BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1052.p (417 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774730.1| muconate cycloisomerase [Herbaspirillum sero... 689 0.0 ref|YP_001630006.1| chloromuconate cycloisomerase [Bordetella pe... 638 0.0 ref|YP_004127270.1| muconate and chloromuconate cycloisomerase [... 561 e-158 ref|ZP_03583407.1| muconate cycloisomerase [Burkholderia multivo... 498 e-139 ref|YP_001583211.1| muconate and chloromuconate cycloisomerase [... 496 e-138 >ref|YP_003774730.1| muconate cycloisomerase [Herbaspirillum seropedicae SmR1] gb|ADJ62822.1| muconate cycloisomerase protein [Herbaspirillum seropedicae SmR1] Length = 398 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 375/398 (94%), Positives = 385/398 (96%), Gaps = 1/398 (0%) Query: 21 MDTPQH-LHAAAPALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGTVGVGE 79 M+T H + AA PALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDG++GVGE Sbjct: 1 METTLHNITAAGPALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGSIGVGE 60 Query: 80 GTTIGGLAYGAESPEGMKLAIDTYFAPLLLGADASLIPAIMARLNKAIQDNRFAKCAIET 139 GTTIGGLAYGAESPEGMKLAIDTYFAPLLLGADAS IPAIMARLNKAI DNRFAKCAIET Sbjct: 61 GTTIGGLAYGAESPEGMKLAIDTYFAPLLLGADASQIPAIMARLNKAICDNRFAKCAIET 120 Query: 140 ALFDALGQRTGLPVSQLLGGRARESLPIAWTLASGDTAKDIDEAERMLAARRHKIFKLKI 199 ALFDALGQRTGLPVSQLLGGR+RESLPIAWTLASGDTAKDIDEAERMLA RRH IFKLKI Sbjct: 121 ALFDALGQRTGLPVSQLLGGRSRESLPIAWTLASGDTAKDIDEAERMLAQRRHNIFKLKI 180 Query: 200 GRREVEADVAHVAAIKKALGDRGSVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVASA 259 GRREV+ADVAHVAAIKKALGDRG+VRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVAS Sbjct: 181 GRREVDADVAHVAAIKKALGDRGAVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVASP 240 Query: 260 PALARLKGKHAIAIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGDA 319 ALARLKG+HAIAIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGDA Sbjct: 241 QALARLKGRHAIAIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGDA 300 Query: 320 AGIELYGGTMLEGAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLAI 379 AGIELYGGTMLEGAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLAI Sbjct: 301 AGIELYGGTMLEGAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLAI 360 Query: 380 PNRPGLGIVLDEERVQYFRRDRKQGATVTAVRPATLAG 417 P+RPGLGI LDEER+QYFRRDRKQGATVTAVRPA LAG Sbjct: 361 PHRPGLGITLDEERLQYFRRDRKQGATVTAVRPAKLAG 398 >ref|YP_001630006.1| chloromuconate cycloisomerase [Bordetella petrii DSM 12804] emb|CAP41736.1| chloromuconate cycloisomerase [Bordetella petrii] Length = 406 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 337/386 (87%), Positives = 362/386 (93%), Gaps = 1/386 (0%) Query: 20 SMDTPQHLHA-AAPALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGTVGVG 78 +M+ Q AAPALI+RVETFL+DLPTIRPHQLSM TMNGQTLM+VRLYCSDGTVGVG Sbjct: 8 AMENTQRFQVCAAPALIERVETFLLDLPTIRPHQLSMVTMNGQTLMIVRLYCSDGTVGVG 67 Query: 79 EGTTIGGLAYGAESPEGMKLAIDTYFAPLLLGADASLIPAIMARLNKAIQDNRFAKCAIE 138 EGTTIGGLAYGAESPEGM+LAIDTYFAPLL+GADAS +PAIMARLNKAI DNRFAKCA+E Sbjct: 68 EGTTIGGLAYGAESPEGMQLAIDTYFAPLLIGADASHVPAIMARLNKAIHDNRFAKCAVE 127 Query: 139 