWNLER 133 Q LF KLAPTY+A +IT+PFPFNAFY EF+APDIDGS ++LEVSGLVSDKRSWNL++ Sbjct: 71 QGWLFDRNKLAPTYSAREITDPFPFNAFYPEFDAPDIDGSTYQLEVSGLVSDKRSWNLDQ 130 Query: 134 LRALPQAAQITRHICIEGWSAIGQWSGVPLSLFLQAVGADLTAKYVGFKCADRYYSSLDM 193 LRALPQ +QITRHICIEGWSAIGQW GVP FL+ VGADL+A+YVGFKCADRYYSSLDM Sbjct: 131 LRALPQVSQITRHICIEGWSAIGQWRGVPFRTFLERVGADLSARYVGFKCADRYYSSLDM 190 Query: 194 PTALHPQTILALDFGKEALPTQYGYPLKVRVPTKLGFKNPKHVVAIFVSNQNPGGYWEDQ 253 TALHPQT L LDF E LP +YGYPLK+RVPTKLGFKNPKH+ AIFV+N NPGGYWEDQ Sbjct: 191 ATALHPQTQLTLDFRNEPLPAKYGYPLKLRVPTKLGFKNPKHIAAIFVTNTNPGGYWEDQ 250 Query: 254 GYNWFSGI 261 GYNWFSG+ Sbjct: 251 GYNWFSGL 258