BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1082.p (270 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774634.1| nitrate transporter ATPase [Herbaspirillum s... 511 e-143 ref|YP_001098777.1| nitrate ABC transporter ATP-binding protein ... 446 e-123 ref|YP_001352172.1| nitrate transport system ATP-binding protein... 433 e-119 ref|YP_004754619.1| nitrate ABC transporter ATP-binding protein ... 428 e-118 ref|YP_001020587.1| NO3-/NO2- ABC transporter [Methylibium petro... 412 e-113 >ref|YP_003774634.1| nitrate transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62726.1| ABC-type nitrate transporter, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 272 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 254/270 (94%), Positives = 266/270 (98%) Query: 1 MDNINGKFIDIHGVEMVFHTRKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG 60 MDNINGKFIDIHGVEM+FHT+KGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG Sbjct: 3 MDNINGKFIDIHGVEMLFHTKKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG 62 Query: 61 LLKPSDGVLLCANREIGGPAPERAVVFQNHSLLPWLTCYENIYLGVERVFGASENRTQLR 120 LLKPS+GVLLCANREIGGPAPERAVVFQNHSLLPWL+CYENIYLGVERVFGA+ENRTQLR Sbjct: 63 LLKPSEGVLLCANREIGGPAPERAVVFQNHSLLPWLSCYENIYLGVERVFGATENRTQLR 122 Query: 121 DRTRAALALVGLTAAESKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 180 DRTRAALALVGL+AAE+KRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH Sbjct: 123 DRTRAALALVGLSAAENKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 182 Query: 181 LQDELLKIVAKTESTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEIVEVKLPRPRDRVA 240 LQDELLKIVAKT+STVVMVTHDVDEAVLLSDRIVMMTNGPAATIGE++EVKL RPRDRV Sbjct: 183 LQDELLKIVAKTDSTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEVLEVKLARPRDRVV 242 Query: 241 LAQDAQYGAYRTAVLEFLYRKQAHPARDAA 270 LAQD +YG YRTAVLEFLYRKQAHPAR+AA Sbjct: 243 LAQDPEYGQYRTAVLEFLYRKQAHPAREAA 272 >ref|YP_001098777.1| nitrate ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] emb|CAL60648.1| Nitrate transport ATP-binding protein nrtD [Herminiimonas arsenicoxydans] Length = 271 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 221/270 (81%), Positives = 242/270 (89%) Query: 1 MDNINGKFIDIHGVEMVFHTRKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG 60 MDNINGKFIDI EM FHT+KGVF+AL +INLTVAKGEF+TLIGHSGCGKSTLLNLIAG Sbjct: 1 MDNINGKFIDIQHAEMSFHTKKGVFNALTDINLTVAKGEFITLIGHSGCGKSTLLNLIAG 60 Query: 61 LLKPSDGVLLCANREIGGPAPERAVVFQNHSLLPWLTCYENIYLGVERVFGASENRTQLR 120 L + + G+LLC NREI GP+PERAVVFQNHSLLPWLTCYEN+YL VERVFG E + +LR Sbjct: 61 LTQSTGGMLLCGNREIAGPSPERAVVFQNHSLLPWLTCYENVYLAVERVFGKVEGKAKLR 120 Query: 121 DRTRAALALVGLTAAESKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 180 RTRAAL+LVGLT AE KRPNEISGGMKQRVGIARAL+MEPKVLLMDEPFGALDALTRAH Sbjct: 121 ARTRAALSLVGLTHAEQKRPNEISGGMKQRVGIARALSMEPKVLLMDEPFGALDALTRAH 180 Query: 181 LQDELLKIVAKTESTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEIVEVKLPRPRDRVA 240 LQDELLKIVA T STVVMVTHDVDEAVLLSD+IVM+TNGP+ATIGEI+EVKL PR+RVA Sbjct: 181 LQDELLKIVAATGSTVVMVTHDVDEAVLLSDKIVMLTNGPSATIGEILEVKLAHPRERVA 240 Query: 241 LAQDAQYGAYRTAVLEFLYRKQAHPARDAA 270 LA+DAQY YRTAVLEFLY +Q+HPA A Sbjct: 241 LAKDAQYSEYRTAVLEFLYHRQSHPAAKEA 270 >ref|YP_001352172.1| nitrate transport system ATP-binding protein [Janthinobacterium sp. Marseille] gb|ABR88765.1| nitrate transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 268 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 213/266 (80%), Positives = 238/266 (89%) Query: 1 MDNINGKFIDIHGVEMVFHTRKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG 