BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1091.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_295674.1| putative signal peptide [Ralstonia eutropha JMP... 229 3e-58 ref|YP_002231699.1| putative alcohol dehydrogenase [Burkholderia... 226 4e-57 ref|YP_934348.1| hypothetical protein azo2845 [Azoarcus sp. BH72... 222 4e-56 dbj|BAC15558.1| QbdB [Pseudomonas putida] 214 2e-53 ref|YP_932717.1| hypothetical protein azo1213 [Azoarcus sp. BH72... 214 2e-53 >ref|YP_295674.1| putative signal peptide [Ralstonia eutropha JMP134] gb|AAZ60830.1| conserved hypothetical protein; putative signal peptide [Ralstonia eutropha JMP134] Length = 306 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 12/274 (4%) Query: 34 IATDPGDYAALPAGANLALLYGQHTERNSNYANGNRTAGDFRLVTDIGLARFVHFMQVGD 93 I D GDY ALPAG NL LLY QH R+ YA GN+ AG L +D+G+ R+VHFM +G Sbjct: 40 IDVDAGDYTALPAGTNLGLLYYQHVARDRIYAGGNQVAGG-SLDSDVGILRYVHFMDIGG 98 Query: 94 YTIDPQIIIPFGKV---DLQTAFGPLKPVSASGVGDPLVGGTLWLLNQQQQQRWLGVSAF 150 +T+DPQ ++PFGK+ D +A G SASGVGD ++ T+WL+NQ +++++ G++ F Sbjct: 99 FTVDPQFLLPFGKLRGSDNLSALG-----SASGVGDLILAATVWLVNQPEKKQYFGITPF 153 Query: 151 VAVPAGNYDGSKGPVNVGENRWKGIFQLGYVTALPANFMLDVIGEYAVYGDNTNF--LGL 208 + VP G+YD K P+N+GENRWK Q GY+ L LD++ + V+G+NT F Sbjct: 154 LYVPVGSYDKDK-PLNLGENRWKFALQAGYIAPLAQKVTLDLVADVTVFGNNTKFGPASA 212 Query: 209 KREQDASYGLQTHLRYMFSPTTSLALSWYQDFGGATRLNGVAQNDRMNNGRLQAGFSTFV 268 QDA Q LRY F+ + FGG T +NGV++NDR N + GF+ F Sbjct: 213 TLRQDALAQGQAWLRYHFTDAFDIRGGLSYAFGGETSVNGVSRNDRANTSKFSIGFAWFP 272 Query: 269 APTVQLMVQYGQSIKVENGAKESNRINLRIAKVF 302 APTVQ++ YGQ I V NG E+NR N+R+ KVF Sbjct: 273 APTVQVLGTYGQDISVRNGPMENNRFNVRLLKVF 306 >ref|YP_002231699.1| putative alcohol dehydrogenase [Burkholderia cenocepacia J2315] emb|CAR52892.1| putative alcohol dehydrogenase [Burkholderia cenocepacia J2315] Length = 291 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 114/276 (41%), Positives = 166/276 (60%), Gaps = 8/276 (2%) Query: 29 AAAAEIATDPGDYAALPAGANLALLYGQHTERNSNYANGNRTAGDFRLVTDIGLARFVHF 88 A+A + TDP DY ALP G NLALLY QH + Y++GNR F + +DIG+ARF+H+ Sbjct: 22 ASAVVLETDPADYVALPQGVNLALLYYQHANSTAAYSSGNRVDQPFHVQSDIGIARFIHY 