BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1060.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774738.1| benzoate membrane transport protein [Herbasp... 551 e-155 ref|YP_001629990.1| benzoate membrane transport protein [Bordete... 469 e-130 ref|YP_001898943.1| benzoate transporter [Ralstonia pickettii 12... 399 e-109 ref|ZP_03698430.1| benzoate transporter [Lutiella nitroferrum 20... 398 e-109 ref|ZP_07676778.1| benzoate transport protein [Ralstonia sp. 5_7... 398 e-108 >ref|YP_003774738.1| benzoate membrane transport protein [Herbaspirillum seropedicae SmR1] gb|ADJ62830.1| benzoate membrane transport protein [Herbaspirillum seropedicae SmR1] Length = 396 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 354/389 (91%), Positives = 373/389 (95%) Query: 1 MVQRQGSLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQSQLVSWVWGISMGAGVSGLL 60 MVQRQGSLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQ+QLVSWVWGISMGAGVSGLL Sbjct: 8 MVQRQGSLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQAQLVSWVWGISMGAGVSGLL 67 Query: 61 LSWWFRMPIITAWSAPGTALLLSLFPGVGMPEVVGAYLMAAVILIVIGVTGCFEKILAFI 120 LS WFR+PIITAWSAPGTALLLSLFPG+ MPEVVGAYLMAAV+LI+IGVTG FEKILAFI Sbjct: 68 LSGWFRLPIITAWSAPGTALLLSLFPGISMPEVVGAYLMAAVLLILIGVTGYFEKILAFI 127 Query: 121 PKGIAAGMMAGILFQFGVQAFRSSVGAPLMVFAMLAAYLAGRRWWPRYGIVVVALTGFAV 180 PKGIAAGMMAGIL QFG+QAFRSSV APLMV AMLAAYLAGRRWWPRYGIVVVALTGFAV Sbjct: 128 PKGIAAGMMAGILLQFGLQAFRSSVAAPLMVAAMLAAYLAGRRWWPRYGIVVVALTGFAV 187 Query: 181 AFASGRTELSALHLELAQPVFIAPHFSVGMFFSLTVPLVLVSLTGQFLPGMAVLQLAGYH 240 AFASG+T L AL L+LA+PVFIAPHFSVG+FFSLTVPLVLVSLTGQFLPGMAVLQLAGYH Sbjct: 188 AFASGQTALGALQLQLAEPVFIAPHFSVGVFFSLTVPLVLVSLTGQFLPGMAVLQLAGYH 247 Query: 241 PPTRAVVTGTALASLLTACFGGITIVLAAITAALCTGKDAHPEPGRRYIAGIANGVFYLI 300 P TRAVVTGT LASL TACFGGITIVLAAITA+LCTGKDAHP+PG+RYIAGIANGVFYLI Sbjct: 248 PSTRAVVTGTGLASLATACFGGITIVLAAITASLCTGKDAHPDPGKRYIAGIANGVFYLI 307 Query: 301 GGTFAASIVTLFAAFPKELIAALAGLALIGAIVSNIRLMSEDGSHAEPAVITFLATASGM 360 GGTFAASIVTLF AFPKELIAALAGLALIGAIVSNIRLMSE+G + EP+VITFLATASGM Sbjct: 308 GGTFAASIVTLFTAFPKELIAALAGLALIGAIVSNIRLMSEEGDYVEPSVITFLATASGM 367 Query: 361 TLFGLGAAFWGVVIGMAAHWLIGRPAQKK 389 TLFGLGAAFWGV++GMAA+WLIGRP QKK