BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1056.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774734.1| electron transfer component of chlorobenzoat... 566 e-159 ref|YP_001630002.1| ferredoxin--NAD(+) reductase [Bordetella pet... 528 e-148 ref|ZP_03573661.1| electron transfer component of chlorobenzoate... 485 e-135 ref|YP_001583216.1| oxidoreductase FAD/NAD(P)-binding subunit [B... 484 e-135 ref|ZP_03583402.1| electron transfer component of chlorobenzoate... 483 e-134 >ref|YP_003774734.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Herbaspirillum seropedicae SmR1] gb|ADJ62826.1| electron transfer component of chlorobenzoate 1,2-dioxygenase protein [Herbaspirillum seropedicae SmR1] Length = 351 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 280/331 (84%), Positives = 297/331 (89%) Query: 1 MSSYRIALNFEDGVTRIIQCGPKEKVLDAAFRQRINLPMDCSDGVCGTCKCRAESGQYDL 60 MSSYRIALNFEDGVTRII CG KEKVLDAAFR RINLPMDCSDGVCGTCKCRAESG YDL Sbjct: 1 MSSYRIALNFEDGVTRIIDCGAKEKVLDAAFRNRINLPMDCSDGVCGTCKCRAESGLYDL 60 Query: 61 GDDYIDDALSSDEAEQGLVLTCQMIPQSDCVVAVPVASTACKTGSAKFGGKVAEVTAFGE 120 GDDYIDDALSSDEA G+VLTCQM+PQSDCV+AVPVASTACKTG+A F GKVA ++ G Sbjct: 61 GDDYIDDALSSDEAGAGMVLTCQMVPQSDCVIAVPVASTACKTGTASFTGKVAGLSDLGG 120 Query: 121 AAFELVLEVAADAPAFLPGQYVNIAVPGSGQHRSYSFSSPSGATRMSFLIKNVPGGLMSG 180 AAFELVLE A+APAFLPGQYVNI VPGSGQHRSYSFSSPSGA+RMSFLIKNVPGGLMS Sbjct: 121 AAFELVLEAPANAPAFLPGQYVNIGVPGSGQHRSYSFSSPSGASRMSFLIKNVPGGLMSN 180 Query: 181 WLGKAATGDALEMTGPLGSFYLRPVNKPVLMLAGGTGLAPFLAMLEEMAQQGVQHPVHLI 240 WL A+ G LE+TGPLGSFYLRPV +PVLMLAGGTGLAPFL+MLEE+AQQG+ PVHLI Sbjct: 181 WLAGASEGATLELTGPLGSFYLRPVKRPVLMLAGGTGLAPFLSMLEELAQQGLDQPVHLI 240 Query: 241 YGVTRDQDLVLVERLDDLAQRLSGFSFTTCVADAATTHPRQGYVTQHMPAEVLHDGAVDV 300 YGVTRDQDLVLVERL LA RL GFSFTTCVAD ATTH RQGYVTQHMPA VLHDG VDV Sbjct: 241 YGVTRDQDLVLVERLQALADRLPGFSFTTCVADPATTHARQGYVTQHMPAAVLHDGNVDV 300 Query: 301 YLCGPPPMVEAVQKHFQSQGIAPASFHYEKF 331 YLCGPPPMVEAVQKHFQ+ G+ PASF+YEKF Sbjct: 301 YLCGPPPMVEAVQKHFQATGMQPASFYYEKF 331 >ref|YP_001630002.1| ferredoxin--NAD(+) reductase [Bordetella petrii DSM 12804] emb|CAP41732.1| Ferredoxin--NAD(+) reductase [Bordetella petrii] Length = 341 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 258/341 (75%), Positives = 290/341 (85%), Gaps = 3/341 (0%) Query: 1 MSSYRIALNFEDGVTRIIQCGPKEKVLDAAFRQRINLPMDCSDGVCGTCKCRAESGQYDL 60 MSS+RIALNFEDGVTR + CG EKVLDAAFR RINLPMDCSDGVCGTCKCRAESG YDL Sbjct: 1 MSSFRIALNFEDGVTRFVDCGVTEKVLDAAFRHRINLPMDCSDGVCGTCKCRAESGTYDL 60 Query: 61 GDDYIDDALSSDEAEQGLVLTCQMIPQSDCVVAVPVASTACKTGSAKFGGKVAEVTAFGE 120 GDDYI+DAL+ DEA +GLVLTCQM+P+SDCV+AVPV ST CKTG+A+F G VA +T F + Sbjct: 61 GDDYIEDALTEDEAAEGLVLTCQMVPKSDCVIAVPVPSTTCKTGTAQFSGTVAAITPFSD 120 Query: 121 AAFELVLEVAADAPAFLPGQYVNIAVPGSGQHRSYSFSSPSGATRMSFLIKNVPGGLMSG 180 AA+EL L+V+ DAPAFLPGQYVNI VPGSGQHRSYSFSS GA RM+FLIK+VPGGLMSG Sbjct: 121 AAYELALDVSEDAPAFLPGQYVNINVPGSGQHRSYSFSSAPGARRMTFLIKHVPGGLMSG 180 Query: 181 WL---GKAATGDALEMTGPLGSFYLRPVNKPVLMLAGGTGLAPFLAMLEEMAQQGVQHPV 237 WL A+G ALEMTGPLGSFYLR V +P+L LAGGTGLAPFLAMLE +A Q PV Sbjct: 181 WLAGAASGASGGALEMTGPLGSFYLRAVTRPLLFLAGGTGLAPFLAMLEVLANQSATQPV 240 Query: 238 HLIYGVTRDQDLVLVERLDDLAQRLSGFSFTTCVADAATTHPRQGYVTQHMPAEVLHDGA 297 H+IYG TRDQDLVLVERL + AQR+ GF+FTTCVAD AT+H RQGYVT HMPA+ LH G Sbjct: 241 HMIYGATRDQDLVLVERLQEYAQRIPGFTFTTCVADPATSHERQGYVTNHMPAQALHGGN 300 Query: 298 VDVYLCGPPPMVEAVQKHFQSQGIAPASFHYEKFVTSQPVA 338 VDVYLCGPPPMVEAVQKHF+++GI PA+FHYEKF +QP A Sbjct: 301 VDVYLCGPPPMVEAVQKHFKAEGITPANFHYEKFTPNQPAA 341 >ref|ZP_03573661.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD2M] ref|ZP_03581450.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD2] gb|EEE04081.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD2] gb|EEE11598.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD2M] Length = 342 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 230/333 (69%), Positives = 273/333 (81%), Gaps = 2/333 (0%) Query: 1 MSSYRIALNFEDGVTRIIQCGPKEKVLDAAFRQRINLPMDCSDGVCGTCKCRAESGQYDL 60 MSSY+IALNFEDGVTR I+C EKVLDAAFR RINLPMDCSDGVCGTCKCRAESG+YDL Sbjct: 1 MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDL 60 Query: 61 GDDYIDDALSSDEAEQGLVLTCQMIPQSDCVVAVPVASTACKTGSAKFGGKVAEVTAFGE 120 GDDYIDDAL+ DE ++GLVLTCQM+PQSDCV+AVP +STACKTG+++F VA++ + Sbjct: 61 GDDYIDDALTEDEKDEGLVLTCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHND 120 Query: 121 AA--FELVLEVAADAPAFLPGQYVNIAVPGSGQHRSYSFSSPSGATRMSFLIKNVPGGLM 178 AA EL ++ AADAP FLPGQYVNI VPGSGQHRSYSFSS G T++SFLIK +PGG+M Sbjct: 121 AAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFSSAPGETKVSFLIKKIPGGVM 180 Query: 179 SGWLGKAATGDALEMTGPLGSFYLRPVNKPVLMLAGGTGLAPFLAMLEEMAQQGVQHPVH 238 S WL A GD L++ GPLGSFYLR V +P+L LAGGTGLAPFL+MLE +A+ G Q +H Sbjct: 181 STWLEAARPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH 240 Query: 239 LIYGVTRDQDLVLVERLDDLAQRLSGFSFTTCVADAATTHPRQGYVTQHMPAEVLHDGAV 298 L+YGVTRD DLV V+ +D RL FS+ T VAD A++HPR+G+VTQH+PA+ L+DG V Sbjct: 241 LVYGVTRDLDLVQVDAIDAYVARLPNFSYATVVADDASSHPRKGWVTQHIPADALNDGDV 300 Query: 299 DVYLCGPPPMVEAVQKHFQSQGIAPASFHYEKF 331 DVYLCGPPPMV+AV+KHF G+ P SFHYEKF Sbjct: 301 DVYLCGPPPMVDAVRKHFDDTGVKPNSFHYEKF 333 >ref|YP_001583216.1| oxidoreductase FAD/NAD(P)-binding subunit [Burkholderia multivorans ATCC 17616] ref|YP_001949659.1| benzoate 1,2-dioxygenase electron transfer component [Burkholderia multivorans ATCC 17616] gb|ABX16924.