TALFDALGQRTGLPVSQLLGGRARESLPIAWTLASGDTAKDIDEAERMLAARRHKIFKLK 198 TALFDALGQRTGLPVSQLLGGR R+SLP+AWTLASGDTAKDIDEAERMLA RRH IFKLK Sbjct: 128 TALFDALGQRTGLPVSQLLGGRVRDSLPVAWTLASGDTAKDIDEAERMLAQRRHNIFKLK 187 Query: 199 IGRREVEADVAHVAAIKKALGDRGSVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVAS 258 IGRR V+ADVAHVAAIKKALG+RG+VRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVA Sbjct: 188 IGRRAVDADVAHVAAIKKALGNRGAVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVAC 247 Query: 259 APALARLKGKHAIAIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGD 318 A A+ARLKG+ AIA+MADESLTGPASAFALAR+ GADVFA+K EQSGGLRAAQQVAAI D Sbjct: 248 ADAMARLKGRFAIAVMADESLTGPASAFALARVAGADVFAVKTEQSGGLRAAQQVAAIAD 307 Query: 319 AAGIELYGGTMLEGAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLA 378 AAGIELYGGTMLEGAIGTIASAHAFA+FR+LQWGTELFGPLLLTEEILA+PLQY DFQLA Sbjct: 308 AAGIELYGGTMLEGAIGTIASAHAFASFRDLQWGTELFGPLLLTEEILAQPLQYTDFQLA 367 Query: 379 IPNRPGLGIVLDEERVQYFRRDRKQG 404 +P PGLGI LDE+RVQ+FRRDRKQG Sbjct: 368 VPTGPGLGIALDEDRVQFFRRDRKQG 393 >ref|YP_004127270.1| muconate and chloromuconate cycloisomerase [Alicycliphilus denitrificans BC] gb|ADV00383.1| muconate and chloromuconate cycloisomerase [Alicycliphilus denitrificans BC] Length = 391 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 302/386 (78%), Positives = 342/386 (88%), Gaps = 2/386 (0%) Query: 18 MQSMDTPQHLHAAAPALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGTVGV 77 MQ+ PQH + ID+VET L+DLPTIRPH+LSMATMNGQTLMLVR+ CSDGTVG+ Sbjct: 1 MQNPLRPQH--STGSVTIDQVETLLLDLPTIRPHKLSMATMNGQTLMLVRVRCSDGTVGI 58 Query: 78 GEGTTIGGLAYGAESPEGMKLAIDTYFAPLLLGADASLIPAIMARLNKAIQDNRFAKCAI 137 GEGTTIGGLAYGAESPEGMKLAIDTYFAP ++GADA+ +PA+MARLN+AI+DNRFAKCA+ Sbjct: 59 GEGTTIGGLAYGAESPEGMKLAIDTYFAPQMVGADANRVPALMARLNQAIRDNRFAKCAV 118 Query: 138 ETALFDALGQRTGLPVSQLLGGRARESLPIAWTLASGDTAKDIDEAERMLAARRHKIFKL 197 ETAL+DALG RTGLPVS+LLGGR R+ LP+AWTLASGDT +DI+EA+RML RRH+IFKL Sbjct: 119 ETALYDALGHRTGLPVSELLGGRLRDRLPVAWTLASGDTGRDIEEAQRMLETRRHQIFKL 178 Query: 198 KIGRREVEADVAHVAAIKKALGDRGSVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVA 257 KIGR+ V DVAHVAAIKKALGD SVRVDVNMAWSEL+A GLAGLV AGCELVEQPVA Sbjct: 179 KIGRKPVRDDVAHVAAIKKALGDLASVRVDVNMAWSELQAHHGLAGLVHAGCELVEQPVA 238 Query: 258 SAPALARLKGKHAIAIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIG 317 SA LARLKG++ IA+MADESLTGPASAF LA++ GADVFAIK EQSGGLRAAQQVAAI Sbjct: 239 SADVLARLKGRYPIAVMADESLTGPASAFGLAQVAGADVFAIKTEQSGGLRAAQQVAAIA 298 Query: 318 DAAGIELYGGTMLEGAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQL 377 DAA IELYGGTMLEG +GTIASAH F+TFRELQWGTELFGPLLLTEEILA PL+Y+DF L Sbjct: 299 DAAHIELYGGTMLEGGVGTIASAHVFSTFRELQWGTELFGPLLLTEEILATPLEYKDFHL 358 Query: 378 AIPNRPGLGIVLDEERVQYFRRDRKQ 403 +P PGLGI LDE+RV++FRRDR++ Sbjct: 359 TVPAAPGLGIALDEDRVRHFRRDRQR 384 >ref|ZP_03583407.1| muconate cycloisomerase [Burkholderia multivorans CGD1] gb|EEE01850.1| muconate cycloisomerase [Burkholderia multivorans CGD1] Length = 378 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 260/369 (70%), Positives = 305/369 (82%) Query: 32 PALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGTVGVGEGTTIGGLAYGAE 91 P I+R+ET LVDLPTIRPH+LS+ATM+GQTLMLV+++CSDG G+GEGTTI G+AYG E Sbjct: 3 PITIERIETRLVDLPTIRPHKLSVATMHGQTLMLVKVFCSDGVTGIGEGTTIAGMAYGPE 62 Query: 92 SPEGMKLAIDTYFAPLLLGADASLIPAIMARLNKAIQDNRFAKCAIETALFDALGQRTGL 151 SPE MKLAIDTYFAP ++G DA+ I A+MA + K ++ N FAK A+ETAL DA G+R G+ Sbjct: 63 SPEAMKLAIDTYFAPAMIGRDATRIQALMAYVGKLVKVNHFAKSALETALLDAHGKRLGV 122 Query: 152 PVSQLLGGRARESLPIAWTLASGDTAKDIDEAERMLAARRHKIFKLKIGRREVEADVAHV 211 PVS+LLGGR RE LP+AWTLASGDTA+DIDEAE ML RRH +FKLKIG + ++AD+ HV Sbjct: 123 PVSELLGGRRRERLPVAWTLASGDTARDIDEAEHMLDVRRHNVFKLKIGAKALDADIRHV 182 Query: 212 AAIKKALGDRGSVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVASAPALARLKGKHAI 271 AAIKKALGDR +VRVDVNMAWSE +A R L L DAGCELVEQPVASA ALARL + + Sbjct: 183 AAIKKALGDRAAVRVDVNMAWSETQAARALPALADAGCELVEQPVASAAALARLMRRFPV 242 Query: 272 AIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGDAAGIELYGGTMLE 331 A+MADE L GP SAF +A+ GADVFAIKIEQSGGL AAQ+VA I DAAGIELYGGTMLE Sbjct: 243 ALMADEILQGPDSAFDIAKQHGADVFAIKIEQSGGLFAAQRVATIADAAGIELYGGTMLE 302 Query: 332 GAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLAIPNRPGLGIVLDE 391 GA+ T+ASAH FA+F LQWGTELFGPLL+TEEILA PL Y DF+L +P+ PGLGI LD+ Sbjct: 303 GAVSTVASAHLFASFANLQWGTELFGPLLITEEILATPLDYSDFELTVPSGPGLGIELDD 362 Query: 392 ERVQYFRRD 400 E+V F RD Sbjct: 363 EKVARFTRD 371 >ref|YP_001583211.1| muconate and chloromuconate cycloisomerase [Burkholderia multivorans ATCC 17616] ref|YP_001949664.1| muconate cycloisomerase [Burkholderia multivorans ATCC 17616] gb|ABX16919.1| muconate and chloromuconate cycloisomerase [Burkholderia multivorans ATCC 17616] dbj|BAG47128.1| muconate cycloisomerase [Burkholderia multivorans ATCC 17616] Length = 378 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 259/369 (70%), Positives = 304/369 (82%) Query: 32 PALIDRVETFLVDLPTIRPHQLSMATMNGQTLMLVRLYCSDGTVGVGEGTTIGGLAYGAE 91 P I+R+ET LVDLPTIRPH+LS+ATM+GQTLMLV+++CSDG G+GEGTTI G+AYG E Sbjct: 3 PITIERIETRLVDLPTIRPHKLSVATMHGQTLMLVKVFCSDGVTGIGEGTTIAGMAYGPE 62 Query: 92 SPEGMKLAIDTYFAPLLLGADASLIPAIMARLNKAIQDNRFAKCAIETALFDALGQRTGL 151 SPE MKLAIDTYFAP ++G DA+ I A+MA + K ++ N FAK A+E AL DA G+R G+ Sbjct: 63 SPEAMKLAIDTYFAPAMIGRDATRIQALMAHVGKLVKVNHFAKSALEMALLDAHGKRLGV 122 Query: 152 PVSQLLGGRARESLPIAWTLASGDTAKDIDEAERMLAARRHKIFKLKIGRREVEADVAHV 211 PVS+LLGGR RE LP+AWTLASGDTA+DIDEAE ML RRH +FKLKIG + ++AD+ HV Sbjct: 123 PVSELLGGRRRERLPVAWTLASGDTARDIDEAEHMLDVRRHNVFKLKIGAKALDADIRHV 182 Query: 212 AAIKKALGDRGSVRVDVNMAWSELEAQRGLAGLVDAGCELVEQPVASAPALARLKGKHAI 271 AAIKKALGDR +VRVDVNMAWSE +A R L L DAGCELVEQPVASA ALARL + + Sbjct: 183 AAIKKALGDRAAVRVDVNMAWSETQAARALPALADAGCELVEQPVASAAALARLMRRFPV 242 Query: 272 AIMADESLTGPASAFALARIGGADVFAIKIEQSGGLRAAQQVAAIGDAAGIELYGGTMLE 331 A+MADE L GP SAF +A+ GADVFAIKIEQSGGL AAQ+VA I DAAGIELYGGTMLE Sbjct: 243 ALMADEILQGPDSAFDIAKQHGADVFAIKIEQSGGLFAAQRVATIADAAGIELYGGTMLE 302 Query: 332 GAIGTIASAHAFATFRELQWGTELFGPLLLTEEILAEPLQYQDFQLAIPNRPGLGIVLDE 391 GA+ T+ASAH FA+F LQWGTELFGPLL+TEEILA PL Y DF+L +P+ PGLGI LD+ Sbjct: 303 GAVSTVASAHLFASFANLQWGTELFGPLLITEEILATPLDYSDFELTVPSGPGLGIELDD 362 Query: 392 ERVQYFRRD 400 E+V F RD Sbjct: 363 EKVARFTRD 371