81 Query: 89 MQVGDYTIDPQIIIPFGKVDLQTAFGPLKPVS--ASGVGDPLVGGTLWLLNQQQQQRWLG 146 ++ +T+ PQII+PFG V + +P S ++G+GDP VG +WL+N QR+L Sbjct: 82 GKLFGFTVTPQIILPFGSVRMS------EPASLRSNGIGDPFVGSAIWLINDPASQRYLS 135 Query: 147 VSAFVAVPAGNYDGSKGPVNVGENRWKGIFQLGYVTALPANFMLDVIGEYAVYGDNTNFL 206 ++AFV++P G YD ++G +N+G +RW + L Y + LDV GE+A Y N ++ Sbjct: 136 LAAFVSLPLGTYDANQGGLNIGAHRWSEVTHLNYSQRVYGPLFLDVTGEFAFYSTNHDYA 195 Query: 207 GLKREQDASYGLQTHLRYMFSPTTSLALSWYQDFGGATRLNGVAQNDRMNNGRLQAGFST 266 G + Q ++ LQTHLRY T +A S+Y GG T L+G + ++ F+ Sbjct: 196 GQRYWQAPTFDLQTHLRYEIDSRTRVAFSYYHTAGGRTELDGNGASGSLSTDTYLVTFAR 255 Query: 267 FVAPTVQLMVQYGQSIKVENGAKESNRINLRIAKVF 302 F+ PT Q+ +Q GQ I V NG K R+NLR+AK F Sbjct: 256 FLTPTFQVQLQAGQDIHVSNGPKNKLRLNLRMAKAF 291 >ref|YP_934348.1| hypothetical protein azo2845 [Azoarcus sp. BH72] emb|CAL95461.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 309 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 121/281 (43%), Positives = 169/281 (60%), Gaps = 7/281 (2%) Query: 24 FSAGCAAAAEIATDPGDYAALPAGANLALLYGQHTERNSNYANGNRTAGDFRLVTDIGLA 83 F +G A A ++ D GDY ALPAG NLAL+Y QH R++ YA G++ D LV+D+G+ Sbjct: 34 FGSGNAVAVDV--DAGDYTALPAGTNLALVYYQHATRDALYARGHKAPIDAGLVSDVGIL 91 Query: 84 RFVHFMQVGDYTIDPQIIIPFGKVDLQTAFGPLKPVSASGVGDPLVGGTLWLLNQQQQQR 143 R VH+ ++G Y +DPQ ++PFG++ + L SA GVGD ++ T+WL+N+ + Sbjct: 92 RGVHYTEIGGYIVDPQFLLPFGRLQGKDDLSGLG--SARGVGDLILAATVWLVNRPETGT 149 Query: 144 WLGVSAFVAVPAGNYDGSKGPVNVGENRWKGIFQLGYVTALPANFMLDVIGEYAVYGDNT 203 + G++ F+ P G+YD +N+GENRWK Q G++T L LD+IG+ VYG N Sbjct: 150 YFGITPFLFAPTGSYDRDDA-LNLGENRWKFALQAGFITKLAPKVSLDLIGDVTVYGKND 208 Query: 204 NF--LGLKREQDASYGLQTHLRYMFSPTTSLALSWYQDFGGATRLNGVAQNDRMNNGRLQ 261 + +QD S LQ LRY S L FGG TR+NGV QNDRM + Sbjct: 209 AYGATSATLKQDPSVQLQGFLRYHLSDAWDLRAGVSHTFGGETRVNGVDQNDRMETTKAM 268 Query: 262 AGFSTFVAPTVQLMVQYGQSIKVENGAKESNRINLRIAKVF 302 G + FV P+VQLM YG+ + V +G +E NRINLR+ KVF Sbjct: 269 LGTAWFVTPSVQLMANYGRDLSVRSGLREDNRINLRLLKVF 309 >dbj|BAC15558.1| QbdB [Pseudomonas putida] Length = 307 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 119/297 (40%), Positives = 175/297 (58%), Gaps = 9/297 (3%) Query: 12 