Sbjct: 368 TLFGLGAAFWGVMVGMAAYWLIGRPVQKK 396 >ref|YP_001629990.1| benzoate membrane transport protein [Bordetella petrii DSM 12804] emb|CAP41720.1| benzoate membrane transport protein [Bordetella petrii] Length = 393 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 294/386 (76%), Positives = 333/386 (86%) Query: 4 RQGSLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQSQLVSWVWGISMGAGVSGLLLSW 63 + SLTAWVAGFLAVLISYAGPLVIF+QAA AG + +L SW+W IS+GAGVSGLLLSW Sbjct: 4 KHRSLTAWVAGFLAVLISYAGPLVIFIQAAQAGHISNVELTSWIWAISIGAGVSGLLLSW 63 Query: 64 WFRMPIITAWSAPGTALLLSLFPGVGMPEVVGAYLMAAVILIVIGVTGCFEKILAFIPKG 123 W ++P+ITAWSAPGTALLLSLFP + MPEVVGAYL AA I+I IGVTG FEKI+AFIPKG Sbjct: 64 WLKLPVITAWSAPGTALLLSLFPDISMPEVVGAYLTAAAIVIAIGVTGYFEKIVAFIPKG 123 Query: 124 IAAGMMAGILFQFGVQAFRSSVGAPLMVFAMLAAYLAGRRWWPRYGIVVVALTGFAVAFA 183 IAAGMMAGILFQFGVQAFR+SV P++ FAMLAAYL +R WPRY IV+VALTGFAVAFA Sbjct: 124 IAAGMMAGILFQFGVQAFRASVDMPIVFFAMLAAYLISKRLWPRYAIVIVALTGFAVAFA 183 Query: 184 SGRTELSALHLELAQPVFIAPHFSVGMFFSLTVPLVLVSLTGQFLPGMAVLQLAGYHPPT 243 G T L AL LELA+PVF+ P F++G+F S TVPLVLVSLTGQ+LPGMAVLQLAGY P+ Sbjct: 184 MGTTHLQALGLELARPVFVVPQFNIGVFLSFTVPLVLVSLTGQYLPGMAVLQLAGYRVPS 243 Query: 244 RAVVTGTALASLLTACFGGITIVLAAITAALCTGKDAHPEPGRRYIAGIANGVFYLIGGT 303 RAVV GT LASLLTACFGGITIVLAAITAALCTG+DAH +PG+RYIAGIANGVFYLIGG Sbjct: 244 RAVVAGTGLASLLTACFGGITIVLAAITAALCTGRDAHADPGKRYIAGIANGVFYLIGGA 303 Query: 304 FAASIVTLFAAFPKELIAALAGLALIGAIVSNIRLMSEDGSHAEPAVITFLATASGMTLF 363 FA +IV +F AFP LIAALAGLALIGAI+SNIR++ + ++ EP+VITFLATASGMTLF Sbjct: 304 FAGTIVQVFTAFPSALIAALAGLALIGAIISNIRILVSEDAYVEPSVITFLATASGMTLF 363 Query: 364 GLGAAFWGVVIGMAAHWLIGRPAQKK 389 GLGAAFWGVV GMA++WL +P K Sbjct: 364 GLGAAFWGVVFGMASYWLFAQPQGAK 389 >ref|YP_001898943.1| benzoate transporter [Ralstonia pickettii 12J] gb|ACD26511.1| benzoate transporter [Ralstonia pickettii 12J] Length = 398 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 244/382 (63%), Positives = 301/382 (78%), Gaps = 1/382 (0%) Query: 7 SLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQSQLVSWVWGISMGAGVSGLLLSWWFR 66 SL+A AGFLAVLISYAGPLVIF QAA A VP + + SWVW IS+GA VSG+ SW ++ Sbjct: 18 SLSAVAAGFLAVLISYAGPLVIFFQAAQAAHVPDAMVASWVWAISIGAAVSGIYASWRWK 77 Query: 