BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1069.p         (70 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774621.1| hypothetical protein Hsero_1196 [Herbaspiril...    93   1e-17
ref|YP_001100771.1| hypothetical protein HEAR2524 [Herminiimonas...    84   9e-15
ref|YP_001022098.1| hypothetical protein Mpe_A2910 [Methylibium ...    81   4e-14
ref|YP_159884.1| hypothetical protein ebB174 [Aromatoleum aromat...    80   7e-14
ref|YP_004754075.1| hypothetical protein CFU_3428 [Collimonas fu...    80   1e-13

>ref|YP_003774621.1| hypothetical protein Hsero_1196 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62713.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 70

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 67/70 (95%), Positives = 68/70 (97%)

Query: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLAGRVQEAYGVSKDEAEKQIRD 60
          MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQL GRVQEAYGVSKDEAEKQIRD
Sbjct: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLVGRVQEAYGVSKDEAEKQIRD 60

Query: 61 WEDRNKDLRQ 70
          +EDRNKD RQ
Sbjct: 61 FEDRNKDWRQ 70


>ref|YP_001100771.1| hypothetical protein HEAR2524 [Herminiimonas arsenicoxydans]
 emb|CAL62650.1| Conserved hypothetical protein, putative stress response protein
          [Herminiimonas arsenicoxydans]
          Length = 72

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLAGRVQEAYGVSKDEAEKQIRD 60
          MNWD++EGNWKQ KG  KEQWGKLTDD LD IAGKRDQL G++QEAYGV+KDEAEKQI+ 
Sbjct: 1  MNWDVIEGNWKQLKGSVKEQWGKLTDDHLDTIAGKRDQLVGKIQEAYGVNKDEAEKQIKA 60

Query: 61 WEDRNKD 67
          +E+RN+D
Sbjct: 61 FEERNRD 67


>ref|YP_001022098.1| hypothetical protein Mpe_A2910 [Methylibium petroleiphilum PM1]
 gb|ABM95863.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 79

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/67 (77%), Positives = 58/67 (86%)

Query: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLAGRVQEAYGVSKDEAEKQIRD 60
          MNWD +EGNWKQ KGKAKEQWGKLTDDD DVIAG+RDQLAG++QE YGV+KDEAEKQ+  
Sbjct: 1  MNWDRIEGNWKQLKGKAKEQWGKLTDDDFDVIAGRRDQLAGKIQERYGVAKDEAEKQVSS 60

Query: 61 WEDRNKD 67
          WE   KD
Sbjct: 61 WERSAKD 67


>ref|YP_159884.1| hypothetical protein ebB174 [Aromatoleum aromaticum EbN1]
 emb|CAI08983.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 67

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLAGRVQEAYGVSKDEAEKQIRD 60
          MNWD +EGNWKQFKG  K+QWGKLTDD LDVIAG+RD+LAGR+QE+YG+SKDEAEKQI D
Sbjct: 1  MNWDRIEGNWKQFKGNVKQQWGKLTDDQLDVIAGRRDELAGRIQESYGISKDEAEKQIAD 60

Query: 61 WEDRNKD 67
          WE R KD
Sbjct: 61 WEARQKD 67


>ref|YP_004754075.1| hypothetical protein CFU_3428 [Collimonas fungivorans Ter331]
 gb|AEK63252.1| hypothetical protein CFU_3428 [Collimonas fungivorans Ter331]
          Length = 69

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MNWDIVEGNWKQFKGKAKEQWGKLTDDDLDVIAGKRDQLAGRVQEAYGVSKDEAEKQIRD 60
          MNWD ++GNWKQFKG  KEQWGKLTDDDLD IAGKRDQLAGR+QEAYG+ KDE EKQIR+
Sbjct: 1  MNWDTIQGNWKQFKGNVKEQWGKLTDDDLDRIAGKRDQLAGRIQEAYGIEKDEVEKQIRE 60

Query: 61 WEDRNKD 67
          +E R KD
Sbjct: 61 FEKRQKD 67