60 MD+IN KFIDI EM F T+KG+F+AL +NLTV+KGEF+TLIGHSGCGKSTLLNLIAG Sbjct: 1 MDSINSKFIDIQHAEMSFSTKKGIFNALTNVNLTVSKGEFITLIGHSGCGKSTLLNLIAG 60 Query: 61 LLKPSDGVLLCANREIGGPAPERAVVFQNHSLLPWLTCYENIYLGVERVFGASENRTQLR 120 L + + G+LLC NREI GP+PERAVVFQNHSLLPWLTCYEN+YL VERVF A+E++ +L+ Sbjct: 61 LTQATGGMLLCGNREIAGPSPERAVVFQNHSLLPWLTCYENVYLAVERVFSATESKAELK 120 Query: 121 DRTRAALALVGLTAAESKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 180 RTRAALALVGL+ AE KRPNEISGGMKQRVGIARAL+MEPKVLLMDEPFGALDALTRAH Sbjct: 121 ARTRAALALVGLSHAEQKRPNEISGGMKQRVGIARALSMEPKVLLMDEPFGALDALTRAH 180 Query: 181 LQDELLKIVAKTESTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEIVEVKLPRPRDRVA 240 LQDELLKIVA T STVVMVTHDVDEAVLLSDRIVM+TNGP+ATIGEI+EVKL RPR+RV Sbjct: 181 LQDELLKIVAATGSTVVMVTHDVDEAVLLSDRIVMLTNGPSATIGEILEVKLARPRERVM 240 Query: 241 LAQDAQYGAYRTAVLEFLYRKQAHPA 266 LAQD Y YRTAVLEFLY +Q+HPA Sbjct: 241 LAQDPLYSQYRTAVLEFLYHRQSHPA 266 >ref|YP_004754619.1| nitrate ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK63796.1| Nitrate ABC transporter, ATP-binding protein [Collimonas fungivorans Ter331] Length = 270 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 225/270 (83%), Positives = 245/270 (90%) Query: 1 MDNINGKFIDIHGVEMVFHTRKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAG 60 M+ + KFIDIH EMVF T KG FHALR+INLTV KGEFVTLIGHSGCGKSTLLNLIAG Sbjct: 1 MEQRDAKFIDIHQAEMVFSTSKGQFHALRDINLTVRKGEFVTLIGHSGCGKSTLLNLIAG 60 Query: 61 LLKPSDGVLLCANREIGGPAPERAVVFQNHSLLPWLTCYENIYLGVERVFGASENRTQLR 120 LL PS+GVL+CA REIGGP+PERAVVFQNHSLLPWLTC+ENIYLGVERVF A+EN++ L+ Sbjct: 61 LLLPSEGVLICAGREIGGPSPERAVVFQNHSLLPWLTCHENIYLGVERVFAATENKSALK 120 Query: 121 DRTRAALALVGLTAAESKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 180 +R +AALA+VGLTAA KRP+EISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH Sbjct: 121 ERAKAALAMVGLTAAGQKRPHEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAH 180 Query: 181 LQDELLKIVAKTESTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEIVEVKLPRPRDRVA 240 LQDELLKIVAKT STVVMVTHDVDEAVLLSDRIVMMTNGPAATIG+IV+V+L RPR+RVA Sbjct: 181 LQDELLKIVAKTGSTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGDIVQVRLARPRERVA 240 Query: 241 LAQDAQYGAYRTAVLEFLYRKQAHPARDAA 270 LAQD Y YRT+VLEFLYRKQAHP AA Sbjct: 241 LAQDPLYAEYRTSVLEFLYRKQAHPVAQAA 270 >ref|YP_001020587.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] gb|ABM94352.1| NO3-/NO2- ABC transporter [Methylibium petroleiphilum PM1] Length = 266 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 207/263 (78%), Positives = 230/263 (87%) Query: 8 FIDIHGVEMVFHTRKGVFHALREINLTVAKGEFVTLIGHSGCGKSTLLNLIAGLLKPSDG 67 FI++ EMVF TRKG FHALREINL + +GEF+TLIGHSGCGKSTLLNLIAGLL PS G Sbjct: 4 FIEVQNAEMVFTTRKGRFHALREINLQIERGEFITLIGHSGCGKSTLLNLIAGLLTPSSG 63 Query: 68 VLLCANREIGGPAPERAVVFQNHSLLPWLTCYENIYLGVERVFGASENRTQLRDRTRAAL 127 VLLC NREI P PERAVVFQNHSLLPWLTCYEN++LGVERVFGASE++ QL++RT+AAL Sbjct: 64 VLLCDNREIAAPGPERAVVFQNHSLLPWLTCYENVHLGVERVFGASESKEQLKERTQAAL 123 Query: 128 ALVGLTAAESKRPNEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAHLQDELLK 187 ALVG++ A +KRP+EISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAHLQDELLK Sbjct: 124 ALVGMSHAIAKRPHEISGGMKQRVGIARALAMEPKVLLMDEPFGALDALTRAHLQDELLK 183 Query: 188 IVAKTESTVVMVTHDVDEAVLLSDRIVMMTNGPAATIGEIVEVKLPRPRDRVALAQDAQY 247 IVA+T STVVMVTHDVDEAVLLSDR+VMMTNGPAATIGEI+ V L RPR RV LA+D Y Sbjct: 184 IVARTRSTVVMVTHDVDEAVLLSDRVVMMTNGPAATIGEILTVDLARPRLRVELAEDPAY 243 Query: 248 GAYRTAVLEFLYRKQAHPARDAA 270 YR VL+FLY + H R+AA Sbjct: 244 VHYRKEVLDFLYTRHGHVEREAA 266