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia multivorans ATCC 17616] dbj|BAG47123.1| benzoate 1,2-dioxygenase electron transfer component [Burkholderia multivorans ATCC 17616] Length = 342 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 229/333 (68%), Positives = 273/333 (81%), Gaps = 2/333 (0%) Query: 1 MSSYRIALNFEDGVTRIIQCGPKEKVLDAAFRQRINLPMDCSDGVCGTCKCRAESGQYDL 60 MSSY+IALNFEDGVTR I+C EKVLDAAFR RINLPMDCSDGVCGTCKCRAESG+YDL Sbjct: 1 MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDL 60 Query: 61 GDDYIDDALSSDEAEQGLVLTCQMIPQSDCVVAVPVASTACKTGSAKFGGKVAEVTAFGE 120 GDDYIDDAL+ DE ++GLVLTCQM+PQSDCV+AVP +STACKTG+++F VA++ + Sbjct: 61 GDDYIDDALTEDEKDEGLVLTCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHND 120 Query: 121 AA--FELVLEVAADAPAFLPGQYVNIAVPGSGQHRSYSFSSPSGATRMSFLIKNVPGGLM 178 AA EL ++ AADAP FLPGQYVNI VPGSGQHRSYSFSS G T++SFLIK +PGG+M Sbjct: 121 AAIVLELDIDAAADAPVFLPGQYVNIDVPGSGQHRSYSFSSAPGETKVSFLIKKIPGGVM 180 Query: 179 SGWLGKAATGDALEMTGPLGSFYLRPVNKPVLMLAGGTGLAPFLAMLEEMAQQGVQHPVH 238 S WL A GD L++ GPLGSFYLR V +P+L LAGGTGLAPFL+MLE +A+ G Q +H Sbjct: 181 SSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH 240 Query: 239 LIYGVTRDQDLVLVERLDDLAQRLSGFSFTTCVADAATTHPRQGYVTQHMPAEVLHDGAV 298 L+YGVTRD DLV V+ +D +L FS+ T VAD A++HPR+G+VTQH+PA+ L+DG V Sbjct: 241 LVYGVTRDLDLVQVDAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDV 300 Query: 299 DVYLCGPPPMVEAVQKHFQSQGIAPASFHYEKF 331 DVYLCGPPPMV+AV+KHF G+ P SFHYEKF Sbjct: 301 DVYLCGPPPMVDAVRKHFDDTGVKPNSFHYEKF 333 >ref|ZP_03583402.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD1] gb|EEE01845.1| electron transfer component of chlorobenzoate 1,2-dioxygenase [Burkholderia multivorans CGD1] Length = 342 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 229/333 (68%), Positives = 272/333 (81%), Gaps = 2/333 (0%) Query: 1 MSSYRIALNFEDGVTRIIQCGPKEKVLDAAFRQRINLPMDCSDGVCGTCKCRAESGQYDL 60 MSSY+IALNFEDGVTR I+C EKVLDAAFR RINLPMDCSDGVCGTCKCRAESG+YDL Sbjct: 1 MSSYKIALNFEDGVTRFIECKAGEKVLDAAFRARINLPMDCSDGVCGTCKCRAESGRYDL 60 Query: 61 GDDYIDDALSSDEAEQGLVLTCQMIPQSDCVVAVPVASTACKTGSAKFGGKVAEVTAFGE 120 GDDYIDDAL+ DE ++GLVLTCQM+PQSDCV+AVP +STACKTG+++F VA++ + Sbjct: 61 GDDYIDDALTEDEKDEGLVLTCQMVPQSDCVIAVPTSSTACKTGNSRFAATVAKIEPHND 120 Query: 121 AA--FELVLEVAADAPAFLPGQYVNIAVPGSGQHRSYSFSSPSGATRMSFLIKNVPGGLM 178 AA EL ++ AADAP FLPGQYVNI VPGSGQHRSYSFSS G T++SFLIK +PGG+M Sbjct: 121 AAIVLELDIDTAADAPVFLPGQYVNIDVPGSGQHRSYSFSSAPGETKVSFLIKKIPGGVM 180 Query: 179 SGWLGKAATGDALEMTGPLGSFYLRPVNKPVLMLAGGTGLAPFLAMLEEMAQQGVQHPVH 238 S WL A GD L++ GPLGSFYLR V +P+L LAGGTGLAPFL+MLE +A+ G Q +H Sbjct: 181 SSWLEAAQPGDKLDLHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARAGSQQKIH 240 Query: 239 LIYGVTRDQDLVLVERLDDLAQRLSGFSFTTCVADAATTHPRQGYVTQHMPAEVLHDGAV 298 L+YGVTRD DLV V +D +L FS+ T VAD A++HPR+G+VTQH+PA+ L+DG V Sbjct: 241 LVYGVTRDLDLVQVGAIDAYVAKLPNFSYATVVADEASSHPRKGWVTQHIPADALNDGDV 300 Query: 299 DVYLCGPPPMVEAVQKHFQSQGIAPASFHYEKF 331 DVYLCGPPPMV+AV+KHF G+ P SFHYEKF Sbjct: 301 DVYLCGPPPMVDAVRKHFDDTGVKPNSFHYEKF 333