BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1055.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774733.1| chlorobenzoate 1,2-dioxygenase subunit beta ... 290 4e-77 ref|YP_001630003.1| benzoate 1,2-dioxygenase [Bordetella petrii ... 257 3e-67 ref|YP_914979.1| 2-chlorobenzoate 1,2-dioxygenase [Paracoccus de... 243 6e-63 ref|ZP_03503868.1| 2-chlorobenzoate 1,2-dioxygenase [Rhizobium e... 239 1e-61 ref|YP_002981389.1| benzoate 1,2-dioxygenase small subunit [Rals... 239 1e-61 >ref|YP_003774733.1| chlorobenzoate 1,2-dioxygenase subunit beta [Herbaspirillum seropedicae SmR1] gb|ADJ62825.1| beta subunit of aromatic ring hydroxylase component of chlorobenzoate 1,2-dioxygenase protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 146/164 (89%), Positives = 152/164 (92%) Query: 1 MSQPAQLDAVCAFLYREARYLDERQWESWLELYAPDVEYWMPAWDDDDQLTEDPQREISL 60 MSQ L+A+CAFLYREARYLDERQWE WLELYAPDVEYWMPAWDDDDQ+TEDPQREISL Sbjct: 1 MSQSTSLNAICAFLYREARYLDERQWEQWLELYAPDVEYWMPAWDDDDQITEDPQREISL 60 Query: 61 IYYANRDGLEDRVFRIKTERSSASMPEPRTSHMIANVEILDEHDDVVEVRYNFHTLSHRY 120 +YYANRDGLEDRVFRIKTERSSASMPEPRTSHMIANVE+LDE DVVEVRYNFHTLSHRY Sbjct: 61 MYYANRDGLEDRVFRIKTERSSASMPEPRTSHMIANVEVLDEQGDVVEVRYNFHTLSHRY 120 Query: 121 KITDQFFGTTLVSLRKTEGGFQIASKKIALKNDYIRQVIDVYHV 164 KITDQFFGT L +LRK EGGF IA KKI LKNDYIRQVIDVYHV Sbjct: 121 KITDQFFGTVLATLRKVEGGFVIARKKIVLKNDYIRQVIDVYHV 164 >ref|YP_001630003.1| benzoate 1,2-dioxygenase [Bordetella petrii DSM 12804] emb|CAP41733.1| benzoate 1,2-dioxygenase [Bordetella petrii] Length = 166 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 128/166 (77%), Positives = 144/166 (86%), Gaps = 2/166 (1%) Query: 1 MSQPAQLD--AVCAFLYREARYLDERQWESWLELYAPDVEYWMPAWDDDDQLTEDPQREI 58 MS +Q D +CAFLYREAR+LDER+WE WL+LYAPD EYWMPAWDDDDQLT DPQ +I Sbjct: 1 MSTGSQADYGMICAFLYREARHLDEREWEPWLDLYAPDAEYWMPAWDDDDQLTVDPQSQI 60 Query: 59 SLIYYANRDGLEDRVFRIKTERSSASMPEPRTSHMIANVEILDEHDDVVEVRYNFHTLSH 118 SLIYY NR+GLEDRVFRIKTERSSASMPEPRT+HM+ NVE+LDE DD V+VRYNFHTLSH Sbjct: 61 SLIYYPNRNGLEDRVFRIKTERSSASMPEPRTNHMLTNVEVLDERDDAVDVRYNFHTLSH 120 Query: 119 RYKITDQFFGTTLVSLRKTEGGFQIASKKIALKNDYIRQVIDVYHV 164 RYK+TD FFGT V+LRK + GF IA KKI LKNDYIRQVID+YH+ Sbjct: 121 RYKLTDHFFGTIYVTLRKVKRGFLIARKKIVLKNDYIRQVIDIYHI 166 >ref|YP_914979.1| 2-chlorobenzoate 1,2-dioxygenase [Paracoccus denitrificans PD1222] gb|ABL69283.1| 2-chlorobenzoate 1,2-dioxygenase [Paracoccus denitrificans