67 MPIITAWSAPGTALLLSLFPGVGMPEVVGAYLMAAVILIVIGVTGCFEKILAFIPKGIAA 126 P++TAWSAPGTALL+SLFPG+ + E VGAY+ AAV++++IGV+G F++++ IPKGIAA Sbjct: 78 APVVTAWSAPGTALLVSLFPGLSLNEAVGAYITAAVVILLIGVSGTFDRLMRLIPKGIAA 137 Query: 127 GMMAGILFQFGVQAFRSSVGAPLMVFAMLAAYLAGRRWWPRYGIVVVALTGFAVAFASGR 186 GMMAGILFQFG AF ++ P++ F+M+A Y+ GRRWWPRY IVVV L G A+A G Sbjct: 138 GMMAGILFQFGTHAFAAASAMPVLAFSMIAIYVVGRRWWPRYCIVVVLLAGIALAMPLGL 197 Query: 187 TELSALHLELAQPVFIAPHFSVGMFFSLTVPLVLVSLTGQFLPGMAVLQLAGYHPPTRAV 246 T + LE PVFIAPH+++ SL +PLV+VSLTGQFLPGMAVL+ +GY P + + Sbjct: 198 THFDGVTLEFTHPVFIAPHWALSSTLSLAIPLVVVSLTGQFLPGMAVLRGSGYDIPAKPI 257 Query: 247 VTGTALASLLTACFGGITIVLAAITAALCTGKDAHPEPGRRYIAGIANGVFYLIGGTFAA 306 +T T++AS+ A FGGITIV+AAITAALCTGKDAH +P RRY+AGIANGVFYLIGGTFA Sbjct: 258 MTATSVASISVAFFGGITIVIAAITAALCTGKDAHDDPSRRYVAGIANGVFYLIGGTFAG 317 Query: 307 SIVTLFAAFPKELIAALAGLALIGAIVSNIRLMSEDGSHAEPAVITFLATASGMTLFGLG 366 +IV LFAA PK +A LAGLALIGAI SN+ EDG H E ++ITFLATASG+TLFGLG Sbjct: 318 AIVMLFAALPKPFVAILAGLALIGAIASNVMGAIEDGEHREASIITFLATASGLTLFGLG 377 Query: 367 AAFWGVVIGMAAHWLIGRPAQK 388 +AFWG+VIG AA L+ RPAQ+ Sbjct: 378 SAFWGIVIGSAAA-LVLRPAQR 398 >ref|ZP_03698430.1| benzoate transporter [Lutiella nitroferrum 2002] gb|EEG08424.1| benzoate transporter [Lutiella nitroferrum 2002] Length = 412 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 231/383 (60%), Positives = 294/383 (76%) Query: 7 SLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQSQLVSWVWGISMGAGVSGLLLSWWFR 66 SL+A AGFLAVLISY+GPLVIF QAA +P + SWVW ISMGA VSG++LSW + Sbjct: 26 SLSAITAGFLAVLISYSGPLVIFFQAAKVANMPNEMISSWVWAISMGAAVSGIVLSWRLK 85 Query: 67 MPIITAWSAPGTALLLSLFPGVGMPEVVGAYLMAAVILIVIGVTGCFEKILAFIPKGIAA 126 +P++TAWSAPGTALL++LFPGV + + VGAYL AAV+L++IG +G F++++ IPKGIAA Sbjct: 86 VPVVTAWSAPGTALLVTLFPGVTLNQAVGAYLTAAVVLLLIGASGSFDRLMRHIPKGIAA 145 Query: 127 GMMAGILFQFGVQAFRSSVGAPLMVFAMLAAYLAGRRWWPRYGIVVVALTGFAVAFASGR 186 GMMAGILFQFG AF+S P++ F M+ AYL +R PRY IV+V L G A+A G+ Sbjct: 146 GMMAGILFQFGASAFKSVGSMPVLAFGMVGAYLLFKRLLPRYCIVLVLLCGAALAVLLGQ 205 Query: 187 TELSALHLELAQPVFIAPHFSVGMFFSLTVPLVLVSLTGQFLPGMAVLQLAGYHPPTRAV 246 T L + L LA P FI P +++G SL +PLV+VSLTGQ LPGMAVL+++GY P + + Sbjct: 206 THLGDVRLSLATPQFIRPEWTLGTTLSLALPLVMVSLTGQHLPGMAVLRVSGYDTPAKPI 