BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1059.p (455 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774737.1| major facilitator superfamily benzoate perme... 682 0.0 ref|YP_001629999.1| benzoate transport protein, putative [Bordet... 634 e-180 ref|YP_004381949.1| major facilitator transporter [Pseudomonas m... 540 e-151 ref|YP_004474092.1| major facilitator superfamily MFS_1 [Pseudom... 537 e-150 ref|YP_001749567.1| major facilitator transporter [Pseudomonas p... 528 e-147 >ref|YP_003774737.1| major facilitator superfamily benzoate permease [Herbaspirillum seropedicae SmR1] gb|ADJ62829.1| benzoate permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 455 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 411/455 (90%), Positives = 428/455 (94%) Query: 1 MKTQEVSQIIDGARFTQFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 MKT +VSQIIDGARFT+FHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA Sbjct: 1 MKTLDVSQIIDGARFTKFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 Query: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPGEFGIFRFLAG 120 LGSYALFGMMFGAF+FGPLADRIGRKKGVAISFVLFSVSTFLSGFATSP EFG++RFLAG Sbjct: 61 LGSYALFGMMFGAFIFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPTEFGVYRFLAG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA Sbjct: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRAGKQEQARAMLAQVAPQAALGADVQLVQSDAKGSGA 240 AAVPLVLLPVILWKLPESVGFLLR G+ EQARAML QV PQA + D QLVQ+D KG+GA Sbjct: 181 AAVPLVLLPVILWKLPESVGFLLRQGRLEQARAMLTQVDPQARIATDTQLVQADVKGAGA 240 Query: 241 PMLDLFKQERTLGTLMIWVAFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 PML LFKQ+R +GTLMIWV+FFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG Sbjct: 241 PMLHLFKQDRAVGTLMIWVSFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 Query: 301 VVGAIGGGWLGDRFTLPKVVVSFFAVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 VVGAIGGGWLGDRFTLPKVVVSFF VGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL Sbjct: 301 VVGAIGGGWLGDRFTLPKVVVSFFTVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAVPGLVA 420 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFA+PGLVA Sbjct: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAIPGLVA 420 Query: 421 ALAIGIFLLRYRHGQRAVAAETAPTVTATPISRSV 455 ALA+G+F+LRYRHG +A A A SRSV Sbjct: 421 ALAMGLFMLRYRHGSQASHAAPAAKAPPAAASRSV 455 >ref|YP_001629999.1| benzoate transport protein, putative [Bordetella petrii DSM 12804] emb|CAP41729.1| benzoate transport protein, putative [Bordetella petrii] Length = 453 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 368/431 (85%), Positives = 401/431 (93%) Query: 1 MKTQEVSQIIDGARFTQFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 M T EV+QIID ARFT+FHWMVMCLC LLL+FDGYDLFIYGAVLPVLMKEW L+PVQAGA Sbjct: 1 MTTLEVNQIIDNARFTRFHWMVMCLCGLLLIFDGYDLFIYGAVLPVLMKEWGLTPVQAGA 60 Query: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPGEFGIFRFLAG 120 LGSYALFGMMFGAFVFGPLADRIGRKKGVA+SFVLFSV+T LSGFAT+P EFGI+RF+AG Sbjct: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVALSFVLFSVATLLSGFATTPNEFGIYRFIAG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 LGCGGLMPNAVALMNEYAPKR RSTLVAIMFSGYSLGGVLCAGLGI+MLP +GWQSMFFA Sbjct: 121 LGCGGLMPNAVALMNEYAPKRARSTLVAIMFSGYSLGGVLCAGLGIYMLPRYGWQSMFFA 