PD1222] Length = 162 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 118/157 (75%), Positives = 135/157 (85%) Query: 8 DAVCAFLYREARYLDERQWESWLELYAPDVEYWMPAWDDDDQLTEDPQREISLIYYANRD 67 DA+CAFLYREAR LD+RQW+ WL YAPDV YWMPAWDD+DQ+TEDPQ +ISLIYY +RD Sbjct: 6 DAICAFLYREARLLDDRQWDEWLTCYAPDVTYWMPAWDDNDQITEDPQSQISLIYYPSRD 65 Query: 68 GLEDRVFRIKTERSSASMPEPRTSHMIANVEILDEHDDVVEVRYNFHTLSHRYKITDQFF 127 GLEDRVFRIKTERS AS PEPRTSH +ANVE++ + V+VRYNFHTL+HRYK+TDQFF Sbjct: 66 GLEDRVFRIKTERSGASTPEPRTSHTVANVEVVADRGAEVDVRYNFHTLNHRYKVTDQFF 125 Query: 128 GTTLVSLRKTEGGFQIASKKIALKNDYIRQVIDVYHV 164 GTT +LR+T G IA+KKI LKNDYIRQVIDVYHV Sbjct: 126 GTTFATLRRTADGLLIANKKIVLKNDYIRQVIDVYHV 162 >ref|ZP_03503868.1| 2-chlorobenzoate 1,2-dioxygenase [Rhizobium etli Kim 5] ref|ZP_03520704.1| 2-chlorobenzoate 1,2-dioxygenase [Rhizobium etli GR56] Length = 162 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 116/157 (73%), Positives = 131/157 (83%) Query: 8 DAVCAFLYREARYLDERQWESWLELYAPDVEYWMPAWDDDDQLTEDPQREISLIYYANRD 67 DA+CAFLYREAR LD+R+W+ WL YAPDV YWMPAWDDDD++TEDPQ +ISLIYY NRD Sbjct: 6 DAICAFLYREARLLDDREWDEWLTCYAPDVTYWMPAWDDDDRITEDPQSQISLIYYPNRD 65 Query: 68 GLEDRVFRIKTERSSASMPEPRTSHMIANVEILDEHDDVVEVRYNFHTLSHRYKITDQFF 127 GLEDRVFRIKTERS AS PEPRTSH + NVE+L + V+VRYNFHTL+HRYK+TDQFF Sbjct: 66 GLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLADRSGEVDVRYNFHTLNHRYKVTDQFF 125 Query: 128 GTTLVSLRKTEGGFQIASKKIALKNDYIRQVIDVYHV 164 GT V+LRK IA KKI LKNDYIRQVIDVYH+ Sbjct: 126 GTMFVTLRKHGDNLLIAKKKIVLKNDYIRQVIDVYHI 162 >ref|YP_002981389.1| benzoate 1,2-dioxygenase small subunit [Ralstonia pickettii 12D] gb|ACS62717.1| benzoate 1,2-dioxygenase, small subunit [Ralstonia pickettii 12D] Length = 162 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 119/160 (74%), Positives = 131/160 (81%) Query: 5 AQLDAVCAFLYREARYLDERQWESWLELYAPDVEYWMPAWDDDDQLTEDPQREISLIYYA 64 A +CA LYREAR LD+RQW++WLE YA DV YWMPAWDDDDQLTEDP +ISL+YYA Sbjct: 3 ADYQNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTEDPHSQISLMYYA 62 Query: 65 NRDGLEDRVFRIKTERSSASMPEPRTSHMIANVEILDEHDDVVEVRYNFHTLSHRYKITD 124 NR GLEDRVFRIKTERS AS PEPRTSH + NVE+L E D V+VRYNFHTLSHRYK TD Sbjct: 63 NRCGLEDRVFRIKTERSGASTPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKTTD 122 Query: 125 QFFGTTLVSLRKTEGGFQIASKKIALKNDYIRQVIDVYHV 164 FFGT V+LR+ GF IASKKI LKNDYIRQV+DVYHV Sbjct: 123 HFFGTMFVTLRRAGDGFLIASKKIVLKNDYIRQVLDVYHV 162