265 Query: 247 VTGTALASLLTACFGGITIVLAAITAALCTGKDAHPEPGRRYIAGIANGVFYLIGGTFAA 306 +T T+LASL+ A FGGITIV+AAITAALCTGKDAH +P RRY+AGIANG FYLIGG F + Sbjct: 266 ITVTSLASLVVAFFGGITIVIAAITAALCTGKDAHDDPSRRYVAGIANGAFYLIGGMFGS 325 Query: 307 SIVTLFAAFPKELIAALAGLALIGAIVSNIRLMSEDGSHAEPAVITFLATASGMTLFGLG 366 +IV LF A PKE +A LAGLALIGAI +N++ ED H E ++ITFLATASGM+ GLG Sbjct: 326 TIVLLFTALPKEFVAVLAGLALIGAISANVQGAVEDAEHREASMITFLATASGMSFLGLG 385 Query: 367 AAFWGVVIGMAAHWLIGRPAQKK 389 +AFWGVVIG A+ ++ +P Q++ Sbjct: 386 SAFWGVVIGCIAYLVLNKPHQRQ 408 >ref|ZP_07676778.1| benzoate transport protein [Ralstonia sp. 5_7_47FAA] gb|EFP64781.1| benzoate transport protein [Ralstonia sp. 5_7_47FAA] Length = 398 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 243/382 (63%), Positives = 300/382 (78%), Gaps = 1/382 (0%) Query: 7 SLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQSQLVSWVWGISMGAGVSGLLLSWWFR 66 SL+A AGFLAVLISYAGPLVIF QAA A VP + + SWVW IS+GA VSG+ SW ++ Sbjct: 18 SLSAVAAGFLAVLISYAGPLVIFFQAAQAAHVPDAMVASWVWAISIGAAVSGIYASWRWK 77 Query: 67 MPIITAWSAPGTALLLSLFPGVGMPEVVGAYLMAAVILIVIGVTGCFEKILAFIPKGIAA 126 P++TAWSAPGTALL+SLFPG+ + E VGAY+ AAV++++IGV+G F++++ IPKGIAA Sbjct: 78 APVVTAWSAPGTALLVSLFPGLSLNEAVGAYITAAVVILLIGVSGTFDRLMRLIPKGIAA 137 Query: 127 GMMAGILFQFGVQAFRSSVGAPLMVFAMLAAYLAGRRWWPRYGIVVVALTGFAVAFASGR 186 GMMAGILFQFG AF ++ P++ F+M+A Y+ GRRWWPRY IVVV L G A+A G Sbjct: 138 GMMAGILFQFGTHAFAAASAMPVLAFSMIAIYVVGRRWWPRYCIVVVLLAGIALAITLGL 197 Query: 187 TELSALHLELAQPVFIAPHFSVGMFFSLTVPLVLVSLTGQFLPGMAVLQLAGYHPPTRAV 246 T + LE PVFIAPH+++ SL +PL +VSLTGQFLPGMAVL+ +GY P + + Sbjct: 198 THFDRVTLEFTHPVFIAPHWALSSTLSLAIPLAVVSLTGQFLPGMAVLRGSGYDIPAKPI 257 Query: 247 VTGTALASLLTACFGGITIVLAAITAALCTGKDAHPEPGRRYIAGIANGVFYLIGGTFAA 306 +T T++AS+ A FGGITIV+AAITAALCTGKDAH +P RRY+AGIANGVFYLIGGTFA Sbjct: 258 MTATSVASISVAFFGGITIVIAAITAALCTGKDAHDDPSRRYVAGIANGVFYLIGGTFAG 317 Query: 307 SIVTLFAAFPKELIAALAGLALIGAIVSNIRLMSEDGSHAEPAVITFLATASGMTLFGLG 366 +IV LFAA PK +A LAGLALIGAI SN+ EDG H E ++ITFLATASG+TLFGLG Sbjct: 318 AIVMLFAALPKPFVAILAGLALIGAIASNVMGAIEDGEHREASIITFLATASGLTLFGLG 377 Query: 367 AAFWGVVIGMAAHWLIGRPAQK 388 +AFWG+VIG AA L+ RPAQ+ Sbjct: 378 SAFWGIVIGSAAA-LVLRPAQR 398