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRAGKQEQARAMLAQVAPQAALGADVQLVQSDAKGSGA 240 AAVPLVLLPVI+WKLPESVGFLLR G+ +AR ML +VAP L A QLV +DAKG+G Sbjct: 181 AAVPLVLLPVIVWKLPESVGFLLRKGQHAKAREMLGKVAPDVPLPAGAQLVMADAKGAGV 240 Query: 241 PMLDLFKQERTLGTLMIWVAFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 PMLDLFKQ RT+GTLMIWV+FFCCLLMVYALGSWLPKLMA+AGYSLGSSLSFLL LNFGG Sbjct: 241 PMLDLFKQGRTVGTLMIWVSFFCCLLMVYALGSWLPKLMANAGYSLGSSLSFLLMLNFGG 300 Query: 301 VVGAIGGGWLGDRFTLPKVVVSFFAVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 V+GAI GGWLGDRF+LPKVVV+FFA+GTV+IALLGFNSP PVLYLLI +AGATTIGTQIL Sbjct: 301 VMGAIMGGWLGDRFSLPKVVVAFFALGTVSIALLGFNSPMPVLYLLIAIAGATTIGTQIL 360 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAVPGLVA 420 LYANTAQFYPL++RSTGLGWASG+GR+GAIVGPLLGG+LMAAAL LKMNFLVFA PGLVA Sbjct: 361 LYANTAQFYPLSMRSTGLGWASGIGRTGAIVGPLLGGSLMAAALSLKMNFLVFAAPGLVA 420 Query: 421 ALAIGIFLLRY 431 ALAIG+F+L Y Sbjct: 421 ALAIGVFILWY 431 >ref|YP_004381949.1| major facilitator transporter [Pseudomonas mendocina NK-01] gb|AEB60197.1| major facilitator transporter [Pseudomonas mendocina NK-01] Length = 446 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 323/436 (74%), Positives = 376/436 (86%), Gaps = 3/436 (0%) Query: 1 MKTQEVSQIIDGARFTQFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 M+ +V +IDGARFT+FHWMVM LCALLL+FDGYDLFIYG VLP +M++W+L+P++AGA Sbjct: 1 MRQIDVHTVIDGARFTRFHWMVMALCALLLIFDGYDLFIYGVVLPSIMQQWNLTPLEAGA 60 Query: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPGEFGIFRFLAG 120 LGSYALFGMMFGA FG LADRIGRKKG+AI FVLFS +T L+GFA+SP EFGIFRFLAG Sbjct: 61 LGSYALFGMMFGALAFGTLADRIGRKKGIAICFVLFSSATILNGFASSPTEFGIFRFLAG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 LGCGGLMPNAVALMNEYAPKRLRSTLVA+MFSGYSLGG+L AG+GI+MLP FGW+SMFFA Sbjct: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAVMFSGYSLGGMLAAGVGIYMLPRFGWESMFFA 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRAGKQEQARAMLAQVAPQAALGADVQLVQSDAKGSGA 240 AA+PL+LLP+ILWKLPESVGFL+R G+ EQARA+LA+V P+ + A QL +DAKG G Sbjct: 181 AAIPLLLLPLILWKLPESVGFLVRQGRHEQARAILAKVDPELRIDAADQLQMTDAKGHGV 240 Query: 241 PMLDLFKQERTLGTLMIWVAFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 +L+LF++ L TL +W+AFFCCLLMVYAL SWLPKLMA AGYSLGSSLSFLLALNFGG Sbjct: 241 AVLELFREGHALRTLCLWLAFFCCLLMVYALSSWLPKLMAGAGYSLGSSLSFLLALNFGG 300 Query: 301 VVGAIGGGWLGDRFTLPKVVVSFFAVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 + GAI GGWLGDRF L KV+V+FF V+I+LLGF SPTP+LY LI +AGATTIGTQIL Sbjct: 301 MAGAILGGWLGDRFNLGKVMVAFFVAAAVSISLLGFKSPTPLLYGLIFIAGATTIGTQIL 360 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAVPGLVA 420 LYA AQFY L+IRSTGLGWASG+GR+GAIVGPLLGGALMA LPL++NF+ FAVPG +A Sbjct: 361 LYAGAAQFYGLSIRSTGLGWASGIGRNGAIVGPLLGGALMAINLPLQLNFIAFAVPGAIA 420 Query: 421 ALAIGIFLLRYRHGQR 436 ALA+ +F L GQR Sbjct: 421 ALAMAVFTLS---GQR 433 >ref|YP_004474092.1| major facilitator superfamily MFS_1 [Pseudomonas fulva 12-X] gb|AEF21998.1| major facilitator superfamily MFS_1 [Pseudomonas fulva 12-X] Length = 444 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 315/436 (72%), Positives = 370/436 (84%) Query: 1 MKTQEVSQIIDGARFTQFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 M+ +V+ +ID ARF FHW+VMCLCALLL+FDGYDLFIYG VLPV+MKEW L+P+QAGA Sbjct: 1 