BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1057.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774735.1| cis-diol dehydrogenase [Herbaspirillum serop... 377 e-102 ref|YP_001583217.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxyla... 356 2e-96 ref|ZP_03573662.1| cis-diol dehydrogenase [Burkholderia multivor... 355 4e-96 ref|ZP_03583401.1| cis-diol dehydrogenase [Burkholderia multivor... 352 4e-95 ref|YP_001115013.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxyla... 351 7e-95 >ref|YP_003774735.1| cis-diol dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62827.1| cis-diol dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 208/256 (81%), Positives = 231/256 (90%) Query: 7 RARFAGKVAVVTGAAQGILRGVALGIAAEGGQVLMVDRAGFIHEVAMEAPEGRATGFVAD 66 ++RFAGKV VVTGAAQGILRGVALGIA EGGQVL+VDRA F+H+VA EA GR G VAD Sbjct: 2 KSRFAGKVVVVTGAAQGILRGVALGIAEEGGQVLLVDRAEFVHDVAAEAAGGRGKGLVAD 61 Query: 67 LETHDGAQAAMARAIELHGRIDLLVNGVGGAIRMRPFAEFEADQIDAEIRRSLMPTLYGC 126 LE++ GAQAAM A++ +GRID+L+NGVGGAIRMRP+A++ QIDAEIRRSLMPTLYGC Sbjct: 62 LESYAGAQAAMDEAVQRYGRIDILINGVGGAIRMRPYAQYTPTQIDAEIRRSLMPTLYGC 121 Query: 127 HAVLPHMLRAGRGTIVNVSSNATRGIRRVPYSAAKGGVNAMTMALAMEYGEQGIRVVATA 186 HAVLP +L+ GRG IVNVSSNATRGIRRVPYSAAKGGVNA+T ALAMEYGE GIRVVATA Sbjct: 122 HAVLPQLLQQGRGVIVNVSSNATRGIRRVPYSAAKGGVNALTAALAMEYGELGIRVVATA 181 Query: 187 PGGTKAPPRRVPRNVEGDSAQEQAWMQEAVQQVTGSTFFKRYATLEEQIAPILFMASDEA 246 PGGT+APPRRVPRN EGDS QEQ WMQEAVQQVTGS +FKRY+TLEEQIAPILF+ASD+A Sbjct: 182 PGGTQAPPRRVPRNPEGDSQQEQMWMQEAVQQVTGSNYFKRYSTLEEQIAPILFLASDDA 241 Query: 247 SYITGAVLPVAGGDNG 262 SYITGAVLPVAGGDNG Sbjct: 242 SYITGAVLPVAGGDNG 257 >ref|YP_001583217.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [Burkholderia multivorans ATCC 17616] ref|YP_001949658.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [Burkholderia multivorans ATCC 17616] gb|ABX16925.1| short-chain dehydrogenase/reductase SDR [Burkholderia multivorans ATCC 17616] dbj|BAG47122.