RRALLAAASALTFS-AGC--AAAAEIATDPGDYAALPAGANLALLYGQHTERNSNYANGN 68 RR +L A A T AGC + A + D GDY ALP G NL ++Y QH ER S Y+ G+ Sbjct: 14 RRTVLGWAQAWTLGLAGCLGSQAHAVDVDAGDYTALPEGTNLGMVYYQHAERRSLYSGGH 73 Query: 69 RTAGDFRLVTDIGLARFVHFMQVGDYTIDPQIIIPFGKVD-LQTAFGPLKPVSASGVGDP 127 + L +DIG+ R VHFM++G +TIDPQ ++PFG+++ + GP K S G+GD Sbjct: 74 KQPVRAGLNSDIGILRGVHFMKLGGFTIDPQFLLPFGQLEGKRNTSGPGK--SDGGIGDL 131 Query: 128 LVGGTLWLLNQQQQQRWLGVSAFVAVPAGNYDGSKGPVNVGENRWKGIFQLGYVTALPAN 187 ++ T+WL+ + +++ + G++ F+ VP G YD +N+GENRWK Q GY+ L Sbjct: 132 ILASTVWLVERPEEKTYFGITPFLYVPTGRYDRDDA-LNIGENRWKFALQAGYIQGLSDK 190 Query: 188 FMLDVIGEYAVYG--DNTNFLGLKREQDASYGLQTHLRYMFSPTTSLALSWYQDFGGATR 245 + LD+IG+ +G D+ GL Q A Y Q LRY +P+ L + + + +GG TR Sbjct: 191 WWLDLIGDVTWFGKNDDATSAGLTLRQSALYQGQAFLRYQLTPSLDLRVGYSRLWGGETR 250 Query: 246 LNGVAQNDRMNNGRLQAGFSTFVAPTVQLMVQYGQSIKVENGAKESNRINLRIAKVF 302 L+GV Q+D+ + G FV P QL+ YG+ VENG KE +R N+R+ +VF Sbjct: 251 LDGVDQHDKPVTAKFLVGAGWFVTPKTQLLFNYGRDQSVENGFKEGDRFNVRLMQVF 307 >ref|YP_932717.1| hypothetical protein azo1213 [Azoarcus sp. BH72] emb|CAL93830.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 312 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 107/268 (39%), Positives = 162/268 (60%), Gaps = 5/268 (1%) Query: 37 DPGDYAALPAGANLALLYGQHTERNSNYANGNRTAGDFRLVTDIGLARFVHFMQVGDYTI 96 D GD LP G NLA+LY QH ER+ Y +G+R G RL +DIG+ARFVH+ + TI Sbjct: 48 DAGDDTPLPEGTNLAVLYYQHVERDRLYVDGDRVPGRNRLDSDIGIARFVHYTKFAGMTI 107 Query: 97 DPQIIIPFGKVDLQTAFGPLKPVSASGVGDPLVGGTLWLLNQQQQQRWLGVSAFVAVPAG 156 +PQ ++PFG + + PL SASGVGD ++ WL+ + + + ++ +V +P G Sbjct: 108 NPQFLLPFGNLHAKGDLSPLG--SASGVGDLILASVFWLVEKPETNTYFAITPYVYLPTG 165 Query: 157 NYDGSKGPVNVGENRWKGIFQLGYVTALPANFMLDVIGEYAVYGDNTNF--LGLKREQDA 214 +YD ++ +N+GENRWKG QLGY+T L +LD+ + V+G+N ++ +QD Sbjct: 166 SYDKNEA-LNLGENRWKGTLQLGYITGLTDKLLLDLYADVTVFGNNNDYGPTSATLKQDP 224 Query: 215 SYGLQTHLRYMFSPTTSLALSWYQDFGGATRLNGVAQNDRMNNGRLQAGFSTFVAPTVQL 274 Y +Q LRY + + ++ +GG T++NGV+ +DR N + Q G + F P+ Q+ Sbjct: 225 LYQVQGWLRYKLTDAWDVRAGYFYTWGGETKVNGVSGDDRQRNTKYQVGTAWFYEPSAQV 284 Query: 275 MVQYGQSIKVENGAKESNRINLRIAKVF 302 + YGQ I VE+G +E NR+N R KVF Sbjct: 285 VFTYGQDISVESGFRERNRLNFRWLKVF 312