MRNLDVNDVIDNARFNAFHWLVMCLCALLLIFDGYDLFIYGVVLPVIMKEWGLTPLQAGA 60 Query: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPGEFGIFRFLAG 120 LGSYALFGMMFGA +FG LAD+IGRKKG+AI F LFSV+T ++GFATSP EFGI RF+AG Sbjct: 61 LGSYALFGMMFGALLFGSLADKIGRKKGIAICFALFSVATIVNGFATSPTEFGICRFIAG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 LGCGGLMPNAVALMNEYAPK+LRSTLVA+MFSGYSLGG+L AG+GI+MLP FGW+SMFFA Sbjct: 121 LGCGGLMPNAVALMNEYAPKKLRSTLVAVMFSGYSLGGMLSAGVGIFMLPRFGWESMFFA 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRAGKQEQARAMLAQVAPQAALGADVQLVQSDAKGSGA 240 AA+PL+LLPVIL+ LPES+GFL+R G+ ++ARA+L ++ P AL ADVQL ++ KG G Sbjct: 181 AALPLLLLPVILYYLPESIGFLVRRGEHDKARALLGRLDPNLALDADVQLTINERKGGGV 240 Query: 241 PMLDLFKQERTLGTLMIWVAFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 +L+LF+ + TL IWVAFFCCLLMVYAL SWLPKLMA+AGYSLGSSLSFLLALNFGG Sbjct: 241 SVLELFRNGLAVRTLSIWVAFFCCLLMVYALSSWLPKLMANAGYSLGSSLSFLLALNFGG 300 Query: 301 VVGAIGGGWLGDRFTLPKVVVSFFAVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 + GAI GGWLGDRF L KV V FF V+I+LLGF SPT VLYLLI +AGATTIGTQIL Sbjct: 301 MAGAILGGWLGDRFNLTKVKVGFFIAAAVSISLLGFKSPTLVLYLLIFIAGATTIGTQIL 360 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAVPGLVA 420 LYA TAQ Y L+IRSTGLGWASG+GR+GAIVGPLLGGALM LPL++NF+ FA+PG +A Sbjct: 361 LYAGTAQLYGLSIRSTGLGWASGIGRNGAIVGPLLGGALMGIELPLQLNFMAFAIPGAIA 420 Query: 421 ALAIGIFLLRYRHGQR 436 ALA+ +F L +R Sbjct: 421 ALAMLVFALNSARSER 436 >ref|YP_001749567.1| major facilitator transporter [Pseudomonas putida W619] gb|ACA73198.1| major facilitator superfamily MFS_1 [Pseudomonas putida W619] Length = 440 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 317/440 (72%), Positives = 365/440 (82%) Query: 1 MKTQEVSQIIDGARFTQFHWMVMCLCALLLVFDGYDLFIYGAVLPVLMKEWSLSPVQAGA 60 M+T +V IID ARFT FHWMVM C LLLVFDGYDLFIYG VLPV+MKEW LSP+QAGA Sbjct: 1 MRTLDVHPIIDNARFTAFHWMVMAWCGLLLVFDGYDLFIYGVVLPVIMKEWGLSPLQAGA 60 Query: 61 LGSYALFGMMFGAFVFGPLADRIGRKKGVAISFVLFSVSTFLSGFATSPGEFGIFRFLAG 120 LGSYALFGMMFGA VFG LADRIGRKKG+AI F LFS +T L+GFA+SP EFGI+RF+AG Sbjct: 61 LGSYALFGMMFGALVFGSLADRIGRKKGIAICFALFSGATILNGFASSPSEFGIYRFIAG 120 Query: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGVLCAGLGIWMLPNFGWQSMFFA 180 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGG+L AG+GI+MLP FGW+SMFFA Sbjct: 121 LGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGMLSAGVGIFMLPRFGWESMFFA 180 Query: 181 AAVPLVLLPVILWKLPESVGFLLRAGKQEQARAMLAQVAPQAALGADVQLVQSDAKGSGA 240 AAVPL+LLPVIL+ LPES+GFL+R G+ E+AR +L ++ P + AD QL +D KG+G Sbjct: 181 AAVPLLLLPVILYYLPESIGFLVRQGRTEEARTLLKRLDPHCDVQADDQLQATDRKGNGG 240 Query: 241 PMLDLFKQERTLGTLMIWVAFFCCLLMVYALGSWLPKLMASAGYSLGSSLSFLLALNFGG 300 +LDLF+ TL +W+AFFCCLLMVYAL SWLPKLMA+AGYSLGSSLSFLLALNFGG Sbjct: 241 SVLDLFRNGLATRTLALWLAFFCCLLMVYALSSWLPKLMANAGYSLGSSLSFLLALNFGG 300 Query: 301 VVGAIGGGWLGDRFTLPKVVVSFFAVGTVAIALLGFNSPTPVLYLLIIVAGATTIGTQIL 360 + GAI GGWLGDR+ L KV V+FF V+I+LLG NSP PVLY+LI +AGATTIGTQIL Sbjct: 301 MAGAILGGWLGDRYNLVKVKVAFFLAAAVSISLLGVNSPMPVLYVLIFIAGATTIGTQIL 360 Query: 361 LYANTAQFYPLAIRSTGLGWASGVGRSGAIVGPLLGGALMAAALPLKMNFLVFAVPGLVA 420 LYA AQ Y LA+RSTGLGWASG+GR+GAIVGPLLGGALM LPL++NF+ FA+PG +A Sbjct: 361 LYAGAAQLYGLAVRSTGLGWASGIGRNGAIVGPLLGGALMGINLPLQLNFIAFAIPGAIA 420 Query: 421 ALAIGIFLLRYRHGQRAVAA 440 ALA+ + L R A A Sbjct: 421 ALAMAVHLASSRRHALAATA 440