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 258 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 206/254 (81%), Positives = 219/254 (86%) Query: 9 RFAGKVAVVTGAAQGILRGVALGIAAEGGQVLMVDRAGFIHEVAMEAPEGRATGFVADLE 68 RFAGK VVTGAAQGI RGVAL AAEGGQVL VDRA F+ +VA EA RA GFVADLE Sbjct: 5 RFAGKTLVVTGAAQGIGRGVALRAAAEGGQVLFVDRAEFVADVAAEAGTDRAAGFVADLE 64 Query: 69 THDGAQAAMARAIELHGRIDLLVNGVGGAIRMRPFAEFEADQIDAEIRRSLMPTLYGCHA 128 T++GA+A MA A G ID+L+NGVGGAIRMRPFAEFE QIDAEIRRSLMPTLY CHA Sbjct: 65 TYEGARATMAFAASRFGAIDVLINGVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLYACHA 124 Query: 129 VLPHMLRAGRGTIVNVSSNATRGIRRVPYSAAKGGVNAMTMALAMEYGEQGIRVVATAPG 188 VLP++L GRGTIVNVSSNATRGIRRVPYSAAKGGVNA+T ALAMEYGE IRVVATAPG Sbjct: 125 VLPYLLERGRGTIVNVSSNATRGIRRVPYSAAKGGVNALTQALAMEYGEHNIRVVATAPG 184 Query: 189 GTKAPPRRVPRNVEGDSAQEQAWMQEAVQQVTGSTFFKRYATLEEQIAPILFMASDEASY 248 GT APPRRVPRN GDSAQEQAWM EAV+QVT STFFKRY TL+EQIAPILF+ASDEASY Sbjct: 185 GTTAPPRRVPRNAAGDSAQEQAWMSEAVKQVTESTFFKRYGTLDEQIAPILFLASDEASY 244 Query: 249 ITGAVLPVAGGDNG 262 ITG VLPVAGGDNG Sbjct: 245 ITGTVLPVAGGDNG 258 >ref|ZP_03573662.1| cis-diol dehydrogenase [Burkholderia multivorans CGD2M] ref|ZP_03581451.1| cis-diol dehydrogenase [Burkholderia multivorans CGD2] gb|EEE04082.1| cis-diol dehydrogenase [Burkholderia multivorans CGD2] gb|EEE11599.1| cis-diol dehydrogenase [Burkholderia multivorans CGD2M] Length = 256 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 205/254 (80%), Positives = 218/254 (85%) Query: 9 RFAGKVAVVTGAAQGILRGVALGIAAEGGQVLMVDRAGFIHEVAMEAPEGRATGFVADLE 68 RFAGK VVTGAAQGI RGVAL AAEGGQVL VDRA F+ +VA EA RA GFVADLE Sbjct: 3 RFAGKTLVVTGAAQGIGRGVALRAAAEGGQVLFVDRAEFVADVAAEAGTDRAAGFVADLE 62 Query: 69 THDGAQAAMARAIELHGRIDLLVNGVGGAIRMRPFAEFEADQIDAEIRRSLMPTLYGCHA 128 T++GA+A MA A G ID+L+NGVGGAIRMRPFAEFE QIDAEIRRSLMPTLY CHA Sbjct: 63 TYEGARATMAFAASRFGAIDVLINGVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLYACHA 122 Query: 129 VLPHMLRAGRGTIVNVSSNATRGIRRVPYSAAKGGVNAMTMALAMEYGEQGIRVVATAPG 188 VLP++L GRGTIVNVSSNATRGIRRVPYSAAKGGVNA+T ALAMEYGE IRVVATAPG Sbjct: 123 VLPYLLERGRGTIVNVSSNATRGIRRVPYSAAKGGVNALTQALAMEYGEHNIRVVATAPG 182 Query: 189 GTKAPPRRVPRNVEGDSAQEQAWMQEAVQQVTGSTFFKRYATLEEQIAPILFMASDEASY 248 GT APPRRVPRN GDS QEQAWM EAV+QVT STFFKRY TL+EQIAPILF+ASDEASY Sbjct: 183 GTTAPPRRVPRNAAGDSEQEQAWMSEAVKQVTESTFFKRYGTLDEQIAPILFLASDEASY 242 Query: 249 ITGAVLPVAGGDNG 262 ITG VLPVAGGDNG Sbjct: 243 ITGTVLPVAGGDNG 256 >ref|ZP_03583401.1| cis-diol dehydrogenase [Burkholderia multivorans CGD1] gb|EEE01844.1| cis-diol dehydrogenase [Burkholderia multivorans CGD1] Length = 256 Score = 352 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 207/254 (81%), Positives = 219/254 (86%) Query: 9 RFAGKVAVVTGAAQGILRGVALGIAAEGGQVLMVDRAGFIHEVAMEAPEGRATGFVADLE 68 RFAGK VVTGAAQGI RGVAL AAEGGQVL VDRA F+ +VA EA RA GFVADLE Sbjct: 3 RFAGKTLVVTGAAQGIGRGVALRAAAEGGQVLFVDRAEFVADVAAEAGTDRAAGFVADLE 62 Query: 69 THDGAQAAMARAIELHGRIDLLVNGVGGAIRMRPFAEFEADQIDAEIRRSLMPTLYGCHA 128 T++GA+AAMA A G ID+L+NGVGGAIRMRPFAEFE QIDAEIRRSLMPTLY CHA Sbjct: 63 TYEGARAAMAFAASRFGAIDVLINGVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLYACHA 122 Query: 129 VLPHMLRAGRGTIVNVSSNATRGIRRVPYSAAKGGVNAMTMALAMEYGEQGIRVVATAPG 188 VLPH+L GRGTIVNVSSNATRGIRRVPYSAAKGGVNA+T ALAMEYGE IRVVATAPG Sbjct: 123 VLPHLLERGRGTIVNVSSNATRGIRRVPYSAAKGGVNALTQALAMEYGEHNIRVVATAPG 182 Query: 189 GTKAPPRRVPRNVEGDSAQEQAWMQEAVQQVTGSTFFKRYATLEEQIAPILFMASDEASY 248 GT APPRRVPRN GDS QEQAWM EAV+QVT STFFKRY TL+EQIAPILF+ASDEASY Sbjct: 183 GTTAPPRRVPRNAAGDSEQEQAWMSEAVKQVTESTFFKRYGTLDEQIAPILFLASDEASY 242 Query: 249 ITGAVLPVAGGDNG 262 ITG VLPVAGGDNG Sbjct: 243 ITGTVLPVAGGDNG 256 >ref|YP_001115013.1| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [Burkholderia vietnamiensis G4] gb|ABO58758.1| short-chain dehydrogenase/reductase SDR [Burkholderia vietnamiensis G4] Length = 258 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 209/254 (82%), Positives = 222/254 (87%) Query: 9 RFAGKVAVVTGAAQGILRGVALGIAAEGGQVLMVDRAGFIHEVAMEAPEGRATGFVADLE 68 RF+GKV VVTGAAQGI RGVAL AAEGG VL+VDRA F+ EVA EAPEG A VADLE Sbjct: 5 RFSGKVVVVTGAAQGIGRGVALRAAAEGGSVLLVDRAEFVAEVAAEAPEGSAAACVADLE 64 Query: 69 THDGAQAAMARAIELHGRIDLLVNGVGGAIRMRPFAEFEADQIDAEIRRSLMPTLYGCHA 128 T+DGA+AA+A AI GRID+L+NGVGGAIRMRPFAEFE QIDAEIRRSLMPTLY CHA Sbjct: 65 TYDGARAAIACAIAAFGRIDVLINGVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLYSCHA 124 Query: 129 VLPHMLRAGRGTIVNVSSNATRGIRRVPYSAAKGGVNAMTMALAMEYGEQGIRVVATAPG 188 VLPHM+ AG GTIVNVSSNATRGIRRVPYSAAKGGVNA+T ALAMEY E GIRVVATAPG Sbjct: 125 VLPHMVEAGGGTIVNVSSNATRGIRRVPYSAAKGGVNALTAALAMEYAEHGIRVVATAPG 184 Query: 189 GTKAPPRRVPRNVEGDSAQEQAWMQEAVQQVTGSTFFKRYATLEEQIAPILFMASDEASY 248 GT APPRRVPRN GDSAQEQAWM EAV+QVT STFFKRY TL+EQIAPILF+ASDEASY Sbjct: 185 GTTAPPRRVPRNAAGDSAQEQAWMAEAVRQVTDSTFFKRYGTLDEQIAPILFLASDEASY 244 Query: 249 ITGAVLPVAGGDNG 262 ITG VLPVAGGD G Sbjct: 245 ITGTVLPVAGGDTG 258